MC06g_new0155 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g_new0155
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 7578593 .. 7579052 (-)
RNA-Seq ExpressionMC06g_new0155
SyntenyMC06g_new0155
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAATTAAAGATACAGCCTTCTTTATGTAATGAAGCAGAAGATATCTCAATCGCCGGGCTTGGTTACACAGGCTTGTTACCCAAGTGGGGGCAACAACGTGGTTGAAGGTTGGGCTGATCCATTTGGGCCGTGCTTCTTGATGAAGAGTTCTTCTGGCCCGCCCATTTCAAGATTGGAGCTGGGCTTTGAATCTTGGGTGAAGGCTCATGGTGCTCTGCCCCTAGATCGGAGGAGACCGCACGAGGCTGGCTTCACAGAGCAGTGTTACCTCCAATCGTAGTCGGTGAAAGGATAACGGGCCGGATCTTCGTAAGCCCAATTGGGCCCAATGGGAATCTCTAAACTCGACAACTACTTTTTTTTTGCCTTCGTTTCAAACTACAAGTCATTTTGGTTAAGAAAAAAAAAAAAAAAAATAATCACACTTTCATCTTGGTTATGCAATGACGGTCTGGT

mRNA sequence

ATGAAGCAGAAGATATCTCAATCGCCGGGCTTGGTTACACAGGCTTGTTACCCAAGTGGGGGCAACAACGTGGTTGAAGGTTGGGCTGATCCATTTGGGCCGTGCTTCTTGATGAAGAGTTCTTCTGGCCCGCCCATTTCAAGATTGGAGCTGGGCTTTGAATCTTGGGTGAAGGCTCATGGTGCTCTGCCCCTAGATCGGAGGAGACCGCACGAGGCTGGCTTCACAGAGCAGTGTTACCTCCAATCGTAG

Coding sequence (CDS)

ATGAAGCAGAAGATATCTCAATCGCCGGGCTTGGTTACACAGGCTTGTTACCCAAGTGGGGGCAACAACGTGGTTGAAGGTTGGGCTGATCCATTTGGGCCGTGCTTCTTGATGAAGAGTTCTTCTGGCCCGCCCATTTCAAGATTGGAGCTGGGCTTTGAATCTTGGGTGAAGGCTCATGGTGCTCTGCCCCTAGATCGGAGGAGACCGCACGAGGCTGGCTTCACAGAGCAGTGTTACCTCCAATCGTAG

Protein sequence

MKQKISQSPGLVTQACYPSGGNNVVEGWADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDRRRPHEAGFTEQCYLQS
Homology
BLAST of MC06g_new0155 vs. NCBI nr
Match: KAB2605751.1 (hypothetical protein D8674_005468 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 64.3 bits (155), Expect = 5.25e-11
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 8  SPGLVTQACYPSGGNNVVEGW--ADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPL 67
          SP L+T+A  PSGGN ++  W      GP +L    SGPPI   ELG  +W KA  +  L
Sbjct: 5  SPSLLTKAYNPSGGNKMLGRWFSLSGLGPSWLY---SGPPIPSWELGCVAWAKAQASWFL 64

Query: 68 DRRRPHEAGFTEQ 78
          +RR P +AGFTEQ
Sbjct: 65 ERRAPRKAGFTEQ 74

BLAST of MC06g_new0155 vs. NCBI nr
Match: RXH92060.1 (hypothetical protein DVH24_021083 [Malus domestica])

HSP 1 Score: 57.4 bits (137), Expect = 4.23e-08
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 11 LVTQACYPSGGNNVVEGWADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDRRRP 70
          L+TQAC PSG   V+E W    G   L    S PP+   EL    W KAH +  L+RR P
Sbjct: 11 LLTQACNPSGDIKVLERWFGLSGSA-LSWLYSNPPVPSQELCRGVWAKAHASRLLERRAP 70

Query: 71 HEAGFTEQ 78
           +AGFTEQ
Sbjct: 71 RKAGFTEQ 77

BLAST of MC06g_new0155 vs. NCBI nr
Match: RXH72439.1 (hypothetical protein DVH24_012123 [Malus domestica])

HSP 1 Score: 54.3 bits (129), Expect = 1.15e-06
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 0

Query: 11  LVTQACYPSGGNNVVEGW---ADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDR 70
           L TQAC PSG   V+  W   + P GP +L    SGPPI   ELG  +W KA     L+ 
Sbjct: 40  LATQACNPSGDIKVLGRWFCLSRP-GPMWLF---SGPPIPSWELGRGAWAKAWAPWFLEW 99

Query: 71  RRPHEAGFTEQ 78
           R P +AGFTEQ
Sbjct: 100 RAPRKAGFTEQ 106

BLAST of MC06g_new0155 vs. NCBI nr
Match: KZM91608.1 (hypothetical protein DCAR_021027 [Daucus carota subsp. sativus])

HSP 1 Score: 46.6 bits (109), Expect = 9.42e-04
Identity = 26/59 (44.07%), Postives = 30/59 (50.85%), Query Frame = 0

Query: 10  GLVTQACYPSGGNNVVEGWADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDRR 68
           GLV QAC PSG + +V GW  P G    M   +  PI   E G   W KA  + PL RR
Sbjct: 102 GLVAQACNPSGSHKMVGGWIGPEGWA-SMGLYTDLPIPSREQGHGLWTKARSSFPLKRR 159

BLAST of MC06g_new0155 vs. ExPASy TrEMBL
Match: A0A5N5FVY5 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_005468 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.54e-11
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 8  SPGLVTQACYPSGGNNVVEGW--ADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPL 67
          SP L+T+A  PSGGN ++  W      GP +L    SGPPI   ELG  +W KA  +  L
Sbjct: 5  SPSLLTKAYNPSGGNKMLGRWFSLSGLGPSWLY---SGPPIPSWELGCVAWAKAQASWFL 64

Query: 68 DRRRPHEAGFTEQ 78
          +RR P +AGFTEQ
Sbjct: 65 ERRAPRKAGFTEQ 74

BLAST of MC06g_new0155 vs. ExPASy TrEMBL
Match: A0A498J998 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021083 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.05e-08
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 11 LVTQACYPSGGNNVVEGWADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDRRRP 70
          L+TQAC PSG   V+E W    G   L    S PP+   EL    W KAH +  L+RR P
Sbjct: 11 LLTQACNPSGDIKVLERWFGLSGSA-LSWLYSNPPVPSQELCRGVWAKAHASRLLERRAP 70

Query: 71 HEAGFTEQ 78
           +AGFTEQ
Sbjct: 71 RKAGFTEQ 77

BLAST of MC06g_new0155 vs. ExPASy TrEMBL
Match: A0A498HNB2 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012123 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.55e-07
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 0

Query: 11  LVTQACYPSGGNNVVEGW---ADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDR 70
           L TQAC PSG   V+  W   + P GP +L    SGPPI   ELG  +W KA     L+ 
Sbjct: 40  LATQACNPSGDIKVLGRWFCLSRP-GPMWLF---SGPPIPSWELGRGAWAKAWAPWFLEW 99

Query: 71  RRPHEAGFTEQ 78
           R P +AGFTEQ
Sbjct: 100 RAPRKAGFTEQ 106

BLAST of MC06g_new0155 vs. ExPASy TrEMBL
Match: A0A164WCU8 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021027 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.56e-04
Identity = 26/59 (44.07%), Postives = 30/59 (50.85%), Query Frame = 0

Query: 10  GLVTQACYPSGGNNVVEGWADPFGPCFLMKSSSGPPISRLELGFESWVKAHGALPLDRR 68
           GLV QAC PSG + +V GW  P G    M   +  PI   E G   W KA  + PL RR
Sbjct: 102 GLVAQACNPSGSHKMVGGWIGPEGWA-SMGLYTDLPIPSREQGHGLWTKARSSFPLKRR 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAB2605751.15.25e-1147.95hypothetical protein D8674_005468 [Pyrus ussuriensis x Pyrus communis][more]
RXH92060.14.23e-0847.06hypothetical protein DVH24_021083 [Malus domestica][more]
RXH72439.11.15e-0647.89hypothetical protein DVH24_012123 [Malus domestica][more]
KZM91608.19.42e-0444.07hypothetical protein DCAR_021027 [Daucus carota subsp. sativus][more]
Match NameE-valueIdentityDescription
A0A5N5FVY52.54e-1147.95Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A498J9982.05e-0847.06Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021083 PE=4 SV=1[more]
A0A498HNB25.55e-0747.89Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012123 PE=4 SV=1[more]
A0A164WCU84.56e-0444.07Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_021027 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g_new0155.1MC06g_new0155.1mRNA