MC07g0031 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0031
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 337102 .. 337239 (+)
RNA-Seq Expression	MC07g0031
Synteny	MC07g0031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTGCATTTTGGGGGACTCGGGTCTTGGAGATTGTGAAGAAGCACGACTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACAACCACCCGTAAAGCCAATGCCAAAAAAAGGCTTCTTCGTGTTTGGCAG

mRNA sequence

ATGGCGGGTGCATTTTGGGGGACTCGGGTCTTGGAGATTGTGAAGAAGCACGACTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACAACCACCCGTAAAGCCAATGCCAAAAAAAGGCTTCTTCGTGTTTGGCAG

Coding sequence (CDS)

ATGGCGGGTGCATTTTGGGGGACTCGGGTCTTGGAGATTGTGAAGAAGCACGACTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACAACCACCCGTAAAGCCAATGCCAAAAAAAGGCTTCTTCGTGTTTGGCAG

Protein sequence

MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ

Homology

[Close]

BLAST of MC07g0031 vs. NCBI nr
Match: XP_023515314.1 (uncharacterized protein LOC111779382 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 1.53e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. NCBI nr
Match: XP_022960352.1 (uncharacterized protein LOC111461104 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 1.53e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. NCBI nr
Match: XP_023004315.1 (uncharacterized protein LOC111497673 [Cucurbita maxima])

HSP 1 Score: 95.9 bits (237), Expect = 1.53e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. NCBI nr
Match: XP_038875024.1 (uncharacterized protein LOC120067546 [Benincasa hispida])

HSP 1 Score: 95.9 bits (237), Expect = 1.53e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. NCBI nr
Match: XP_004310116.1 (PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca])

HSP 1 Score: 95.9 bits (237), Expect = 1.61e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. ExPASy TrEMBL
Match: A0A6J1KU88 (uncharacterized protein LOC111497673 OS=Cucurbita maxima OX=3661 GN=LOC111497673 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.40e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. ExPASy TrEMBL
Match: A0A6J1H761 (uncharacterized protein LOC111461104 OS=Cucurbita moschata OX=3662 GN=LOC111461104 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.40e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. ExPASy TrEMBL
Match: A0A498IAH7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041086 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.25e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. ExPASy TrEMBL
Match: A0A498HQ02 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_025146 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.25e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. ExPASy TrEMBL
Match: A0A5N5FL79 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_009345 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.25e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46
          MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ
Sbjct: 1  MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 46

[Close]

BLAST of MC07g0031 vs. TAIR 10
Match: AT1G27435.1 (unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 4.6e-17
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 3  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 47
          GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQ
Sbjct: 6  GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQ 49

The following BLAST results are available for this feature:

BLAST of MC07g0031 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515314.1	1.53e-24	100.00	uncharacterized protein LOC111779382 [Cucurbita pepo subsp. pepo]	[more]
XP_022960352.1	1.53e-24	100.00	uncharacterized protein LOC111461104 [Cucurbita moschata]	[more]
XP_023004315.1	1.53e-24	100.00	uncharacterized protein LOC111497673 [Cucurbita maxima]	[more]
XP_038875024.1	1.53e-24	100.00	uncharacterized protein LOC120067546 [Benincasa hispida]	[more]
XP_004310116.1	1.61e-24	100.00	PREDICTED: uncharacterized protein LOC101295884 [Fragaria vesca subsp. vesca]	[more]

BLAST of MC07g0031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KU88	7.40e-25	100.00	uncharacterized protein LOC111497673 OS=Cucurbita maxima OX=3661 GN=LOC111497673...	[more]
A0A6J1H761	7.40e-25	100.00	uncharacterized protein LOC111461104 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A498IAH7	8.25e-25	100.00	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041086 PE=4 SV=1	[more]
A0A498HQ02	8.25e-25	100.00	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_025146 PE=4 SV=1	[more]
A0A5N5FL79	8.25e-25	100.00	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of MC07g0031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27435.1	4.6e-17	86.36	unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37703	RIBOSOMAL PROTEIN L31-RELATED	coord: 2..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0031.1	MC07g0031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane