MC07g0051 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CACCCCACATGTTACATTAAAAAAAATAATTTAATCACTGTAATTTGATCGAACTTAATTGTTAATTTTTATTATATAACTATTTAATATTTATAATTTATAAACTCATTTGTTTATCATGAATTTATAAACAACCCTATTAAACCTAAATCGATTCATCTCTCTGCCTCTAGCCGCCGCCGCCGCCTCTACGCTCGCCATCGATATTATCTCTCAGCCTCTGCTCTCGCCGTCGCCGCCTGTTGGGTTTTTTTCTTCCGGTCGACCCGGATTTGGACAAAGCCGGACCGAACCGACCGTGTACACTCCTTTTTCGTTCCTCTCGTTTTGCAGCAGCAACAGAAGAAGCCCTAAAGGCTGAAATCTAGAATTCGCCGACTTCATTTTAGCAGCTCCTCTTGCTCCTTCTCTTGCGTTGCGCCGACGACGACGCCGTCGCCTCATCCTCCCTCTTTCAGTATCAGGTTAGTAATCTATACATTCAATGGCAGTTCTCAACGTAATTATCCTCAAGAAGTCTCTGATTTAGGAACGAAAAAAAAATAAAAATCCTGATCTCCTCTGCCTCTTTGCTCTTCTATTGTCGCTCCTTTAGGCACTGCTGCTCGTTGCATCGCGGCTGTCTCGATAGTGGTAAGTGATCTTCGCTACCTCTCGCAGTATTTATTGAAATTTGTCGAGGCTCGAGACATTTTGGATGAAAGTGAATACTTGATGATAAAAGGGAAGGAGGAACCTACGGATCTCATGTCTGGACTGAAAGGGTTTTTTGTTTTTATTTTGTATTGGTGGTGGGTAGCTCAAATTTTAACATGGGTTGCTGAAAATTGCGTTAGGAGAGCAGTCAAGCTTTATATAAATCTATCAAATTTGTGGTTGGGTCCTTACCTTTTGTACTCTATGTAGAATTTCCTTTCTTTTTGTTCAAATTTACACAGATAGGCAGCATAGCCAATATACAGTAAATTAACAGGTAACAGAAGGCAACCACACACGAAAGCTGATGCTACATTGTTTTCACTTTTCAGTCACTAAATTAATTGATTTGTTGTGCATCAAGCATTTACTGGTAATAATGCTTCCCATATGTTGTAGTTCAAGCTTCTCTTATCAGAATTGGCCGTCTCATCATAAAATCTGTAAAGATAAATTAAATTGGAAAGTTTGCATGCTTGATATGTGACTATAAATTAAATTGGATTTATTGTTTTAAGCAACCAATTACTAGATTTTCTTAATTGGTATGATTCCAGGTGTTGTTCGAATTAGAACTTATTGGATTTTTTTTTAATGTGTTGCAGATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTATATGCCTTTTTTCCATGAAATTTTAATATTTTCAGTTTTACTACTGATTCCTCATACAAGAACAAAATGGTTTTAATTTATTCAAGTATCGATTAACATGCCTTTTTAACTTTTTTGGTGGTGTGGTGCCTTGCTAGCACCACACCAGCAGTTTACTAACCATTGTAGTTGAAGTTCTAATACGTGTACCCTTGTTATTGTAACTAGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGGTGAGACTGCCTTTGATTTACCAACCACTGTACTCATCAGTTTTCTATTCCACATATTTTGGACTGTTATATAGAAACTGGTACCTTTCGCTGTGTATTGAGAGATGTAATCGTGCTAAATTTTTCTGCAAACGTGAGATGGGCAGCACGTGCATGTTCTTTGAATATCTTTGGTTGCAGATCTTCATGAATCTCTATTCTCCTAGATGGCTAGAACTAGTATTACGAATATATATAATTGTTAGATGAATGTAATGTAACAGCCAATTAGAATGCATATATCTATACATTTGATCGGTTAGAGTCATATAGAGAGAGATAATAAAAAAATAAAATAATACATCTTAACGTCCTTCTGTTTTGGATTTCTCGCCGCCCTCTTGTATTCTTTCCTTTGCTCTTTTCATTAAAAGAGATATACAATTTTTATGCCACACGGAACATATGTATCATAGCAGTTCTCGGTTTATTAGTTCTGTATTCTAAGTTGTTGAACCCATGCATTGTGGGGTTCTTGAACTCGATCTTGGCCATCGGAGTGCATATTGGGAGTCTTGAGTAGACTTTTTTTTTCATCATTGAATTTGGGATCATGAAATTCGTAAAAAAAGAATCTTATATATTCAATTGATAAGATAATTTTTACAGGGTGTAATTGAATTGAATGGTTGTTATCGTCTATTCCCTTTGTAAAGGACCTGTTTGATTGACTTTCCTCTCTATTTCTCTTGATGATTATAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGGTTTTGGTTTCTCACAAATATTTCTATTGTAACATAATTTGTAGTGTTAATATTTGCTCTAGATTTATTGTAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGGTTTGACTTATTGTTTTCGACACATGTTAAAAAGTTCAAATTATAATTGTAAAACGATGTGCATATTTTAGGAAGATTTATTTTGCCATTTTTGTGGCAGTAATTTGGACCATCAAACCAGATATAAATCATAGGATAATGACCCCTGAACTTTGATTCATTCTATAATTTTGAAGATTCTTTTGTTTCAAGTTGGAGTATATTTCTTGTGCATTATCTACATTACCTATCAAGCAGTTTGTTCTACACTACACTACTTATATCCTTCGAAAAACCTCTTGCAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAGTGAAGTTGCCTCAAATTTTTGACCAGTAAACCAGATAAACACACTGGATCAAGTAAGTGAGGGCTTCCAACTTGGTTTATTGTGTAGGTTCACCAGAAGCTCTTATATAAATGTTGTATACATCTGGTAGATACTCTGTGGGGTGGGCTGCAAAGAACTATAAGTTAAAAACTTTTTTTGGTTATTGATTTAGTTGTAATAGGAGTAGAAATGCTCTTCAGGTTATTTTATTCAACATGTAACTGATGAAATGTTTATTTGTAACTGAGGAAAACAACAAATTCTTGTCCATCTGGGACTCACTTTTCTTTTTGGAAGTTGATCAACAATAGGTATTAGACATAATTGAAAATTCAGAGAATTATTGGGAA CACCCCACATGTTACATTAAAAAAAATAATTTAATCACTGTAATTTGATCGAACTTAATTGTTAATTTTTATTATATAACTATTTAATATTTATAATTTATAAACTCATTTGTTTATCATGAATTTATAAACAACCCTATTAAACCTAAATCGATTCATCTCTCTGCCTCTAGCCGCCGCCGCCGCCTCTACGCTCGCCATCGATATTATCTCTCAGCCTCTGCTCTCGCCGTCGCCGCCTGTTGGGTTTTTTTCTTCCGGTCGACCCGGATTTGGACAAAGCCGGACCGAACCGACCGTGTACACTCCTTTTTCGTTCCTCTCGTTTTGCAGCAGCAACAGAAGAAGCCCTAAAGGCTGAAATCTAGAATTCGCCGACTTCATTTTAGCAGCTCCTCTTGCTCCTTCTCTTGCGTTGCGCCGACGACGACGCCGTCGCCTCATCCTCCCTCTTTCAGTATCAGGCACTGCTGCTCGTTGCATCGCGGCTGTCTCGATAGTGATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAGTGAAGTTGCCTCAAATTTTTGACCAGTAAACCAGATAAACACACTGGATCAAGTAAGTGAGGGCTTCCAACTTGGTTTATTGTGTAGGTTCACCAGAAGCTCTTATATAAATGTTGTATACATCTGGTAGATACTCTGTGGGGTGGGCTGCAAAGAACTATAAGTTAAAAACTTTTTTTGGTTATTGATTTAGTTGTAATAGGAGTAGAAATGCTCTTCAGGTTATTTTATTCAACATGTAACTGATGAAATGTTTATTTGTAACTGAGGAAAACAACAAATTCTTGTCCATCTGGGACTCACTTTTCTTTTTGGAAGTTGATCAACAATAGGTATTAGACATAATTGAAAATTCAGAGAATTATTGGGAA ATGTCAGAAAAAAAACCTGTCATTGGCCTCTCATGGGAGCCAAAGCTGGCCACCTCATCATCGGGGATCAAAACTAAGACTTGTGACAAATCTCACATTCAACCAGAAAGTAGTCTTGTTTGGAAAACTAATACGGAGCTTGTGGATGGTTTGTTTGTTCCACCAAACAACCCTAAAAAGTTGAACAAGTTGCTGAGAAAGCAAGTCAGCGACACAGCTGGGAGGAGTTGGTTTGACATGCCGGCACAAACTATGACCCCTGAATTGGAAAAAGATTTGCGTTTGCTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAGAAAGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGCGTTTTAAATATTTATCAGGTGGGAACTGTGGTAGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACCAAGAAGGAGAGGAAAGCAACGCTTGCAGATGAGCTGCTTTCCGACCAGGCCCTCACCCAGTACAGAAAACGAAAAGTTCGAGAAATTGAAGAACTGAATCGACCTGCTGGAAACGATAAGTGGAAAATAAGGGGTCGTCATTCACGGAAACGGGCAAAGGAAAGGAGGAATTAG MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKKLNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQASVLNIYQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDKWKIRGRHSRKRAKERRN Homology
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21 Identity = 58/140 (41.43%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.9e-21 Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 5.1e-20 Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19 Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of MC07g0051 vs. NCBI nr
Match: XP_022155405.1 (rRNA-processing protein fcf2 [Momordica charantia]) HSP 1 Score: 378 bits (971), Expect = 6.99e-132 Identity = 197/205 (96.10%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of MC07g0051 vs. NCBI nr
Match: KAG7025366.1 (fcf2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360 bits (923), Expect = 1.86e-124 Identity = 187/205 (91.22%), Postives = 191/205 (93.17%), Query Frame = 0
BLAST of MC07g0051 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida]) HSP 1 Score: 350 bits (897), Expect = 1.33e-120 Identity = 180/205 (87.80%), Postives = 189/205 (92.20%), Query Frame = 0
BLAST of MC07g0051 vs. NCBI nr
Match: KAG6592956.1 (hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 348 bits (894), Expect = 3.82e-120 Identity = 182/205 (88.78%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of MC07g0051 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo]) HSP 1 Score: 347 bits (890), Expect = 1.55e-119 Identity = 178/205 (86.83%), Postives = 189/205 (92.20%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1) HSP 1 Score: 378 bits (971), Expect = 3.38e-132 Identity = 197/205 (96.10%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1) HSP 1 Score: 347 bits (890), Expect = 7.52e-120 Identity = 178/205 (86.83%), Postives = 189/205 (92.20%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1) HSP 1 Score: 347 bits (890), Expect = 7.79e-120 Identity = 181/205 (88.29%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1) HSP 1 Score: 345 bits (884), Expect = 6.17e-119 Identity = 180/205 (87.80%), Postives = 185/205 (90.24%), Query Frame = 0
BLAST of MC07g0051 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1) HSP 1 Score: 343 bits (880), Expect = 2.51e-118 Identity = 177/205 (86.34%), Postives = 187/205 (91.22%), Query Frame = 0
BLAST of MC07g0051 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56 Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of MC07g0051 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56 Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of MC07g0051 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50 Identity = 110/202 (54.46%), Postives = 138/202 (68.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|