MC07g0059 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0059
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein of unknown function (DUF 3339)
Location	MC07: 781703 .. 781909 (-)
RNA-Seq Expression	MC07g0059
Synteny	MC07g0059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTGGGGGCCAGTTTTTGTGGCTGTGATACTGTTTGTTTTGCTAACTCCAGGGTTGCTCTTTCAGCTCCCTGGCCATCGCAGGTGCTTGGAGTTTGGCAACTTTCACACCAGTGCCGCTGCCATTCTCGTTCACTCGCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCGTCAAGGTTCACCTCTACATCGGT

mRNA sequence

ATGGCGGATTGGGGGCCAGTTTTTGTGGCTGTGATACTGTTTGTTTTGCTAACTCCAGGGTTGCTCTTTCAGCTCCCTGGCCATCGCAGGTGCTTGGAGTTTGGCAACTTTCACACCAGTGCCGCTGCCATTCTCGTTCACTCGCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCGTCAAGGTTCACCTCTACATCGGT

Coding sequence (CDS)

ATGGCGGATTGGGGGCCAGTTTTTGTGGCTGTGATACTGTTTGTTTTGCTAACTCCAGGGTTGCTCTTTCAGCTCCCTGGCCATCGCAGGTGCTTGGAGTTTGGCAACTTTCACACCAGTGCCGCTGCCATTCTCGTTCACTCGCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCGTCAAGGTTCACCTCTACATCGGT

Protein sequence

MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

Homology

[Close]

BLAST of MC07g0059 vs. NCBI nr
Match: XP_022155443.1 (uncharacterized protein LOC111022585 [Momordica charantia])

HSP 1 Score: 138 bits (348), Expect = 4.07e-41
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          AVKVHLYIG
Sbjct: 61 AVKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. NCBI nr
Match: XP_022960371.1 (uncharacterized protein LOC111461116 [Cucurbita moschata] >XP_023004229.1 uncharacterized protein LOC111497623 [Cucurbita maxima] >XP_023513527.1 uncharacterized protein LOC111778105 [Cucurbita pepo subsp. pepo] >KAG7025376.1 hypothetical protein SDJN02_11871, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134 bits (337), Expect = 1.94e-39
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. NCBI nr
Match: XP_011656810.1 (uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hypothetical protein Csa_005508 [Cucumis sativus])

HSP 1 Score: 133 bits (335), Expect = 4.04e-39
Identity = 64/69 (92.75%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. NCBI nr
Match: XP_022991385.1 (uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785.1 uncharacterized protein LOC111778992 [Cucurbita pepo subsp. pepo] >KAG7014656.1 hypothetical protein SDJN02_24835, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133 bits (335), Expect = 4.04e-39
Identity = 65/69 (94.20%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. NCBI nr
Match: XP_038875875.1 (uncharacterized protein LOC120068234 [Benincasa hispida])

HSP 1 Score: 132 bits (333), Expect = 8.15e-39
Identity = 64/69 (92.75%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAA+I+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. ExPASy TrEMBL
Match: A0A6J1DMZ2 (uncharacterized protein LOC111022585 OS=Momordica charantia OX=3673 GN=LOC111022585 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 1.97e-41
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          AVKVHLYIG
Sbjct: 61 AVKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. ExPASy TrEMBL
Match: A0A6J1KVP8 (uncharacterized protein LOC111497623 OS=Cucurbita maxima OX=3661 GN=LOC111497623 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 9.41e-40
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. ExPASy TrEMBL
Match: A0A6J1H7E6 (uncharacterized protein LOC111461116 OS=Cucurbita moschata OX=3662 GN=LOC111461116 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 9.41e-40
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. ExPASy TrEMBL
Match: A0A6J1JSS9 (uncharacterized protein LOC111488037 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488037 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.95e-39
Identity = 65/69 (94.20%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. ExPASy TrEMBL
Match: A0A0A0KAG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.95e-39
Identity = 64/69 (92.75%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AVKVHLYIG 69
          A+KVHLYIG
Sbjct: 61 AIKVHLYIG 69

[Close]

BLAST of MC07g0059 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 110.5 bits (275), Expect = 5.3e-25
Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          M+DWGPV V VILFV+LTPGLLFQLPG ++ +EFGNF TSA +++VHSLLYF L+CVFLL
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AVKVHLYIG 70
          A+K+H+YIG
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of MC07g0059 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-21
Identity = 45/69 (65.22%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPV VAVILFVLLTPGLLFQ+P   R +EFGN  TS A+ILVH++++FGLI +F +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AVKVHLYIG 70
          A+++H+Y G
Sbjct: 61 AIRLHIYTG 69

[Close]

BLAST of MC07g0059 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 94.7 bits (234), Expect = 3.0e-20
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          MADWGPV +AVILFV+L+PGLLFQ+P   R +EFGN  TS A+ILVH++++FGLI +F +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AVKVHLYIG 70
          A+ VH+Y G
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of MC07g0059 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19
Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLL 60
          M DWGPVFVAV LFVLLTPGLL Q+PG  R +EFG F TS  +++VH+L+YF L+C+ LL
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AVKVHL 67
          A+++H+
Sbjct: 61 ALQIHI 66

[Close]

BLAST of MC07g0059 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 85.5 bits (210), Expect = 1.8e-17
Identity = 39/67 (58.21%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 2  ADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLA 61
          ADWGPV VAV+LFV+L+PGLLFQLP  RR LE GN  TS  +ILVH++L+F +I + ++A
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 VKVHLYI 69
          +++H++I
Sbjct: 64 IQIHIHI 70

The following BLAST results are available for this feature:

BLAST of MC07g0059 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0059 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155443.1	4.07e-41	100.00	uncharacterized protein LOC111022585 [Momordica charantia]	[more]
XP_022960371.1	1.94e-39	95.65	uncharacterized protein LOC111461116 [Cucurbita moschata] >XP_023004229.1 unchar...	[more]
XP_011656810.1	4.04e-39	92.75	uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hypothetical ...	[more]
XP_022991385.1	4.04e-39	94.20	uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785...	[more]
XP_038875875.1	8.15e-39	92.75	uncharacterized protein LOC120068234 [Benincasa hispida]	[more]

BLAST of MC07g0059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMZ2	1.97e-41	100.00	uncharacterized protein LOC111022585 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KVP8	9.41e-40	95.65	uncharacterized protein LOC111497623 OS=Cucurbita maxima OX=3661 GN=LOC111497623...	[more]
A0A6J1H7E6	9.41e-40	95.65	uncharacterized protein LOC111461116 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1JSS9	1.95e-39	94.20	uncharacterized protein LOC111488037 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KAG8	1.95e-39	92.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1	[more]

BLAST of MC07g0059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08391.1	5.3e-25	72.46	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	2.7e-21	65.22	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	3.0e-20	62.32	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	2.0e-19	62.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01940.1	1.8e-17	58.21	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 5.9E-34 score: 116.1
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF62	SUBFAMILY NOT NAMED	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0059.1	MC07g0059.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane