MC07g0043 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0043
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDUF4408 domain-containing protein
LocationMC07: 533810 .. 534202 (-)
RNA-Seq ExpressionMC07g0043
SyntenyMC07g0043
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCCTGTTCGTAGTCGTCAATGTCATCATCGTCTACATCATCGGAGAACGGAAGCTCACTGATGCAAAAGCGTCGTCGGTGAATGTAATGTATGAAGAGTATTGTGCTAAGAGGATGGAGGAGATAAGCATGAGTCATGATGAAGATACGAGGCAATTGATTGAGAAAGTCGTGGAGAAAAAAGAAGAGGAAGAGGTTGATCACACCGTCCACTGCGACGACGGTACCAATGATAGTGAAGAGGAGAAGCAAAGGGAAGAAGAAGAGGATGGTGAGTTTGCCAATGAGGAGCTGAACAAAAGAGCAGAAGCTTTCATTGCAAGAGTTAACATGCAAAGGAGGGTTGAAGCTCTGGAT

mRNA sequence

ATAGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCCTGTTCGTAGTCGTCAATGTCATCATCGTCTACATCATCGGAGAACGGAAGCTCACTGATGCAAAAGCGTCGTCGGTGAATGTAATGTATGAAGAGTATTGTGCTAAGAGGATGGAGGAGATAAGCATGAGTCATGATGAAGATACGAGGCAATTGATTGAGAAAGTCGTGGAGAAAAAAGAAGAGGAAGAGGTTGATCACACCGTCCACTGCGACGACGGTACCAATGATAGTGAAGAGGAGAAGCAAAGGGAAGAAGAAGAGGATGGTGAGTTTGCCAATGAGGAGCTGAACAAAAGAGCAGAAGCTTTCATTGCAAGAGTTAACATGCAAAGGAGGGTTGAAGCTCTGGAT

Coding sequence (CDS)

ATAGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCCTGTTCGTAGTCGTCAATGTCATCATCGTCTACATCATCGGAGAACGGAAGCTCACTGATGCAAAAGCGTCGTCGGTGAATGTAATGTATGAAGAGTATTGTGCTAAGAGGATGGAGGAGATAAGCATGAGTCATGATGAAGATACGAGGCAATTGATTGAGAAAGTCGTGGAGAAAAAAGAAGAGGAAGAGGTTGATCACACCGTCCACTGCGACGACGGTACCAATGATAGTGAAGAGGAGAAGCAAAGGGAAGAAGAAGAGGATGGTGAGTTTGCCAATGAGGAGCTGAACAAAAGAGCAGAAGCTTTCATTGCAAGAGTTAACATGCAAAGGAGGGTTGAAGCTCTGGAT

Protein sequence

IVVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEISMSHDEDTRQLIEKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFIARVNMQRRVEALD
Homology
BLAST of MC07g0043 vs. NCBI nr
Match: KAA0039829.1 (DUF4408 domain-containing protein [Cucumis melo var. makuwa] >TYK24670.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (304), Expect = 8.50e-32
Identity = 74/133 (55.64%), Postives = 103/133 (77.44%), Query Frame = 0

Query: 1   IVVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEIS--MSH 60
           IV+TPPSFFSP CLFV+VN I+VYI+GE+KLT AK++S+N+MY+EY  +R  E+   ++ 
Sbjct: 61  IVITPPSFFSPSCLFVIVNFIVVYIVGEQKLTSAKSASMNIMYDEYYIERTMEMKHYLNP 120

Query: 61  DEDTRQLIEKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFI 120
            E+ +QL+EK VE+KEEE +  ++  D+G +  +    +E E D +FANEELNKRAEAFI
Sbjct: 121 CENMKQLVEKTVEEKEEEGI-GSIDDDNGVDFID----KENEGDCKFANEELNKRAEAFI 180

Query: 121 ARVNMQRRVEALD 131
           ARVN QR++EA+D
Sbjct: 181 ARVNKQRKLEAVD 188

BLAST of MC07g0043 vs. NCBI nr
Match: XP_038875115.1 (uncharacterized protein LOC120067646 [Benincasa hispida])

HSP 1 Score: 118 bits (296), Expect = 1.44e-30
Identity = 74/131 (56.49%), Postives = 98/131 (74.81%), Query Frame = 0

Query: 2   VVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSV-NVMYEEYCAKRMEEISMSHDE 61
           VV PPSFFSP C FV+VN I++YI+GE+KL  A++SS+ N MY+EY   +  E++M+  E
Sbjct: 60  VVMPPSFFSPSCFFVIVNFIVIYIVGEQKLAGAESSSIMNKMYDEYYIGKTMEMNMNSCE 119

Query: 62  DTRQLIEKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFIAR 121
           + +QL+EKVVE+KEEEE+      +DG + SE   + E E D E ANEELNKRAEAFIAR
Sbjct: 120 NMKQLVEKVVEEKEEEEMGFVEGDNDGVDVSE---KLETEGDCELANEELNKRAEAFIAR 179

Query: 122 VNMQRRVEALD 131
           VN QR++EA+D
Sbjct: 180 VNKQRKLEAVD 187

BLAST of MC07g0043 vs. NCBI nr
Match: KAE8646757.1 (hypothetical protein Csa_004884 [Cucumis sativus])

HSP 1 Score: 109 bits (273), Expect = 4.99e-27
Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 2   VVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEIS-MSHDE 61
           V TPPSFFSP CLFV+VN I+VYI+GE+KLT AK++ +N MY+EY  +R  E+  ++  E
Sbjct: 60  VATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTMYDEYYIERTLEMKYLNPCE 119

Query: 62  DTRQLI-EKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFIA 121
           + ++L+ EK VE+KEEE +   +  D+G   SE    +E E D + ANEELNKRAEAFIA
Sbjct: 120 NMKELVVEKFVEEKEEEGI-SPIEDDNGIGFSE----KENEGDCKLANEELNKRAEAFIA 179

Query: 122 RVNMQRRVEALD 131
           RVN QR++EA+D
Sbjct: 180 RVNKQRKLEAVD 186

BLAST of MC07g0043 vs. NCBI nr
Match: CAB4264057.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 73.2 bits (178), Expect = 4.10e-13
Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 0

Query: 7   SFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRME---EISMSHDEDTR 66
            FF+PRCLF+VVN I+V++IGE +L+  ++S  N MY EY  +       ISM  ++   
Sbjct: 9   GFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYVERTRSLRAPISMFQEKKEE 68

Query: 67  QLI----------EKVVEKKEEEEVDHTVHCDD---------GTNDSEEEKQRE------ 126
           + +           K++E+KE +E     H DD         GT++ E+E+++E      
Sbjct: 69  RTVLAILSQKEDNAKILEEKEVDETKEDKHEDDQDEDFKECEGTDEEEKEEEKEKKEEEI 128

Query: 127 ----EEEDGEFAN---EELNKRAEAFIARVNMQRRVEA 129
               EEE+ E A    EELNKR EAFIARVN QR +EA
Sbjct: 129 EQEKEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 166

BLAST of MC07g0043 vs. NCBI nr
Match: CAB4294636.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 71.6 bits (174), Expect = 1.73e-12
Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 0

Query: 7   SFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRME---EISMSHDEDTR 66
            FF+PRCLF+VVN I+V++IGE +L+  ++S  N MY EY  +       ISM  ++   
Sbjct: 9   GFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYIERTRSLRAPISMFQEKKEE 68

Query: 67  QLI----------EKVVEKKEEEEVDHTVHCDD---------GTNDSE------------ 126
           + +           K++E+KE +E     H DD         GT++ E            
Sbjct: 69  RTVLAILSQKEDNAKILEEKEVDETKEDKHEDDQDEDFKECEGTDEEEKEEENEKKVEKK 128

Query: 127 -----EEKQREEEEDGEFANEELNKRAEAFIARVNMQRRVEA 129
                +EK+ EEEE      EELNKR EAFIARVN QR +EA
Sbjct: 129 EEEIEQEKEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 170

BLAST of MC07g0043 vs. ExPASy TrEMBL
Match: A0A5D3DN17 (DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002200 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 4.12e-32
Identity = 74/133 (55.64%), Postives = 103/133 (77.44%), Query Frame = 0

Query: 1   IVVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEIS--MSH 60
           IV+TPPSFFSP CLFV+VN I+VYI+GE+KLT AK++S+N+MY+EY  +R  E+   ++ 
Sbjct: 61  IVITPPSFFSPSCLFVIVNFIVVYIVGEQKLTSAKSASMNIMYDEYYIERTMEMKHYLNP 120

Query: 61  DEDTRQLIEKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFI 120
            E+ +QL+EK VE+KEEE +  ++  D+G +  +    +E E D +FANEELNKRAEAFI
Sbjct: 121 CENMKQLVEKTVEEKEEEGI-GSIDDDNGVDFID----KENEGDCKFANEELNKRAEAFI 180

Query: 121 ARVNMQRRVEALD 131
           ARVN QR++EA+D
Sbjct: 181 ARVNKQRKLEAVD 188

BLAST of MC07g0043 vs. ExPASy TrEMBL
Match: A0A0A0K9L0 (DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094140 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 1.83e-27
Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 2   VVTPPSFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEIS-MSHDE 61
           V TPPSFFSP CLFV+VN I+VYI+GE+KLT AK++ +N MY+EY  +R  E+  ++  E
Sbjct: 60  VATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTMYDEYYIERTLEMKYLNPCE 119

Query: 62  DTRQLI-EKVVEKKEEEEVDHTVHCDDGTNDSEEEKQREEEEDGEFANEELNKRAEAFIA 121
           + ++L+ EK VE+KEEE +   +  D+G   SE    +E E D + ANEELNKRAEAFIA
Sbjct: 120 NMKELVVEKFVEEKEEEGI-SPIEDDNGIGFSE----KENEGDCKLANEELNKRAEAFIA 179

Query: 122 RVNMQRRVEALD 131
           RVN QR++EA+D
Sbjct: 180 RVNKQRKLEAVD 186

BLAST of MC07g0043 vs. ExPASy TrEMBL
Match: A0A6J5TLF4 (DUF4408 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS5561 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.98e-13
Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 0

Query: 7   SFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRME---EISMSHDEDTR 66
            FF+PRCLF+VVN I+V++IGE +L+  ++S  N MY EY  +       ISM  ++   
Sbjct: 9   GFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYVERTRSLRAPISMFQEKKEE 68

Query: 67  QLI----------EKVVEKKEEEEVDHTVHCDD---------GTNDSEEEKQRE------ 126
           + +           K++E+KE +E     H DD         GT++ E+E+++E      
Sbjct: 69  RTVLAILSQKEDNAKILEEKEVDETKEDKHEDDQDEDFKECEGTDEEEKEEEKEKKEEEI 128

Query: 127 ----EEEDGEFAN---EELNKRAEAFIARVNMQRRVEA 129
               EEE+ E A    EELNKR EAFIARVN QR +EA
Sbjct: 129 EQEKEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 166

BLAST of MC07g0043 vs. ExPASy TrEMBL
Match: A0A6J5VZN2 (DUF4408 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS5566 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.39e-13
Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 0

Query: 7   SFFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRME---EISMSHDEDTR 66
            FF+PRCLF+VVN I+V++IGE +L+  ++S  N MY EY  +       ISM  ++   
Sbjct: 9   GFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYIERTRSLRAPISMFQEKKEE 68

Query: 67  QLI----------EKVVEKKEEEEVDHTVHCDD---------GTNDSE------------ 126
           + +           K++E+KE +E     H DD         GT++ E            
Sbjct: 69  RTVLAILSQKEDNAKILEEKEVDETKEDKHEDDQDEDFKECEGTDEEEKEEENEKKVEKK 128

Query: 127 -----EEKQREEEEDGEFANEELNKRAEAFIARVNMQRRVEA 129
                +EK+ EEEE      EELNKR EAFIARVN QR +EA
Sbjct: 129 EEEIEQEKEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 170

BLAST of MC07g0043 vs. ExPASy TrEMBL
Match: A0A7J7HKM5 (DUF4408 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_010735 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.22e-12
Identity = 51/127 (40.16%), Postives = 82/127 (64.57%), Query Frame = 0

Query: 8   FFSPRCLFVVVNVIIVYIIGERKLTDAKASSVNVMYEEYCAKRMEEISMSHDEDTRQLIE 67
           FF+P+CLFVV N IIV+++GE KL  +++S   +  E+   +R  E+++S +   +    
Sbjct: 58  FFTPKCLFVVGNAIIVFLVGESKLASSRSSPA-IHMEKKEEERKLEMNLSEESVNK---- 117

Query: 68  KVVEKKEEEEVDHTVHCDDG-----TNDSEEEKQREEEEDGEFANEELNKRAEAFIARVN 127
             +E++EEE+V +  + DDG      +D++EE++R+EEE+     EE NKR E FIA+VN
Sbjct: 118 --IEEREEEQVRNDEYGDDGLIGGDNHDNKEEEERDEEEELGLPTEEFNKRVEDFIAKVN 177

Query: 128 MQRRVEA 129
            QR +EA
Sbjct: 178 KQRLLEA 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0039829.18.50e-3255.64DUF4408 domain-containing protein [Cucumis melo var. makuwa] >TYK24670.1 DUF4408... [more]
XP_038875115.11.44e-3056.49uncharacterized protein LOC120067646 [Benincasa hispida][more]
KAE8646757.14.99e-2754.55hypothetical protein Csa_004884 [Cucumis sativus][more]
CAB4264057.14.10e-1338.61unnamed protein product [Prunus armeniaca][more]
CAB4294636.11.73e-1237.04unnamed protein product [Prunus armeniaca][more]
Match NameE-valueIdentityDescription
A0A5D3DN174.12e-3255.64DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0K9L01.83e-2754.55DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094140 PE=... [more]
A0A6J5TLF41.98e-1338.61DUF4408 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS55... [more]
A0A6J5VZN28.39e-1337.04DUF4408 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCU... [more]
A0A7J7HKM55.22e-1240.16DUF4408 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_010735 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..110
NoneNo IPR availablePANTHERPTHR35762TRANSMEMBRANE PROTEINcoord: 6..129
IPR025520Domain of unknown function DUF4408PFAMPF14364DUF4408coord: 8..31
e-value: 3.9E-7
score: 29.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0043.1MC07g0043.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane