MC07g0274 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0274
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Defensin-like (DEFL) family protein
Location	MC07: 9548418 .. 9548510 (-)
RNA-Seq Expression	MC07g0274
Synteny	MC07g0274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGGAAGTGTTGGACTTTTTGCATTTCTGGATGGGAAAAAGGAGGTTTCTGCAAGCAAGTTGACCATGAGCATATTTGTCATTACTATTGT

mRNA sequence

GATGGGAAGTGTTGGACTTTTTGCATTTCTGGATGGGAAAAAGGAGGTTTCTGCAAGCAAGTTGACCATGAGCATATTTGTCATTACTATTGT

Coding sequence (CDS)

GATGGGAAGTGTTGGACTTTTTGCATTTCTGGATGGGAAAAAGGAGGTTTCTGCAAGCAAGTTGACCATGAGCATATTTGTCATTACTATTGT

Protein sequence

DGKCWTFCISGWEKGGFCKQVDHEHICHYYC

Homology

[Close]

BLAST of MC07g0274 vs. ExPASy Swiss-Prot
Match: Q2V2S1 (Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-08
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 32
          DGKCW FCI G E GGFCK  +H+HICH  C
Sbjct: 58 DGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of MC07g0274 vs. ExPASy Swiss-Prot
Match: P0CAX9 (Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.7e-07
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 0


Query: 2  GKCWTFCISGWEKGGFCKQVDHEHICHYYC 32
          GKCW FCI G E GGFCK   H+HICH  C
Sbjct: 63 GKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

[Close]

BLAST of MC07g0274 vs. NCBI nr
Match: XP_006414747.1 (defensin-like protein 21 [Eutrema salsugineum] >ESQ56200.1 hypothetical protein EUTSA_v10026987mg [Eutrema salsugineum])

HSP 1 Score: 59.7 bits (143), Expect = 2.63e-10
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G EKGGFCK   H+H+CH +C
Sbjct: 62 DGKCWKFCVEGCEKGGFCKLFGHKHVCHCFC 92

[Close]

BLAST of MC07g0274 vs. NCBI nr
Match: XP_006285438.1 (defensin-like protein 21 [Capsella rubella] >EOA18336.1 hypothetical protein CARUB_v10006855mg [Capsella rubella])

HSP 1 Score: 58.5 bits (140), Expect = 8.06e-10
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G E+GGFCK+   +HICH YC
Sbjct: 63 DGKCWKFCVEGCERGGFCKRFGRKHICHCYC 93

[Close]

BLAST of MC07g0274 vs. NCBI nr
Match: XP_006285762.1 (defensin-like protein 21 [Capsella rubella] >EOA18660.1 hypothetical protein CARUB_v10007236mg [Capsella rubella])

HSP 1 Score: 58.2 bits (139), Expect = 1.12e-09
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G E+GGFCK  + +HICH YC
Sbjct: 62 DGKCWKFCVEGCERGGFCKLFEKKHICHCYC 92

[Close]

BLAST of MC07g0274 vs. NCBI nr
Match: NP_001032063.1 (Defensin-like (DEFL) family protein [Arabidopsis thaliana] >Q2V2S1.1 RecName: Full=Putative defensin-like protein 20; Flags: Precursor [Arabidopsis thaliana] >AED96240.1 Defensin-like (DEFL) family protein [Arabidopsis thaliana])

HSP 1 Score: 57.4 bits (137), Expect = 2.04e-09
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FCI G E GGFCK  +H+HICH  C
Sbjct: 58 DGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of MC07g0274 vs. NCBI nr
Match: XP_019087725.1 (PREDICTED: putative defensin-like protein 20 [Camelina sativa])

HSP 1 Score: 57.0 bits (136), Expect = 2.76e-09
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW +C+ G E+GGFCK   ++HICH YC
Sbjct: 58 DGKCWKYCVEGCERGGFCKPFGNKHICHCYC 88

[Close]

BLAST of MC07g0274 vs. ExPASy TrEMBL
Match: V4LZU0 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026987mg PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.27e-10
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G EKGGFCK   H+H+CH +C
Sbjct: 62 DGKCWKFCVEGCEKGGFCKLFGHKHVCHCFC 92

[Close]

BLAST of MC07g0274 vs. ExPASy TrEMBL
Match: R0F9I9 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10006855mg PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.90e-10
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G E+GGFCK+   +HICH YC
Sbjct: 63 DGKCWKFCVEGCERGGFCKRFGRKHICHCYC 93

[Close]

BLAST of MC07g0274 vs. ExPASy TrEMBL
Match: R0H1Y0 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10007236mg PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.41e-10
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW FC+ G E+GGFCK  + +HICH YC
Sbjct: 62 DGKCWKFCVEGCERGGFCKLFEKKHICHCYC 92

[Close]

BLAST of MC07g0274 vs. ExPASy TrEMBL
Match: A0A5D3CFQ3 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003350 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.53e-09
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DGKCW  CI+G EKGGFCKQ+  +++CH YC
Sbjct: 49 DGKCWLHCIAGCEKGGFCKQLTDKNVCHCYC 79

[Close]

BLAST of MC07g0274 vs. ExPASy TrEMBL
Match: A0A5D3CG20 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003370 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.58e-09
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 31
          DG+CW  CI G EKGGFCK+V  +H+CH YC
Sbjct: 65 DGRCWRRCIGGCEKGGFCKRVGRKHVCHCYC 95

[Close]

BLAST of MC07g0274 vs. TAIR 10
Match: AT5G52605.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-09
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 0


Query: 1  DGKCWTFCISGWEKGGFCKQVDHEHICHYYC 32
          DGKCW FCI G E GGFCK  +H+HICH  C
Sbjct: 58 DGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of MC07g0274 vs. TAIR 10
Match: AT4G14276.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-08
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 0


Query: 2  GKCWTFCISGWEKGGFCKQVDHEHICHYYC 32
          GKCW FCI G E GGFCK   H+HICH  C
Sbjct: 63 GKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

The following BLAST results are available for this feature:

BLAST of MC07g0274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V2S1	3.4e-08	67.74	Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 P...	[more]
P0CAX9	3.7e-07	66.67	Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1	[more]

BLAST of MC07g0274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_006414747.1	2.63e-10	64.52	defensin-like protein 21 [Eutrema salsugineum] >ESQ56200.1 hypothetical protein ...	[more]
XP_006285438.1	8.06e-10	64.52	defensin-like protein 21 [Capsella rubella] >EOA18336.1 hypothetical protein CAR...	[more]
XP_006285762.1	1.12e-09	64.52	defensin-like protein 21 [Capsella rubella] >EOA18660.1 hypothetical protein CAR...	[more]
NP_001032063.1	2.04e-09	67.74	Defensin-like (DEFL) family protein [Arabidopsis thaliana] >Q2V2S1.1 RecName: Fu...	[more]
XP_019087725.1	2.76e-09	61.29	PREDICTED: putative defensin-like protein 20 [Camelina sativa]	[more]

BLAST of MC07g0274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
V4LZU0	1.27e-10	64.52	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026987mg PE=...	[more]
R0F9I9	3.90e-10	64.52	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10006855mg PE=3 S...	[more]
R0H1Y0	5.41e-10	64.52	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10007236mg PE=3 S...	[more]
A0A5D3CFQ3	1.53e-09	64.52	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CG20	1.58e-09	64.52	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MC07g0274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52605.1	2.4e-09	67.74	Defensin-like (DEFL) family protein	[more]
AT4G14276.1	2.6e-08	66.67	Defensin-like (DEFL) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022618	Defensin-like protein 20-27	PFAM	PF10868	Defensin_like	coord: 1..31 e-value: 1.5E-7 score: 32.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0274.1	MC07g0274.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005576	extracellular region