MC06g_new0177 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g_new0177
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box domain-containing protein
Location	MC06: 8606011 .. 8608034 (-)
RNA-Seq Expression	MC06g_new0177
Synteny	MC06g_new0177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGAAGATGCAATGGAAGCCCTAACTGGGCAGCCACTAGTCAAATGGAAGCTGTCGATGCAAAATTCTGCCGAGGTCGATTGACGGCACTTAGAACGATTCTTGAGGTACCTACAAGGAGGTATCAGATATGCCACTCCGTCAAGTTAGTATTTATAAGTATCAAACAGATTTTTGATACTTGGGCCCATATGGATGATTGGTATATTTATAGCGAGTAGATGGACGTCCCATCAGTGTATTTCGCTGCTCGGACAGGGTTCTTCCGAGCGACCTTCGGTTCACCCATTCGCCTAAGTTGGATTTCGCTTGAGCCAAGTCGGCCGTGCGTGATTTTTGTTTCTGTTTTCTATTTTTCATTTCATTATTCTTTGTTTCTAATTTTTTTAAAATTACAAATAAAAATACATTTGGTAACCATTTTTTTTATTGTTTCTTAAAAAAAATAATTTGAACAAAAAATGATGTTTGATACCTATTTACTGTTATTAACTCAGATTGGCTTATTTTTATTTTTAGTTAAAATAAAATTTAATAGATATAATATAAAAATATATAGCATATATACGAAGAATATAATTCATTAAAGAAAATATAATTTATCCTAAATTATTATCTTTAAAATAATAAAAAAATCAAAATTCTTTTAATATAAAAAAGTATAAAATATATTTTTGTTTAAGAAAATATTAAAAAAATCTAAACTAGTAGCATAAATTTTCAAAATATGTTTAATTTAAAAAATACAAAATACTTTTTTAAGAAAATTAAGTTCCAAAAAAGATAGTGATGGTTTGTCATGAAATTCGCACGCAGGATCATCCAAAGCCTTAGACATTTAATCTTACCCAATATATATTATTTAATCTTAATCGCCCTACACATGAAGGAAAAAAAAAAACTTTTTTTTAGAGTTTCCAAACTCTAATAGATTGTATATAATAAAATATGGAAAAGAAAATTAGAAAAGACCGAATACAAATATTAAAAAGATATTATTTTAAATATAATAACCATTACTAAAACGAGATGGGAAATCCTAAAGTGAGGAGAAGATAGATGTAATGGAAAATCTAATCTATGTCCTGATTTCACTTATAAAATACAAGACTGATCAAGATTGATCATTTATTGATCATCGCCAGCCGTTTAAACTGAGGAATTCGAAGAGGAAAATCAAGATGATGAAGAACATGAATTCGAAGGAGCTACTCCCACTTTCACTTCCATCTGAACTGATTCAGCTAATATTCTCGAAACTCCCATTTGTAAATTTGCCCACTTGTCGACTCGTCCGTAAAGCATGGAACAATATGGTTTTAAGTTGCAAGTCCGATCCTTCAATCTTCTTTTTTCCCATATTTCTTCCTTTCTGAATCTTCATTGTGTGGACTTGGATCCTAAATATTTGGAAGGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTGATTTGTCCTTCACTAGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAAGATATAGATTATTATTACAGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGGAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGCCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAA

mRNA sequence

ATGAGGAGAAGATGCAATGGAAGCCCTAACTGGGCAGCCACTAGTCAAATGGAAGCTGTCGATGCAAAATTCTGCCGAGGTCGATTGACGGCACTTAGAACGATTCTTGAGATGGACGTCCCATCAGTGTATTTCGCTGCTCGGACAGGGTTCTTCCGAGCGACCTTCGGTTCACCCATTCGCCTAAGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTGATTTGTCCTTCACTAGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAAGATATAGATTATTATTACAGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGGAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGCCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAA

Coding sequence (CDS)

ATGAGGAGAAGATGCAATGGAAGCCCTAACTGGGCAGCCACTAGTCAAATGGAAGCTGTCGATGCAAAATTCTGCCGAGGTCGATTGACGGCACTTAGAACGATTCTTGAGATGGACGTCCCATCAGTGTATTTCGCTGCTCGGACAGGGTTCTTCCGAGCGACCTTCGGTTCACCCATTCGCCTAAGAATGAACAGTGTTGCAAGATTTAACTTCCATCCTGATTTTGATTTGTCCTTCACTAGTATCTCAATCATCAACTCCTGCAATGGACTCCTCTGTTGTTCTTTTGACTCCATAAGAAGATGTTGCGAAGCTTGCATATTAAATCCCATGACAAACGAGTACTTCAAACCTCCCACCTCCAGTTCCAATCATAAAGATATAGATTATTATTACAGATTAGGATTTAGTCTTAGAACAAAGCACTACAAATTGGCAAGACTCTCATTTGTACATGAGAGTAGCTTCGTGGAGATTTTTGCATTTGGTAGTACTACAAGTCCAAGTCCCGAATGGACCCCTATAGAATTTGTGTCTTTTTGCATTGATGACGATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTGGTTGCATATGATACAATTGTCGTCATTATTCGTTTGGATATTGAAGATGAGGAATTGGACCAAATTTCTTCTCCCCAACTTAGCCGAGATGTCATTGCCTTTGCCGTTGGAGTCTCTAATGACATCCTCTATCTAACTTTTTGCATAGACTTAGAATTTAAGTACCGTGTGGAAGATGGAAGAAGATTTTTCATGGGCTAA

Protein sequence

MRRRCNGSPNWAATSQMEAVDAKFCRGRLTALRTILEMDVPSVYFAARTGFFRATFGSPIRLRMNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCEACILNPMTNEYFKPPTSSSNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEFVSFCIDDDGVYFNGGLYWVVAYDTIVVIIRLDIEDEELDQISSPQLSRDVIAFAVGVSNDILYLTFCIDLEFKYRVEDGRRFFMG

Homology

[Close]

BLAST of MC06g_new0177 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 151 bits (382), Expect = 1.71e-39
Identity = 97/203 (47.78%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M++VA F FHP+       ISIINSC+GL+       RR        C+LNPMTNEYFK 
Sbjct: 87  MSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCVLNPMTNEYFKL 146

Query: 124 PTSSSNHKDI-DYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           PT  S    + DY+Y LGFS RTK YKLAR  +V     VEIFAFG+    S EWTP+  
Sbjct: 147 PTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEFIVEIFAFGT----SCEWTPVGS 206

Query: 184 VSFCIDD-DGVYFNGGLYWVVAYDT-----IVVIIRLDIEDEELDQISSPQLSRDVIAFA 243
           V + +++  GVYFNGGLYWV            VI RLD+ED++  QIS P    D   F 
Sbjct: 207 VPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDDKFKQISFPLDGDDEGDFP 266

Query: 244 -VGVSNDILYLTFCIDLEFKYRV 254
            +GV ND LYLT C   +F+Y V
Sbjct: 267 YIGVYNDTLYLTLCCG-DFEYHV 284

[Close]

BLAST of MC06g_new0177 vs. NCBI nr
Match: XP_022154078.1 (F-box/LRR-repeat protein At2g43260-like [Momordica charantia])

HSP 1 Score: 143 bits (361), Expect = 9.95e-38
Identity = 90/169 (53.25%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 65  NSVARFNFHPDFDLSFTSISIINSCNGLLCCSF---DSIRRCCEACILNPMTNEYFKPPT 124
           +SVA F+FH +F   F SISII+SCNGLLCC      + R   E  ILNPMTNEYFKPP 
Sbjct: 80  SSVASFSFHSNFP--FASISIIDSCNGLLCCYLVHERTARPPREPFILNPMTNEYFKPPF 139

Query: 125 SSSNHKDIDYY-YRLGFSLRTKHYKLARLSFVHE--SSFVEIFAFGSTTSPSPEWTPIEF 184
           S++   D+ YY +  GFSL+TK YKL RLSF  E  ++ VEIF  G++ S   +W P+ F
Sbjct: 140 SNA---DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS---KWNPVGF 199

Query: 185 V--SFCIDDDGVYFNGGLYWVV--AYDTIVVIIRLDIEDEELDQISSPQ 223
           +     + DDGVYFNGGLYWV    +    V+ RLDIEDEEL +IS PQ
Sbjct: 200 LPPDMTMXDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQ 240

[Close]

BLAST of MC06g_new0177 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 139 bits (351), Expect = 5.08e-35
Identity = 89/202 (44.06%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIR------RCCEACILNPMTNEYF 123
           M +VA+F FHPDF LS T ISI+N CNGLLCC F+            E CILNPMTNEYF
Sbjct: 88  MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKMPPYENVEVCILNPMTNEYF 147

Query: 124 KPPTSSSNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFV--EIFAFGSTTSPSPEWTP 183
           KPP S+++     Y YR GFS +TK YKL R  +  + + +  E F FG  T+    +  
Sbjct: 148 KPPISNASKDRWYYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG--TNCKSTYVS 207

Query: 184 IEFVSFCIDDDGVYFNGGLYWV---VAYDTIVVIIRLDIEDEELDQISSPQLSRDVIAFA 243
               S  +++  VYFNG LYW+   + + T V + RLDIE EEL +IS PQ        +
Sbjct: 208 CVPSSMSMEEHSVYFNGSLYWIGKQLKHPTNV-LYRLDIEKEELQEISFPQSGG---CCS 267

Query: 244 VGVSNDILYLTFCIDLEFKYRV 254
           +GV N  LYLT        Y V
Sbjct: 268 IGVFNGSLYLTLAQGRYHAYHV 283

[Close]

BLAST of MC06g_new0177 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 139 bits (351), Expect = 5.69e-35
Identity = 91/203 (44.83%), Postives = 116/203 (57.14%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M++VA F FHPD       I+IINSC+GL+    +  RR        C+LNP+TNEYFK 
Sbjct: 87  MSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPITNEYFKL 146

Query: 124 PTSSSNHKDI-DYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           PTS S    + +Y Y LGFS  T  YKLAR  F H+   V+IFAFG+    S EWTP+  
Sbjct: 147 PTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SCEWTPVGS 206

Query: 184 V-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEELDQISSPQLSRDVI 243
           V +F  +  GVY NGGLYWV +         D   VI RLD++DE+ ++IS P    D  
Sbjct: 207 VPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDGGD-- 266

Query: 244 AFAVGVSNDILYLTFCIDLEFKY 252
              + V N  LYLTFC + +F Y
Sbjct: 267 DPYIAVYNGTLYLTFCCE-DFDY 282

[Close]

BLAST of MC06g_new0177 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 5.94e-34
Identity = 92/206 (44.66%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+TNEYFK 
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFKH 145

Query: 124 PTSS-SNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           P       K  +Y Y LGFS +T  YKLAR  F H    V+IFAFG+    S EWTPI  
Sbjct: 146 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SCEWTPIGS 205

Query: 184 V-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEELDQISSPQLSRDV 243
           V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DE+  +IS P    + 
Sbjct: 206 VPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFGGDEP 265

Query: 244 IAFAVGVSNDILYLTFCIDLEFKYRV 254
               VGV N  LYLT C + +F Y V
Sbjct: 266 Y---VGVYNGTLYLTLCCE-DFDYHV 283

[Close]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL
Match: A0A6J1DJA3 (F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111021424 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 4.82e-38
Identity = 90/169 (53.25%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 65  NSVARFNFHPDFDLSFTSISIINSCNGLLCCSF---DSIRRCCEACILNPMTNEYFKPPT 124
           +SVA F+FH +F   F SISII+SCNGLLCC      + R   E  ILNPMTNEYFKPP 
Sbjct: 80  SSVASFSFHSNFP--FASISIIDSCNGLLCCYLVHERTARPPREPFILNPMTNEYFKPPF 139

Query: 125 SSSNHKDIDYY-YRLGFSLRTKHYKLARLSFVHE--SSFVEIFAFGSTTSPSPEWTPIEF 184
           S++   D+ YY +  GFSL+TK YKL RLSF  E  ++ VEIF  G++ S   +W P+ F
Sbjct: 140 SNA---DVWYYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRS---KWNPVGF 199

Query: 185 V--SFCIDDDGVYFNGGLYWVV--AYDTIVVIIRLDIEDEELDQISSPQ 223
           +     + DDGVYFNGGLYWV    +    V+ RLDIEDEEL +IS PQ
Sbjct: 200 LPPDMTMXDDGVYFNGGLYWVANQPFGRTNVMYRLDIEDEELLEISFPQ 240

[Close]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 2.46e-35
Identity = 89/202 (44.06%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIR------RCCEACILNPMTNEYF 123
           M +VA+F FHPDF LS T ISI+N CNGLLCC F+            E CILNPMTNEYF
Sbjct: 88  MCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKMPPYENVEVCILNPMTNEYF 147

Query: 124 KPPTSSSNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFV--EIFAFGSTTSPSPEWTP 183
           KPP S+++     Y YR GFS +TK YKL R  +  + + +  E F FG  T+    +  
Sbjct: 148 KPPISNASKDRWYYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFG--TNCKSTYVS 207

Query: 184 IEFVSFCIDDDGVYFNGGLYWV---VAYDTIVVIIRLDIEDEELDQISSPQLSRDVIAFA 243
               S  +++  VYFNG LYW+   + + T V + RLDIE EEL +IS PQ        +
Sbjct: 208 CVPSSMSMEEHSVYFNGSLYWIGKQLKHPTNV-LYRLDIEKEELQEISFPQSGG---CCS 267

Query: 244 VGVSNDILYLTFCIDLEFKYRV 254
           +GV N  LYLT        Y V
Sbjct: 268 IGVFNGSLYLTLAQGRYHAYHV 283

[Close]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 2.76e-35
Identity = 91/203 (44.83%), Postives = 116/203 (57.14%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M++VA F FHPD       I+IINSC+GL+    +  RR        C+LNP+TNEYFK 
Sbjct: 87  MSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPITNEYFKL 146

Query: 124 PTSSSNHKDI-DYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           PTS S    + +Y Y LGFS  T  YKLAR  F H+   V+IFAFG+    S EWTP+  
Sbjct: 147 PTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFIVDIFAFGT----SCEWTPVGS 206

Query: 184 V-SFCIDDDGVYFNGGLYWVVAY--------DTIVVIIRLDIEDEELDQISSPQLSRDVI 243
           V +F  +  GVY NGGLYWV +         D   VI RLD++DE+ ++IS P    D  
Sbjct: 207 VPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDGGD-- 266

Query: 244 AFAVGVSNDILYLTFCIDLEFKY 252
              + V N  LYLTFC + +F Y
Sbjct: 267 DPYIAVYNGTLYLTFCCE-DFDY 282

[Close]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 2.88e-34
Identity = 92/206 (44.66%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+TNEYFK 
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFKH 145

Query: 124 PTSS-SNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           P       K  +Y Y LGFS +T  YKLAR  F H    V+IFAFG+    S EWTPI  
Sbjct: 146 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SCEWTPIGS 205

Query: 184 V-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEELDQISSPQLSRDV 243
           V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DE+  +IS P    + 
Sbjct: 206 VPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFGGDEP 265

Query: 244 IAFAVGVSNDILYLTFCIDLEFKYRV 254
               VGV N  LYLT C + +F Y V
Sbjct: 266 Y---VGVYNGTLYLTLCCE-DFDYHV 283

[Close]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 2.88e-34
Identity = 92/206 (44.66%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 64  MNSVARFNFHPDFDLSFTSISIINSCNGLLCCSFDSIRRCCE----ACILNPMTNEYFKP 123
           M+ VA F FHPDF  + + I+IINSC+GL+       RR  +     C+LNP+TNEYFK 
Sbjct: 86  MSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPITNEYFKH 145

Query: 124 PTSS-SNHKDIDYYYRLGFSLRTKHYKLARLSFVHESSFVEIFAFGSTTSPSPEWTPIEF 183
           P       K  +Y Y LGFS +T  YKLAR  F H    V+IFAFG+    S EWTPI  
Sbjct: 146 PNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT----SCEWTPIGS 205

Query: 184 V-SFCIDDDGVYFNGGLYWVVAY---------DTIVVIIRLDIEDEELDQISSPQLSRDV 243
           V +F  +  GVYFNGGLYWV +          D   V+ RLD+ DE+  +IS P    + 
Sbjct: 206 VPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFGGDEP 265

Query: 244 IAFAVGVSNDILYLTFCIDLEFKYRV 254
               VGV N  LYLT C + +F Y V
Sbjct: 266 Y---VGVYNGTLYLTLCCE-DFDYHV 283

The following BLAST results are available for this feature:

BLAST of MC06g_new0177 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0177 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880514.1	1.71e-39	47.78	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_022154078.1	9.95e-38	53.25	F-box/LRR-repeat protein At2g43260-like [Momordica charantia]	[more]
XP_022143297.1	5.08e-35	44.06	F-box/kelch-repeat protein At3g06240-like [Momordica charantia]	[more]
XP_004135796.1	5.69e-35	44.83	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]
XP_008450717.1	5.94e-34	44.66	PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ...	[more]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJA3	4.82e-38	53.25	F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1CQE2	2.46e-35	44.06	F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0M1M5	2.76e-35	44.83	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]
A0A5D3CIX9	2.88e-34	44.66	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	2.88e-34	44.66	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]

BLAST of MC06g_new0177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 87..225 e-value: 7.5E-13 score: 46.3
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 48..251
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 48..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g_new0177.1	MC06g_new0177.1	mRNA