MC07g0271 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0271
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Defensin-like (DEFL) family protein
Location	MC07: 9421488 .. 9421640 (+)
RNA-Seq Expression	MC07g0271
Synteny	MC07g0271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGTTGCAATAATCATCCTAAATTGGGCACTTTCAAACCTGGAATAGATGACAGGCAAGACGATGGGAAGTGTTGGAGTTTTTGCATTTCTGGATGTAGAGGAGGTTTCTGCAAGCAAGTTGGCAATAAACATATTTGTCATTGCTATTGT

mRNA sequence

TTGTGTTGCAATAATCATCCTAAATTGGGCACTTTCAAACCTGGAATAGATGACAGGCAAGACGATGGGAAGTGTTGGAGTTTTTGCATTTCTGGATGTAGAGGAGGTTTCTGCAAGCAAGTTGGCAATAAACATATTTGTCATTGCTATTGT

Coding sequence (CDS)

TTGTGTTGCAATAATCATCCTAAATTGGGCACTTTCAAACCTGGAATAGATGACAGGCAAGACGATGGGAAGTGTTGGAGTTTTTGCATTTCTGGATGTAGAGGAGGTTTCTGCAAGCAAGTTGGCAATAAACATATTTGTCATTGCTATTGT

Protein sequence

LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGCRGGFCKQVGNKHICHCYC

Homology

[Close]

BLAST of MC07g0271 vs. ExPASy Swiss-Prot
Match: Q2V2S1 (Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-14
Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGI-DDRQDDGKCWSFCISGCR-GGFCKQVGNKHICHCYC 52
          +CC  HP +G   PGI DD + DGKCW FCI GC  GGFCK   +KHICHC C
Sbjct: 36 ICCKEHPSVGRCLPGIDDDAEKDGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of MC07g0271 vs. ExPASy Swiss-Prot
Match: P0CAX9 (Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.8e-14
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDD-RQDDGKCWSFCISGCR-GGFCKQVGNKHICHCYC 52
          +CC  HP +G   P IDD  +  GKCW FCI GC  GGFCK  G+KHICHC C
Sbjct: 40 ICCKEHPSVGRCLPNIDDSAEKGGKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

[Close]

BLAST of MC07g0271 vs. ExPASy Swiss-Prot
Match: Q2V391 (Defensin-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=At5g08315 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-09
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC---RGGFCKQVGNKHICHCYC 52
          LCCNNHPK G      + + DD +C S+C++GC   +GG+CK + +   CHCYC
Sbjct: 33 LCCNNHPKFGK----CNTKNDDQRCNSWCLNGCDNGKGGYCKSMSHGGQCHCYC 82

[Close]

BLAST of MC07g0271 vs. NCBI nr
Match: XP_019087725.1 (PREDICTED: putative defensin-like protein 20 [Camelina sativa])

HSP 1 Score: 92.4 bits (228), Expect = 6.58e-23
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQD-DGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   PGIDD+ D DGKCW +C+ GC RGGFCK  GNKHICHCYC
Sbjct: 36 ICCREHPSLGRCLPGIDDKADNDGKCWKYCVEGCERGGFCKPFGNKHICHCYC 88

[Close]

BLAST of MC07g0271 vs. NCBI nr
Match: XP_010450072.1 (PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010450073.1 PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010497033.1 PREDICTED: putative defensin-like protein 20 [Camelina sativa])

HSP 1 Score: 92.0 bits (227), Expect = 1.04e-22
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQD-DGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   PGIDD+ D DGKCW +C+ GC RGGFCK  GNKHICHCYC
Sbjct: 40 ICCREHPSLGRCLPGIDDKADNDGKCWKYCVEGCERGGFCKLFGNKHICHCYC 92

[Close]

BLAST of MC07g0271 vs. NCBI nr
Match: XP_006285438.1 (defensin-like protein 21 [Capsella rubella] >EOA18336.1 hypothetical protein CARUB_v10006855mg [Capsella rubella])

HSP 1 Score: 91.3 bits (225), Expect = 2.29e-22
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQD-DGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   PGIDD  D DGKCW FC+ GC RGGFCK+ G KHICHCYC
Sbjct: 41 ICCREHPSLGRCLPGIDDNPDKDGKCWKFCVEGCERGGFCKRFGRKHICHCYC 93

[Close]

BLAST of MC07g0271 vs. NCBI nr
Match: TYK10191.1 (putative defensin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 4.32e-22
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1   LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
           LCCNNHP+LG+ +PG+DD  D GKCW  CI+GC +GGFCKQ+ NK++CHCYC
Sbjct: 81  LCCNNHPELGSCEPGVDDASD-GKCWLHCIAGCEKGGFCKQLSNKNVCHCYC 131

[Close]

BLAST of MC07g0271 vs. NCBI nr
Match: TYK10190.1 (putative defensin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.21e-21
Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          LCCNNHP+LG+ +PG+DD  D GKCW  CI+GC +GGFCKQ+ +K++CHCYC
Sbjct: 29 LCCNNHPELGSCEPGVDDASD-GKCWLHCIAGCEKGGFCKQLTDKNVCHCYC 79

[Close]

BLAST of MC07g0271 vs. ExPASy TrEMBL
Match: R0F9I9 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10006855mg PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.11e-22
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQD-DGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   PGIDD  D DGKCW FC+ GC RGGFCK+ G KHICHCYC
Sbjct: 41 ICCREHPSLGRCLPGIDDNPDKDGKCWKFCVEGCERGGFCKRFGRKHICHCYC 93

[Close]

BLAST of MC07g0271 vs. ExPASy TrEMBL
Match: A0A5D3CEJ1 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003360 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.09e-22
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1   LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
           LCCNNHP+LG+ +PG+DD  D GKCW  CI+GC +GGFCKQ+ NK++CHCYC
Sbjct: 81  LCCNNHPELGSCEPGVDDASD-GKCWLHCIAGCEKGGFCKQLSNKNVCHCYC 131

[Close]

BLAST of MC07g0271 vs. ExPASy TrEMBL
Match: A0A5D3CFQ3 (Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003350 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.86e-22
Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          LCCNNHP+LG+ +PG+DD  D GKCW  CI+GC +GGFCKQ+ +K++CHCYC
Sbjct: 29 LCCNNHPELGSCEPGVDDASD-GKCWLHCIAGCEKGGFCKQLTDKNVCHCYC 79

[Close]

BLAST of MC07g0271 vs. ExPASy TrEMBL
Match: R0H1Y0 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10007236mg PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.11e-21
Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQD-DGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   PGIDD  D DGKCW FC+ GC RGGFCK    KHICHCYC
Sbjct: 40 ICCREHPSLGRCLPGIDDNADKDGKCWKFCVEGCERGGFCKLFEKKHICHCYC 92

[Close]

BLAST of MC07g0271 vs. ExPASy TrEMBL
Match: D7MH45 (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_915457 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.39e-20
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDR-QDDGKCWSFCISGC-RGGFCKQVGNKHICHCYC 51
          +CC  HP LG   P IDD+ ++DGKCW FC+  C RGG+CK  GNKHICHCYC
Sbjct: 40 ICCREHPSLGRCLPNIDDKAENDGKCWKFCVEECERGGYCKLFGNKHICHCYC 92

[Close]

BLAST of MC07g0271 vs. TAIR 10
Match: AT5G52605.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-15
Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGI-DDRQDDGKCWSFCISGCR-GGFCKQVGNKHICHCYC 52
          +CC  HP +G   PGI DD + DGKCW FCI GC  GGFCK   +KHICHC C
Sbjct: 36 ICCKEHPSVGRCLPGIDDDAEKDGKCWKFCIEGCETGGFCKLFEHKHICHCNC 88

[Close]

BLAST of MC07g0271 vs. TAIR 10
Match: AT4G14276.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 76.6 bits (187), Expect = 6.3e-15
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDD-RQDDGKCWSFCISGCR-GGFCKQVGNKHICHCYC 52
          +CC  HP +G   P IDD  +  GKCW FCI GC  GGFCK  G+KHICHC C
Sbjct: 40 ICCKEHPSVGRCLPNIDDSAEKGGKCWKFCIEGCETGGFCKLFGHKHICHCNC 92

[Close]

BLAST of MC07g0271 vs. TAIR 10
Match: AT5G08315.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-10
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 1  LCCNNHPKLGTFKPGIDDRQDDGKCWSFCISGC---RGGFCKQVGNKHICHCYC 52
          LCCNNHPK G      + + DD +C S+C++GC   +GG+CK + +   CHCYC
Sbjct: 33 LCCNNHPKFGK----CNTKNDDQRCNSWCLNGCDNGKGGYCKSMSHGGQCHCYC 82

[Close]

BLAST of MC07g0271 vs. TAIR 10
Match: AT4G14272.1 (Defensin-like (DEFL) family protein )

HSP 1 Score: 40.0 bits (92), Expect = 6.5e-04
Identity = 17/43 (39.53%), Postives = 22/43 (51.16%), Query Frame = 0


Query: 2  CCNNHPKLGTFKPGIDDR-QDDGKCWSFCISGCRGGFCKQVGN 44
          C   H ++G    GIDD  Q+DGKCW FC+   +     Q  N
Sbjct: 39 CNREHSEIGICLSGIDDDIQNDGKCWKFCLMVAKAEVIMQTNN 81

The following BLAST results are available for this feature:

BLAST of MC07g0271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V2S1	2.3e-14	60.38	Putative defensin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=At5g52605 P...	[more]
P0CAX9	8.8e-14	58.49	Defensin-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=At4g14276 PE=2 SV=1	[more]
Q2V391	2.9e-09	46.30	Defensin-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=At5g08315 PE=2 SV=1	[more]

BLAST of MC07g0271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_019087725.1	6.58e-23	67.92	PREDICTED: putative defensin-like protein 20 [Camelina sativa]	[more]
XP_010450072.1	1.04e-22	67.92	PREDICTED: putative defensin-like protein 20 [Camelina sativa] >XP_010450073.1 P...	[more]
XP_006285438.1	2.29e-22	67.92	defensin-like protein 21 [Capsella rubella] >EOA18336.1 hypothetical protein CAR...	[more]
TYK10191.1	4.32e-22	67.31	putative defensin-like protein 20 [Cucumis melo var. makuwa]	[more]
TYK10190.1	1.21e-21	65.38	putative defensin-like protein 20 [Cucumis melo var. makuwa]	[more]

BLAST of MC07g0271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
R0F9I9	1.11e-22	67.92	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10006855mg PE=3 S...	[more]
A0A5D3CEJ1	2.09e-22	67.31	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CFQ3	5.86e-22	65.38	Putative defensin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
R0H1Y0	5.11e-21	66.04	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10007236mg PE=3 S...	[more]
D7MH45	1.39e-20	62.26	Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRA...	[more]

BLAST of MC07g0271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52605.1	1.7e-15	60.38	Defensin-like (DEFL) family protein	[more]
AT4G14276.1	6.3e-15	58.49	Defensin-like (DEFL) family protein	[more]
AT5G08315.1	2.1e-10	46.30	Defensin-like (DEFL) family protein	[more]
AT4G14272.1	6.5e-04	39.53	Defensin-like (DEFL) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022618	Defensin-like protein 20-27	PFAM	PF10868	Defensin_like	coord: 1..51 e-value: 1.7E-16 score: 60.6
IPR022618	Defensin-like protein 20-27	PANTHER	PTHR34453	DEFENSIN-LIKE (DEFL) FAMILY PROTEIN-RELATED	coord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0271.1	MC07g0271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005576	extracellular region