MC06g_new0548 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g_new0548
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 26239201 .. 26239535 (-)
RNA-Seq ExpressionMC06g_new0548
SyntenyMC06g_new0548
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACGGTGGCCGAGTGTCAGGAATCTCCCTGAAGGATATTGATAGTGTCATTGCGGCTAATGAAATCAAAGGCTACATTGTAATGCCTGAGTGGTTTCGTAGTCTAGGTGTTTTGAAGAGTTATCAGGCACATAATTGGAGAAGACACCTGCAATCATTTTGGATGACTCTTTATCTTTGTTGCATCTTAGTTTAAAGAACTTCCATGGTCCATGGGCAAAGAAGACAGAGCAAAAGGTGGGCGACGACGAAGGTGCGACGACAATTACCTCGAATACCGTTTTGGAATCTACGGGGCTATTAATCTTAATTGCATTAAGATCAGCGTGA

mRNA sequence

ATGGCGGACGGTGGCCGAGTGTCAGGAATCTCCCTGAAGGATATTGATAGTGTCATTGCGGCTAATGAAATCAAAGGCTACATTGTAATGCCTGAGTGTTTAAAGAACTTCCATGGTCCATGGGCAAAGAAGACAGAGCAAAAGGTGGGCGACGACGAAGGTGCGACGACAATTACCTCGAATACCGTTTTGGAATCTACGGGGCTATTAATCTTAATTGCATTAAGATCAGCGTGA

Coding sequence (CDS)

ATGGCGGACGGTGGCCGAGTGTCAGGAATCTCCCTGAAGGATATTGATAGTGTCATTGCGGCTAATGAAATCAAAGGCTACATTGTAATGCCTGAGTGTTTAAAGAACTTCCATGGTCCATGGGCAAAGAAGACAGAGCAAAAGGTGGGCGACGACGAAGGTGCGACGACAATTACCTCGAATACCGTTTTGGAATCTACGGGGCTATTAATCTTAATTGCATTAAGATCAGCGTGA

Protein sequence

MADGGRVSGISLKDIDSVIAANEIKGYIVMPECLKNFHGPWAKKTEQKVGDDEGATTITSNTVLESTGLLILIALRSA
Homology
[Close]
BLAST of MC06g_new0548 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 55.1 bits (131), Expect = 2.14e-07
Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 1  MADGGRVSGISLKDIDSVIAANEIKGYIVM-------PECLKNFHGP-WAKKTEQKVGDD 60
          MAD   +S IS  D +S +  ++IK  IVM        + LK++H   W +  EQKVGDD
Sbjct: 1  MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 61 EGATTITSNTVLES 66
           GA TI SNTVL S
Sbjct: 61 GGAATIKSNTVLGS 74

[Close]
BLAST of MC06g_new0548 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.03e-07
Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 1  MADGGRVSGISLKDIDSVIAANEIKGYIVM-------PECLKNFHGP-WAKKTEQKVGDD 60
          MAD   +S IS  D +S +  ++IK  IVM        + LK++H   W +  EQKVGDD
Sbjct: 1  MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 61 EGATTITSNTVLES 66
           GA TI SNTVL S
Sbjct: 61 GGAATIKSNTVLGS 74

The following BLAST results are available for this feature:
BLAST of MC06g_new0548 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g_new0548 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.12.14e-0745.95uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of MC06g_new0548 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ21.03e-0745.95uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of MC06g_new0548 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g_new0548.1MC06g_new0548.1mRNA