MC06g_new0134 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g_new0134
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 5968651 .. 5970168 (+)
RNA-Seq Expression	MC06g_new0134
Synteny	MC06g_new0134

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGATTGCTGCAAGAAAACAGAGATTTCCGATCGGAAAAAATGGTGGGAGTGATCAGAGATTCATTTGGGAGTCGAAGCAAGGGAAGGCGATGAAAGCGGAGGAATGGAAGAAGTTCCCAGATCGAAGGGATTGGAATGGAAAATGGAAACCGATTCCTATTGCTGTGTGTTGGTATTTGTAATGCTGTGAAGAGAAACTGAGAAGGGAAGGGAATTTAATTTATTATTTGGAACCACGTTTTGAGAAATTGGGAAATTGGACAAGCTTCGGCTCAGAATTACGGTTCTGACCTGTCATTCACCCACCCCTCTTTACATGGTTCAACATTGGGGAACTCCACGTGTAACACCTTCCTTCTTCGCCACCTGTTAAATTCCACCTTATCACATTATTTTCTTTCCTTTCATTTATTGGGATAAAATTTACCTGCTTACCGGTATTAAAAATTAACAATTAAAATAGATGATATAATAAATAGTTGAAGCACCTAAGTTTTATCCATATAATATTCAATTTCAGCTCAACACGTGTTTGCTCCCACATTGAGTACTAACTGAGGCATCGGAGTGTAATCAATAGAGCACCATACTAGAGCTGGATTTCTATGAGCAGGTTTAGCTCGAGTTAGGAAACGAAGATGTACGTGGCACTCACGCGTATTTACGTGGCACCCGCATAAGAATCAACATGAACCCCTATAATTTAGTCATACCTCACCCGTCCTTTTTGTGTTGCTTGATTGTATCAGAGCTTGGAATTGAGTAAAAAAATAAATAAAAGAAAACATGTGAGTGATATGAGTTGGTAAAATACAATTTAAGGACAACTTCTAACGTACAACTACATCATAGGAATTAAGTTGAAACTAAGGATTATTTAAAATCATAGAAATCAAATTGAAATTAAACTTTTTATGAACTAAATTAAAATTTATAAAACCTTATAGATCAAATTAAAATAATACCCAAATCATAAGATCCATTTATAATTCAAACCAAAAGTTATTTAAATGGAAAGATAGGGTAAGTTTGAGTTTTCATAGACCAAATCATGCATTTAATATAGATTTTAATTATATTAATAATTAGATGTATTTCTAATTATTTCCAGCCCTAAAGCATTTGAAACATCTTTAAAAGTTTCAATTTTTCAGGTCTCCTTAACAAAAAAAAAAAAAAAAAAAGTTTTAATGTACTTCCTTAATATTTCAACAAAATCCAAAGGTCATACGTTTGGGTCAATTTTCCAAGGTTATGATATTTGACTCTCTTTTTCTTTAATTTCTGTCTTTTTTTAATATAACAATAGGCCAAGGAAGACAAAGCAACAAGTGGGCAACGACAGAGGTGCAATGGCAATCGATTCAAACACCATTTTGGAATATGGGGAGGCCATCAGTCTTAATTGTATTAAGATTTGTGACCAACATGATTTGGAGAATTTGCCTAATCATTCCTTACCTATCATGGTGGAGAATAAGGGCAATTATTTCCCTTCCAATTGTGAATAG

mRNA sequence

ATGGGAAGGATTGCTGCAAGAAAACAGAGATTTCCGATCGGAAAAAATGGTGGGAGTGATCAGAGATTCATTTGGGAGTCGAAGCAAGGGAAGGCGATGAAAGCGGAGGAATGGAAGAAGTTCCCAGATCGAAGGGATTGGAATGGAAAATGGAAACCGATTCCTATTGCTGTGTGTTGGCCAAGGAAGACAAAGCAACAAGTGGGCAACGACAGAGGTGCAATGGCAATCGATTCAAACACCATTTTGGAATATGGGGAGGCCATCAGTCTTAATTGTATTAAGATTTGTGACCAACATGATTTGGAGAATTTGCCTAATCATTCCTTACCTATCATGGTGGAGAATAAGGGCAATTATTTCCCTTCCAATTGTGAATAG

Coding sequence (CDS)

ATGGGAAGGATTGCTGCAAGAAAACAGAGATTTCCGATCGGAAAAAATGGTGGGAGTGATCAGAGATTCATTTGGGAGTCGAAGCAAGGGAAGGCGATGAAAGCGGAGGAATGGAAGAAGTTCCCAGATCGAAGGGATTGGAATGGAAAATGGAAACCGATTCCTATTGCTGTGTGTTGGCCAAGGAAGACAAAGCAACAAGTGGGCAACGACAGAGGTGCAATGGCAATCGATTCAAACACCATTTTGGAATATGGGGAGGCCATCAGTCTTAATTGTATTAAGATTTGTGACCAACATGATTTGGAGAATTTGCCTAATCATTCCTTACCTATCATGGTGGAGAATAAGGGCAATTATTTCCCTTCCAATTGTGAATAG

Protein sequence

MGRIAARKQRFPIGKNGGSDQRFIWESKQGKAMKAEEWKKFPDRRDWNGKWKPIPIAVCWPRKTKQQVGNDRGAMAIDSNTILEYGEAISLNCIKICDQHDLENLPNHSLPIMVENKGNYFPSNCE

Homology

[Close]

BLAST of MC06g_new0134 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 5.39e-10
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 60  WPRKTKQQVGNDRGAMAIDSNTILEYGEAISLNCIKICDQHDLENLPNHSLPIMVENK 117
           W R  +Q+VG+D GA  I SNT+L   E I+LNC++I  QHD  NL N SLP+ VE+K
Sbjct: 49  WTRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDK 106

[Close]

BLAST of MC06g_new0134 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.61e-10
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 60  WPRKTKQQVGNDRGAMAIDSNTILEYGEAISLNCIKICDQHDLENLPNHSLPIMVENK 117
           W R  +Q+VG+D GA  I SNT+L   E I+LNC++I  QHD  NL N SLP+ VE+K
Sbjct: 49  WTRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDK 106

The following BLAST results are available for this feature:

BLAST of MC06g_new0134 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g_new0134 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159860.1	5.39e-10	53.45	uncharacterized protein LOC111026150 [Momordica charantia]	[more]

BLAST of MC06g_new0134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZZ2	2.61e-10	53.45	uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of MC06g_new0134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g_new0134.1	MC06g_new0134.1	mRNA