MC07g0051 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0051
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionFcf2 domain-containing protein
LocationMC07: 613980 .. 617577 (-)
RNA-Seq ExpressionMC07g0051
SyntenyMC07g0051
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCCCACATGTTACATTAAAAAAAATAATTTAATCACTGTAATTTGATCGAACTTAATTGTTAATTTTTATTATATAACTATTTAATATTTATAATTTATAAACTCATTTGTTTATCATGAATTTATAAACAACCCTATTAAACCTAAATCGATTCATCTCTCTGCCTCTAGCCGCCGCCGCCGCCTCTACGCTCGCCATCGATATTATCTCTCAGCCTCTGCTCTCGCCGTCGCCGCCTGTTGGGTTTTTTTCTTCCGGTCGACCCGGATTTGGACAAAGCCGGACCGAACCGACCGTGTACACTCCTTTTTCGTTCCTCTCGTTTTGCAGCAGCAACAGAAGAAGCCCTAAAGGCTGAAATCTAGAATTCGCCGACTTCATTTTAGCAGCTCCTCTTGCTCCTTCTCTTGCGTTGCGCCGACGACGACGCCGTCGCCTCATCCTCCCTCTTTCAGTATCAGGTTAGTAATCTATACATTCAATGGCAGTTCTCAACGTAATTATCCTCAAGAAGTCTCTGATTTAGGAACGAAAAAAAAATAAAAATCCTGATCTCCTCTGCCTCTTTGCTCTTCTATTGTCGCTCCTTTAGGCACTGCTGCTCGTTGCATCGCGGCTGTCTCGATAGTGGTAAGTGATCTTCGCTACCTCTCGCAGTATTTATTGAAATTTGTCGAGGCTCGAGACATTTTGGATGAAAGTGAATACTTGATGATAAAAGGGAAGGAGGAACCTACGGATCTCATGTCTGGACTGAAAGGGTTTTTTGTTTTTATTTTGTATTGGTGGTGGGTAGCTCAAATTTTAACATGGGTTGCTGAAAATTGCGTTAGGAGAGCAGTCAAGCTTTATATAAATCTATCAAATTTGTGGTTGGGTCCTTACCTTTTGTACTCTATGTAGAATTTCCTTTCTTTTTGTTCAAATTTACACAGATAGGCAGCATAGCCAATATACAGTAAATTAACAGGTAACAGAAGGCAACCACACACGAAAGCTGATGCTACATTGTTTTCACTTTTCAGTCACTAAATTAATTGATTTGTTGTGCATCAAGCATTTACTGGTAATAATGCTTCCCATATGTTGTAGTTCAAGCTTCTCTTATCAGAATTGGCCGTCTCATCATAAAATCTGTAAAGATAAATTAAATTGGAAAGTTTGCATGCTTGATATGTGACTATAAATTAAATTGGATTTATTGTTTTAAGCAACCAATTACTAGATTTTCTTAATTGGTATGATTCCAGGTGTTGTTCGAATTAGAACTTATTGGATTTTTTTTTAATGTGTTGCAGATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTATATGCCTTTTTTCCATGAAATTTTAATATTTTCAGTTTTACTACTGATTCCTCATACAAGAACAAAATGGTTTTAATTTATTCAAGTATCGATTAACATGCCTTTTTAACTTTTTTGGTGGTGTGGTGCCTTGCTAGCACCACACCAGCAGTTTACTAACCATTGTAGTTGAAGTTCTAATACGTGTACCCTTGTTATTGTAACTAGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGGTGAGACTGCCTTTGATTTACCAACCACTGTACTCATCAGTTTTCTATTCCACATATTTTGGACTGTTATATAGAAACTGGTACCTTTCGCTGTGTATTGAGAGATGTAATCGTGCTAAATTTTTCTGCAAACGTGAGATGGGCAGCACGTGCATGTTCTTTGAATATCTTTGGTTGCAGATCTTCATGAATCTCTATTCTCCTAGATGGCTAGAACTAGTATTACGAATATATATAATTGTTAGATGAATGTAATGTAACAGCCAATTAGAATGCATATATCTATACATTTGATCGGTTAGAGTCATATAGAGAGAGATAATAAAAAAATAAAATAATACATCTTAACGTCCTTCTGTTTTGGATTTCTCGCCGCCCTCTTGTATTCTTTCCTTTGCTCTTTTCATTAAAAGAGATATACAATTTTTATGCCACACGGAACATATGTATCATAGCAGTTCTCGGTTTATTAGTTCTGTATTCTAAGTTGTTGAACCCATGCATTGTGGGGTTCTTGAACTCGATCTTGGCCATCGGAGTGCATATTGGGAGTCTTGAGTAGACTTTTTTTTTCATCATTGAATTTGGGATCATGAAATTCGTAAAAAAAGAATCTTATATATTCAATTGATAAGATAATTTTTACAGGGTGTAATTGAATTGAATGGTTGTTATCGTCTATTCCCTTTGTAAAGGACCTGTTTGATTGACTTTCCTCTCTATTTCTCTTGATGATTATAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGGTTTTGGTTTCTCACAAATATTTCTATTGTAACATAATTTGTAGTGTTAATATTTGCTCTAGATTTATTGTAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGGTTTGACTTATTGTTTTCGACACATGTTAAAAAGTTCAAATTATAATTGTAAAACGATGTGCATATTTTAGGAAGATTTATTTTGCCATTTTTGTGGCAGTAATTTGGACCATCAAACCAGATATAAATCATAGGATAATGACCCCTGAACTTTGATTCATTCTATAATTTTGAAGATTCTTTTGTTTCAAGTTGGAGTATATTTCTTGTGCATTATCTACATTACCTATCAAGCAGTTTGTTCTACACTACACTACTTATATCCTTCGAAAAACCTCTTGCAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAGTGAAGTTGCCTCAAATTTTTGACCAGTAAACCAGATAAACACACTGGATCAAGTAAGTGAGGGCTTCCAACTTGGTTTATTGTGTAGGTTCACCAGAAGCTCTTATATAAATGTTGTATACATCTGGTAGATACTCTGTGGGGTGGGCTGCAAAGAACTATAAGTTAAAAACTTTTTTTGGTTATTGATTTAGTTGTAATAGGAGTAGAAATGCTCTTCAGGTTATTTTATTCAACATGTAACTGATGAAATGTTTATTTGTAACTGAGGAAAACAACAAATTCTTGTCCATCTGGGACTCACTTTTCTTTTTGGAAGTTGATCAACAATAGGTATTAGACATAATTGAAAATTCAGAGAATTATTGGGAA

mRNA sequence

CACCCCACATGTTACATTAAAAAAAATAATTTAATCACTGTAATTTGATCGAACTTAATTGTTAATTTTTATTATATAACTATTTAATATTTATAATTTATAAACTCATTTGTTTATCATGAATTTATAAACAACCCTATTAAACCTAAATCGATTCATCTCTCTGCCTCTAGCCGCCGCCGCCGCCTCTACGCTCGCCATCGATATTATCTCTCAGCCTCTGCTCTCGCCGTCGCCGCCTGTTGGGTTTTTTTCTTCCGGTCGACCCGGATTTGGACAAAGCCGGACCGAACCGACCGTGTACACTCCTTTTTCGTTCCTCTCGTTTTGCAGCAGCAACAGAAGAAGCCCTAAAGGCTGAAATCTAGAATTCGCCGACTTCATTTTAGCAGCTCCTCTTGCTCCTTCTCTTGCGTTGCGCCGACGACGACGCCGTCGCCTCATCCTCCCTCTTTCAGTATCAGGCACTGCTGCTCGTTGCATCGCGGCTGTCTCGATAGTGATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAGTGAAGTTGCCTCAAATTTTTGACCAGTAAACCAGATAAACACACTGGATCAAGTAAGTGAGGGCTTCCAACTTGGTTTATTGTGTAGGTTCACCAGAAGCTCTTATATAAATGTTGTATACATCTGGTAGATACTCTGTGGGGTGGGCTGCAAAGAACTATAAGTTAAAAACTTTTTTTGGTTATTGATTTAGTTGTAATAGGAGTAGAAATGCTCTTCAGGTTATTTTATTCAACATGTAACTGATGAAATGTTTATTTGTAACTGAGGAAAACAACAAATTCTTGTCCATCTGGGACTCACTTTTCTTTTTGGAAGTTGATCAACAATAGGTATTAGACATAATTGAAAATTCAGAGAATTATTGGGAA

Coding sequence (CDS)

ATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAG

Protein sequence

MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKKLNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDKWKIRGRHSRKRAKERRN
Homology
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21
Identity = 58/140 (41.43%), Postives = 89/140 (63.57%), Query Frame = 0

Query: 66  RKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQAS 125
           +K + DTAG +WFDMPA  +T  +++D++LLK+R+ +DPKRHY++ ++KS  +PKYF   
Sbjct: 104 KKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKS--MPKYF--- 163

Query: 126 VLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAG 185
                QVG++VE   DF+S R+  +ERK T+ DELL D     Y K+K  E++       
Sbjct: 164 -----QVGSIVEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQ------- 223

Query: 186 NDKWKIRGRHSR-KRAKERR 205
             K K+ GR  + K+ ++RR
Sbjct: 224 --KSKMSGRKGQYKKLQQRR 224

BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.9e-21
Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0

Query: 53  VPPNNPKK--LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKK 112
           VPP +  K  L K  RK+   TAG  WF M A  +T EL+ DLR LK+R+ +DPKR YKK
Sbjct: 621 VPPYSESKHRLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLRALKMRAGMDPKRFYKK 680

Query: 113 GDSKSKTLPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYR 172
            D      PKYF        QVGT+V++  DF+  R+ KK+RK T+ +ELL+D    ++ 
Sbjct: 681 NDRDG--FPKYF--------QVGTIVDNPADFYHSRIPKKQRKKTIVEELLADSEFRRFN 737

Query: 173 KRKVREI 178
           +RK  EI
Sbjct: 741 RRKYSEI 737

BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.1e-20
Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 0

Query: 53  VPPNNPKK--LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKK 112
           VPP +  K  L K  RK+   TAG  WF M A  MT EL+ DL+ LK+R+ +DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678

Query: 113 GDSKSKTLPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYR 172
            D      PKYF        Q+GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y 
Sbjct: 679 NDRDG--FPKYF--------QIGTIVDNPADFYHSRIPKKQRKRTIVEELLADSEFRRYN 738

Query: 173 KRKVREIEELNRPAGNDKWKIRGRHSRKRAKER 204
           +RK  EI  +   A N      G+  RK+ K R
Sbjct: 739 RRKYSEI--MAEKAAN----AAGKKFRKKKKFR 755

BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 0

Query: 53  VPP--NNPKKLNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKK 112
           VPP   +  KL K  R++   TAG  WF M A  +T EL+ DL+ LK+R+ +DPKR YKK
Sbjct: 629 VPPYSESKYKLQKKRRQERQKTAGDGWFGMKAPELTDELKNDLKALKMRASMDPKRFYKK 688

Query: 113 GDSKSKTLPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYR 172
            D      PKYF        Q+GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y 
Sbjct: 689 NDRDG--FPKYF--------QIGTIVDNPADFYHSRVPKKQRKRTIVEELLADSEFRRYN 748

Query: 173 KRKVREIEELNRPAGNDKWKIRGRHSRKRAKER 204
           +RK  EI  +   A N      G+  RK+ K R
Sbjct: 749 RRKYSEI--MAEKAAN----AAGKKFRKKKKFR 765

BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 0

Query: 70  SDTAGRSWFDMPA--QTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQASVL 129
           SD     WF +P     M  E+++DL L+K R+ +DPKRHYKK   +   +P+ F     
Sbjct: 96  SDKNDNDWFTLPKPDDNMRREVQRDLLLIKHRAALDPKRHYKK---QRWEVPERF----- 155

Query: 130 NIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGND 189
               +GT++E   +F+S R+ +KERK+T+ + L+ D+A  +Y KRK  EI+E +      
Sbjct: 156 ---AIGTIIEDKSEFYSSRMNRKERKSTILETLMGDEASNKYFKRKYNEIQEKSTSGRKA 215

Query: 190 KWKIRGRHSRKR 200
            +K      +KR
Sbjct: 216 HYKKMKEMRKKR 216

BLAST of MC07g0051 vs. NCBI nr
Match: XP_022155405.1 (rRNA-processing protein fcf2 [Momordica charantia])

HSP 1 Score: 378 bits (971), Expect = 6.99e-132
Identity = 197/205 (96.10%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRPAGNDKWKIRGRHSRKRAKERRN
Sbjct: 181 NRPAGNDKWKIRGRHSRKRAKERRN 197

BLAST of MC07g0051 vs. NCBI nr
Match: KAG7025366.1 (fcf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360 bits (923), Expect = 1.86e-124
Identity = 187/205 (91.22%), Postives = 191/205 (93.17%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MS KKPVI LSWEPKL TSSSGIKTK CDKSH Q E+ LVWK N+ELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRSWFDMPAQTMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQAS   IYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEE 
Sbjct: 121 YFQASFY-IYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRGR SRKRAKERRN
Sbjct: 181 NRPGGNDKWKIRGRQSRKRAKERRN 204

BLAST of MC07g0051 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida])

HSP 1 Score: 350 bits (897), Expect = 1.33e-120
Identity = 180/205 (87.80%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MSEKKP+IGLSWEPKL  SSSGI+TK CDKS+ Q E+ LVWKTN+ELVDGLFVPPNNPKK
Sbjct: 1   MSEKKPIIGLSWEPKLPASSSGIRTKACDKSNTQAENGLVWKTNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQV DTAGR+WFDMPAQTMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVRDTAGRNWFDMPAQTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRPAGNDKWKIRGRHSRKRAK+RRN
Sbjct: 181 NRPAGNDKWKIRGRHSRKRAKDRRN 197

BLAST of MC07g0051 vs. NCBI nr
Match: KAG6592956.1 (hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348 bits (894), Expect = 3.82e-120
Identity = 182/205 (88.78%), Postives = 186/205 (90.73%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MS KKPVI LSWEPKL TSSSGIKTK CDKSH Q E+ LVWK N+ELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRSWFDMPAQTMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRGR SRKRAKERRN
Sbjct: 181 NRPGGNDKWKIRGRQSRKRAKERRN 197

BLAST of MC07g0051 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo])

HSP 1 Score: 347 bits (890), Expect = 1.55e-119
Identity = 178/205 (86.83%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MSE+KP+IGLSWEPKL  SSSGIKTKTCDKS+ Q E+ +VWK+N+ELVDGLFVPPNNPKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRG HSRKRAK+RRN
Sbjct: 181 NRPGGNDKWKIRGNHSRKRAKDRRN 197

BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1)

HSP 1 Score: 378 bits (971), Expect = 3.38e-132
Identity = 197/205 (96.10%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRPAGNDKWKIRGRHSRKRAKERRN
Sbjct: 181 NRPAGNDKWKIRGRHSRKRAKERRN 197

BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 7.52e-120
Identity = 178/205 (86.83%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MSE+KP+IGLSWEPKL  SSSGIKTKTCDKS+ Q E+ +VWK+N+ELVDGLFVPPNNPKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRG HSRKRAK+RRN
Sbjct: 181 NRPGGNDKWKIRGNHSRKRAKDRRN 197

BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 7.79e-120
Identity = 181/205 (88.29%), Postives = 186/205 (90.73%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MS KKPVI LSWEPKL TSSSGIKTK CDKSH Q E+ LVWK N+ELVDGLFVPPNNPKK
Sbjct: 2   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPKK 61

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRSWFDMPAQTMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 62  LNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 121

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEE 
Sbjct: 122 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQ 181

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRGR S+KRAKERRN
Sbjct: 182 NRPGGNDKWKIRGRQSQKRAKERRN 198

BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 6.17e-119
Identity = 180/205 (87.80%), Postives = 185/205 (90.24%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MS KKPVI LSWEPKL TSSSGIKTK CDKSH Q  + LVWK N+ELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAGNGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPAQTMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRGR SRKRAKERRN
Sbjct: 181 NRPGGNDKWKIRGRQSRKRAKERRN 197

BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1)

HSP 1 Score: 343 bits (880), Expect = 2.51e-118
Identity = 177/205 (86.34%), Postives = 187/205 (91.22%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60
           MS+ KP+IGLSWEPKL  SSSGIK KTCDKS+ Q E+ LVWK+N+ELVDGLFVPPNNPKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEL 180
           YFQ        VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEE 
Sbjct: 121 YFQ--------VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQ 180

Query: 181 NRPAGNDKWKIRGRHSRKRAKERRN 205
           NRP GNDKWKIRG HSRKRAK+RRN
Sbjct: 181 NRPGGNDKWKIRGHHSRKRAKDRRN 197

BLAST of MC07g0051 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQ---PESSLVWKTNTELVDGLFVPPNN 60
           M+E KP+IGL+WEPKL   S  + TKTC  S  +    ESS +W + +ELVDGL +PPN+
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 61  PKKLNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKT 120
           PKK+NK++RKQ+ DT G +WFDMPA TMTPEL++DL+LLKLR+V+DP  HYKK  S+SK 
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 121 LPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREI 180
             KYF        Q+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EI
Sbjct: 121 AEKYF--------QIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEI 180

Query: 181 EELNRPAGNDKWKIRGRHSRKRAKERRN 206
           EE +R   N KWK +G  +  + K+RRN
Sbjct: 181 EEKSRAVTNKKWKKKGNQTTNK-KQRRN 196

BLAST of MC07g0051 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 0

Query: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQ---PESSLVWKTNTELVDGLFVPPNN 60
           M+E KP+IGL+WEPKL   S  + TKTC  S  +    ESS +W + +ELVDGL +PPN+
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 61  PKKLNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKT 120
           PKK+NK++RKQ+ DT G +WFDMPA TMTPEL++DL+LLKLR+V+DP  HYKK  S+SK 
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 121 LPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREI 180
             KYF        Q+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EI
Sbjct: 121 AEKYF--------QIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEI 180

Query: 181 EELNRPAGNDKWKIRGRHSRKRAKERRN 206
           EE +R   N KWK +G  +  + K+RRN
Sbjct: 181 EEKSRAVTNKKWKKKGNQTTNK-KQRRN 196

BLAST of MC07g0051 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50
Identity = 110/202 (54.46%), Postives = 138/202 (68.32%), Query Frame = 0

Query: 4   KKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKKLNK 63
           K+P+IGL WEPKL   S  +KT +         S     + +ELVDGL +PPN+P+K+NK
Sbjct: 5   KQPLIGLKWEPKLPGLSLDLKTGS-------TRSKTAESSKSELVDGLCLPPNDPRKINK 64

Query: 64  LLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQ 123
           ++RKQ+ DT G +WFDMPA TMTPEL++DL+LLKLR+V+DP  HYKK  S+SK   KYF 
Sbjct: 65  MIRKQLKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYF- 124

Query: 124 ASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRP 183
                  Q+GTV+E + +F+ GRLTKK RKATLADEL+SD     YRKRKVREIEE +R 
Sbjct: 125 -------QIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKTALYRKRKVREIEEKSRA 184

Query: 184 AGNDKWKIRGRHSRKRAKERRN 206
             N KW  +G  S K  K RRN
Sbjct: 185 VTNKKWNKKGNQS-KNTKPRRN 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O428772.7e-2141.43rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Q8R2M27.9e-2144.88Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10... [more]
Q5QJE65.1e-2041.83Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=96... [more]
Q0P5H23.3e-1940.52Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913... [more]
Q120353.5e-1334.85rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
Match NameE-valueIdentityDescription
XP_022155405.16.99e-13296.10rRNA-processing protein fcf2 [Momordica charantia][more]
KAG7025366.11.86e-12491.22fcf2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038876081.11.33e-12087.80rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing... [more]
KAG6592956.13.82e-12088.78hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008459856.11.55e-11986.83PREDICTED: rRNA-processing protein fcf2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1DMD63.38e-13296.10rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4... [more]
A0A1S3CB587.52e-12086.83rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1[more]
A0A6J1KU177.79e-12088.29rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE... [more]
A0A6J1H9T26.17e-11987.80rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 ... [more]
A0A0A0K9M72.51e-11886.34Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT5G30495.22.7e-5656.73Fcf2 pre-rRNA processing protein [more]
AT5G30495.12.7e-5656.73Fcf2 pre-rRNA processing protein [more]
AT1G54770.11.3e-5054.46Fcf2 pre-rRNA processing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 71..173
e-value: 5.0E-33
score: 113.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..205
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 3..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0051.1MC07g0051.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
cellular_component GO:0005730 nucleolus