MC07g0227 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0227
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGlutamate--tRNA ligase
LocationMC07: 6843322 .. 6843516 (-)
RNA-Seq ExpressionMC07g0227
SyntenyMC07g0227
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCTACTCATAGATTGGGTTGCCTGCCAACTTTGTTTTGAGAGGCCCATCAAGACAAAGCTGTTATTCCTTTATGGGGAACAAAGCACGCAGAAGACACTCGTTTTTAACTTCCTATCA

mRNA sequence

CCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCTACTCATAGATTGGGTTGCCTGCCAACTTTGTTTTGAGAGGCCCATCAAGACAAAGCTGTTATTCCTTTATGGGGAACAAAGCACGCAGAAGACACTCGTTTTTAACTTCCTATCA

Coding sequence (CDS)

CCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGAGAAGTACCTACTCATAGATTGGGTTGCCTGCCAACTTTGTTTTGAGAGGCCCATCAAGACAAAGCTGTTATTCCTTTATGGGGAACAAAGCACGCAGAAGACACTCGTTTTTAACTTCCTATCA

Protein sequence

PERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVFNFLS
Homology
BLAST of MC07g0227 vs. NCBI nr
Match: WP_131796645.1 (hypothetical protein [Candidatus Frankia datiscae])

HSP 1 Score: 129 bits (324), Expect = 1.59e-36
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0

Query: 1  PERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLV 60
          PERIQKYLKE+GDPKEYDIEELGEKYLLIDWVACQL FERPIKTKLLFLYGEQSTQKTLV
Sbjct: 30 PERIQKYLKEYGDPKEYDIEELGEKYLLIDWVACQLSFERPIKTKLLFLYGEQSTQKTLV 89

Query: 61 FNFLS 65
          F+FLS
Sbjct: 90 FHFLS 94

BLAST of MC07g0227 vs. NCBI nr
Match: RRT35961.1 (hypothetical protein B296_00028409 [Ensete ventricosum])

HSP 1 Score: 84.0 bits (206), Expect = 1.26e-18
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0

Query: 2  ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
          ER+  YL++HG P+EY IE+L +KY L+DW+A  L F+RPIKTK LFLYG+ + QKTL+F
Sbjct: 17 ERLNAYLQKHGWPEEYSIEQLQDKYYLLDWLATNLIFDRPIKTKQLFLYGKPNAQKTLMF 76

Query: 62 NFLS 65
            LS
Sbjct: 77 EMLS 80

BLAST of MC07g0227 vs. NCBI nr
Match: KUM48328.1 (hypothetical protein ABT39_MTgene5328 [Picea glauca] >QHR88907.1 hypothetical protein Q903MT_gene2926 [Picea sitchensis])

HSP 1 Score: 85.1 bits (209), Expect = 2.20e-18
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0

Query: 2  ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
          ER   Y + HG P+EY+IEEL +KYLL+DW+ACQL F RPIKTK L +YG  + QKT +F
Sbjct: 20 ERFIDYFERHGQPEEYEIEELEDKYLLLDWIACQLSFHRPIKTKQLLIYGVPNMQKTALF 79

Query: 62 NFLS 65
          + LS
Sbjct: 80 HILS 83

BLAST of MC07g0227 vs. NCBI nr
Match: EEF27325.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 85.5 bits (210), Expect = 4.67e-18
Identity = 37/64 (57.81%), Postives = 52/64 (81.25%), Query Frame = 0

Query: 2   ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
           E++ +YL+++  P+EY IEE+ EKYLL+DW+ACQ+  +RPIKTK LF+YG  STQKTL+ 
Sbjct: 151 EKLVEYLRKNNWPEEYSIEEIKEKYLLLDWIACQVIHQRPIKTKQLFIYGPPSTQKTLII 210

Query: 62  NFLS 65
            FL+
Sbjct: 211 GFLA 214

BLAST of MC07g0227 vs. NCBI nr
Match: RWW53351.1 (hypothetical protein BHE74_00040169 [Ensete ventricosum])

HSP 1 Score: 79.7 bits (195), Expect = 2.09e-15
Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 2   ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
           +R   YLK  G P EY I+ELGEKY L+DW+A  L F RPIKTK L LYG  +TQKTL+F
Sbjct: 224 QRFLDYLKLQGWPDEYSIDELGEKYWLLDWLATNLIFRRPIKTKQLMLYGRPNTQKTLMF 283

Query: 62  NFLS 65
             LS
Sbjct: 284 EMLS 287

BLAST of MC07g0227 vs. ExPASy TrEMBL
Match: A0A7N0UNL0 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.12e-21
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 3   RIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVFN 62
           RI  YL+  G+P+EYD+EE+ EK L+IDW+ACQLCF+RP+KTK LF+YGE STQKTL+ +
Sbjct: 213 RIIDYLEAKGNPQEYDVEEIREKSLVIDWIACQLCFKRPLKTKQLFIYGEPSTQKTLLMS 272

Query: 63  FLS 65
           +LS
Sbjct: 273 YLS 275

BLAST of MC07g0227 vs. ExPASy TrEMBL
Match: A0A426X903 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00028409 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.10e-19
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0

Query: 2  ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
          ER+  YL++HG P+EY IE+L +KY L+DW+A  L F+RPIKTK LFLYG+ + QKTL+F
Sbjct: 17 ERLNAYLQKHGWPEEYSIEQLQDKYYLLDWLATNLIFDRPIKTKQLFLYGKPNAQKTLMF 76

Query: 62 NFLS 65
            LS
Sbjct: 77 EMLS 80

BLAST of MC07g0227 vs. ExPASy TrEMBL
Match: A0A101LZZ3 (Uncharacterized protein OS=Picea glauca OX=3330 GN=ABT39_MTgene5328 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.07e-18
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0

Query: 2  ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
          ER   Y + HG P+EY+IEEL +KYLL+DW+ACQL F RPIKTK L +YG  + QKT +F
Sbjct: 20 ERFIDYFERHGQPEEYEIEELEDKYLLLDWIACQLSFHRPIKTKQLLIYGVPNMQKTALF 79

Query: 62 NFLS 65
          + LS
Sbjct: 80 HILS 83

BLAST of MC07g0227 vs. ExPASy TrEMBL
Match: B9T9Z5 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2118790 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.26e-18
Identity = 37/64 (57.81%), Postives = 52/64 (81.25%), Query Frame = 0

Query: 2   ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
           E++ +YL+++  P+EY IEE+ EKYLL+DW+ACQ+  +RPIKTK LF+YG  STQKTL+ 
Sbjct: 151 EKLVEYLRKNNWPEEYSIEEIKEKYLLLDWIACQVIHQRPIKTKQLFIYGPPSTQKTLII 210

Query: 62  NFLS 65
            FL+
Sbjct: 211 GFLA 214

BLAST of MC07g0227 vs. ExPASy TrEMBL
Match: A0A426YMC8 (Gemini_AL1 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00006015 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.01e-15
Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 2   ERIQKYLKEHGDPKEYDIEELGEKYLLIDWVACQLCFERPIKTKLLFLYGEQSTQKTLVF 61
           +R   YLK  G P EY I+ELGEKY L+DW+A  L F RPIKTK L LYG  +TQKTL+F
Sbjct: 224 QRFLDYLKLQGWPDEYSIDELGEKYWLLDWLATNLIFRRPIKTKQLMLYGRPNTQKTLMF 283

Query: 62  NFLS 65
             LS
Sbjct: 284 EMLS 287

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
WP_131796645.11.59e-3695.38hypothetical protein [Candidatus Frankia datiscae][more]
RRT35961.11.26e-1859.38hypothetical protein B296_00028409 [Ensete ventricosum][more]
KUM48328.12.20e-1859.38hypothetical protein ABT39_MTgene5328 [Picea glauca] >QHR88907.1 hypothetical pr... [more]
EEF27325.14.67e-1857.81conserved hypothetical protein [Ricinus communis][more]
RWW53351.12.09e-1560.94hypothetical protein BHE74_00040169 [Ensete ventricosum][more]
Match NameE-valueIdentityDescription
A0A7N0UNL05.12e-2165.08Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
A0A426X9036.10e-1959.38Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00028409 PE=4 SV=1[more]
A0A101LZZ31.07e-1859.38Uncharacterized protein OS=Picea glauca OX=3330 GN=ABT39_MTgene5328 PE=4 SV=1[more]
B9T9Z52.26e-1857.81Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2118790 PE=4 SV=1[more]
A0A426YMC81.01e-1560.94Gemini_AL1 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00006... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0227.1MC07g0227.1mRNA