MC06g_new0479 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g_new0479
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE4 SUMO-protein ligase PIAL2-like isoform X2
LocationMC06: 21600544 .. 21600923 (-)
RNA-Seq ExpressionMC06g_new0479
SyntenyMC06g_new0479
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCACCGTCGCCGTGTGAGTTGAACTTGAATAAAATTGCTGCACTTATAGAGGGCTTAGCTTTGAACGTCAAACATATCGGCCAATTCGACCCTGGCCAATTCTACAGTATCTGCATTTCCCTTGCCAGGTGTTGATTTATTTATTTGTAATTTAGGTTTCCAAGATTTTTTCTTGTTCTCTTCTTGTTGATATTTGATTTGCATGTTTTTTTTGTTTTTTTGTTTTTTTTACTGAATCCTGTGTGAATTTTGTAAGTAGGGAGGATTTGCTACTGGTAATATCTGCCGTTTGCTTAAGTGGTTGCAGTCAAATTCTGTATTTTCTGTACTTTCGCACTGAAAACTCAGTGGTTGCAAACTTGAACTGCGCGTGA

mRNA sequence

ATGGATGCACCGTCGCCGTGTGAGTTGAACTTGAATAAAATTGCTGCACTTATAGAGGGCTTAGCTTTGAACGTCAAACATATCGGCCAATTCGACCCTGGCCAATTCTACAGTATCTGCATTTCCCTTGCCAGGGAGGATTTGCTACTGGTAATATCTGCCGTTTGCTTAAGTGGTTGCAGTCAAATTCTGTATTTTCTGTACTTTCGCACTGAAAACTCAGTGGTTGCAAACTTGAACTGCGCGTGA

Coding sequence (CDS)

ATGGATGCACCGTCGCCGTGTGAGTTGAACTTGAATAAAATTGCTGCACTTATAGAGGGCTTAGCTTTGAACGTCAAACATATCGGCCAATTCGACCCTGGCCAATTCTACAGTATCTGCATTTCCCTTGCCAGGGAGGATTTGCTACTGGTAATATCTGCCGTTTGCTTAAGTGGTTGCAGTCAAATTCTGTATTTTCTGTACTTTCGCACTGAAAACTCAGTGGTTGCAAACTTGAACTGCGCGTGA

Protein sequence

MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLAREDLLLVISAVCLSGCSQILYFLYFRTENSVVANLNCA
Homology
[Close]
BLAST of MC06g_new0479 vs. NCBI nr
Match: XP_022146075.1 (E4 SUMO-protein ligase PIAL2-like isoform X2 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 2.47e-22
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLAR 
Sbjct: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARS 46

[Close]
BLAST of MC06g_new0479 vs. NCBI nr
Match: XP_022146074.1 (E4 SUMO-protein ligase PIAL2-like isoform X1 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 5.66e-22
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLAR 
Sbjct: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARS 46

[Close]
BLAST of MC06g_new0479 vs. NCBI nr
Match: XP_038907040.1 (E4 SUMO-protein ligase PIAL2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 51.2 bits (121), Expect = 1.16e-05
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          M A SP E+NLN+I + I+ L L+V  IGQ D  Q  SIC S+AR 
Sbjct: 1  MGASSPYEMNLNRILSYIDSLTLHVNRIGQMDQSQLCSICFSIARS 46

[Close]
BLAST of MC06g_new0479 vs. NCBI nr
Match: XP_038907038.1 (E4 SUMO-protein ligase PIAL2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 51.2 bits (121), Expect = 1.90e-05
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          M A SP E+NLN+I + I+ L L+V  IGQ D  Q  SIC S+AR 
Sbjct: 1  MGASSPYEMNLNRILSYIDSLTLHVNRIGQMDQSQLCSICFSIARS 46

[Close]
BLAST of MC06g_new0479 vs. ExPASy TrEMBL
Match: A0A6J1CW95 (E4 SUMO-protein ligase PIAL2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015363 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.19e-22
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLAR 
Sbjct: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARS 46

[Close]
BLAST of MC06g_new0479 vs. ExPASy TrEMBL
Match: A0A6J1CX37 (E4 SUMO-protein ligase PIAL2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015363 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.74e-22
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARE 46
          MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLAR 
Sbjct: 1  MDAPSPCELNLNKIAALIEGLALNVKHIGQFDPGQFYSICISLARS 46

The following BLAST results are available for this feature:
BLAST of MC06g_new0479 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g_new0479 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022146075.12.47e-2297.83E4 SUMO-protein ligase PIAL2-like isoform X2 [Momordica charantia][more]
XP_022146074.15.66e-2297.83E4 SUMO-protein ligase PIAL2-like isoform X1 [Momordica charantia][more]
XP_038907040.11.16e-0552.17E4 SUMO-protein ligase PIAL2-like isoform X2 [Benincasa hispida][more]
XP_038907038.11.90e-0552.17E4 SUMO-protein ligase PIAL2-like isoform X1 [Benincasa hispida][more]
BLAST of MC06g_new0479 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CW951.19e-2297.83E4 SUMO-protein ligase PIAL2-like isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1CX372.74e-2297.83E4 SUMO-protein ligase PIAL2-like isoform X1 OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of MC06g_new0479 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g_new0479.1MC06g_new0479.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity