MC07g0008 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0008
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic
LocationMC07: 130213 .. 130311 (-)
RNA-Seq ExpressionMC07g0008
SyntenyMC07g0008
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGAGTCTTATTTATGTAAGGAGATCGAAGATCGAATTAAGTCTCAAGAGGAGAATTGGTGTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGT

mRNA sequence

CTAGAGTCTTATTTATGTAAGGAGATCGAAGATCGAATTAAGTCTCAAGAGGAGAATTGGTGTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGT

Coding sequence (CDS)

CTAGAGTCTTATTTATGTAAGGAGATCGAAGATCGAATTAAGTCTCAAGAGGAGAATTGGTGTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGT

Protein sequence

LESYLCKEIEDRIKSQEENWCFTTNHKFHVGPS
Homology
[Close]
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match: Q4VZH1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-07
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 10  EDRIKSQEENWCFTTNHKFHVGPS 34
           EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 163 EDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match: B0Z4L3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhK PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-06
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 10  EDRIKSQEENWCFTTNHKFHVGPS 34
           EDRI+SQEEN CFTTNHKFHVGPS
Sbjct: 163 EDRIRSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match: B0Z4U7 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhK PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-06
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 10  EDRIKSQEENWCFTTNHKFHVGPS 34
           EDRI+SQEEN CFTTNHKFHVGPS
Sbjct: 163 EDRIRSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match: Q9MTP4 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhK PE=3 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-06
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 10  EDRIKSQEENWCFTTNHKFHVGPS 34
           EDRI+SQEEN CFTTNHKFHVGPS
Sbjct: 163 EDRIRSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match: B0Z531 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana OX=482428 GN=ndhK PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-06
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 10  EDRIKSQEENWCFTTNHKFHVGPS 34
           EDRI+SQEEN CFTTNHKFHVGPS
Sbjct: 163 EDRIRSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. NCBI nr
Match: YP_009439895.1 (NADH dehydrogenase subunit K [Gynostemma caulopterum] >YP_009468865.1 NADH dehydrogenase subunit K [Gynostemma compressum] >ATG86753.1 NADH dehydrogenase subunit K [Gynostemma caulopterum] >AVA29844.1 NADH dehydrogenase subunit K [Gynostemma compressum])

HSP 1 Score: 56.2 bits (134), Expect = 5.92e-08
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   L +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKLSREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. NCBI nr
Match: YP_009753878.1 (NADH dehydrogenase subunit K [Trichosanthes lobata] >QIT05826.1 NADH dehydrogenase subunit K [Trichosanthes lobata])

HSP 1 Score: 55.5 bits (132), Expect = 1.14e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. NCBI nr
Match: YP_009945421.1 (NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-plastoquinone oxidoreductase subunit K [Sechium edule])

HSP 1 Score: 55.5 bits (132), Expect = 1.14e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. NCBI nr
Match: QIT04137.1 (NADH dehydrogenase subunit K [Sechium edule])

HSP 1 Score: 55.5 bits (132), Expect = 1.14e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. NCBI nr
Match: YP_009430631.1 (NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >YP_010015143.1 NADH dehydrogenase subunit K [Gynostemma yixingense] >ART65086.1 NADH dehydrogenase subunit K [Gynostemma cardiospermum] >ATG86666.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >QOI14268.1 NADH dehydrogenase subunit K [Gynostemma yixingense])

HSP 1 Score: 55.5 bits (132), Expect = 1.14e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match: A0A2L0WR52 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gynostemma compressum OX=1348125 GN=ndhK PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.87e-08
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   L +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKLSREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match: A0A291IAN2 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gynostemma caulopterum OX=1592219 GN=ndhK PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.87e-08
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   L +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKLSREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match: A0A218KG48 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhK PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.54e-08
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match: A0A410HF89 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhK PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.54e-08
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

[Close]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match: A0A1X9Q1M2 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.54e-08
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   LESYLCKEI-EDRIKSQEENWCFTTNHKFHVGPS 33
           L   + +EI EDRIKSQEEN CFTTNHKFHVGPS
Sbjct: 153 LRKKISREIYEDRIKSQEENRCFTTNHKFHVGPS 186

The following BLAST results are available for this feature:
BLAST of MC07g0008 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZH15.2e-0795.83NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36... [more]
B0Z4L31.2e-0691.67NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola... [more]
B0Z4U71.2e-0691.67NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis OX=... [more]
Q9MTP41.2e-0691.67NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp... [more]
B0Z5311.2e-0691.67NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana... [more]
BLAST of MC07g0008 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009439895.15.92e-0879.41NADH dehydrogenase subunit K [Gynostemma caulopterum] >YP_009468865.1 NADH dehyd... [more]
YP_009753878.11.14e-0776.47NADH dehydrogenase subunit K [Trichosanthes lobata] >QIT05826.1 NADH dehydrogena... [more]
YP_009945421.11.14e-0776.47NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-pla... [more]
QIT04137.11.14e-0776.47NADH dehydrogenase subunit K [Sechium edule][more]
YP_009430631.11.14e-0776.47NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH deh... [more]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2L0WR522.87e-0879.41NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gynostemma compressum... [more]
A0A291IAN22.87e-0879.41NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Gynostemma caulopteru... [more]
A0A218KG485.54e-0876.47NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. ... [more]
A0A410HF895.54e-0876.47NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilow... [more]
A0A1X9Q1M25.54e-0876.47NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36... [more]
BLAST of MC07g0008 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0008.1MC07g0008.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0048038 quinone binding