MC06g_new0021 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGGATTTCAAAATTTTGGTCCCAATATAATATGAAATATGACAGTTGAAGAAGAGTAATAGAATTATTTGATCCCATAGGCCAAAAATCATAATGATGTTGAGCAGCTTCCCATGTGCCGCACATGGCTGCCAATTCCCTTCTCAAACACCAATCTTTAAACAAAATTGAAATAATTTTAGCAATCAAATCAAATTAATAAAATGGGAAAGTTGCATAAAAATCACATACTCTGACTCTGATTCTTCTTTCTCAAGTAATTCAGCAGAAGAATGTCGAGACCCACGACGGCGACGTTTTGTTTGTCGGCGATTTTGCTCTTGCTTTTTTCAGGTCTCTGTATCGTCATTTTCCGATGTGATTTGATGGGGCGATGGGTTCCCATTGTCGGCTTTTTGGTGCTCGCCGGAGCCGCACTGGTGGCCGCCAGAGCCACCGTCCTCGCCTGGATCACTGTGTTGGTGCTTTTAGTATTCGCCGGAAACCGGCGCCGGGTTCTCGTCAAACAGGGGAGAGAGATCACCGCCGACGTCGCCAGCTACTTGGCCGGCGTCGTTGTCAAAGAAAGAGGCCTCGCCGCCGTCGCCTTCGCCGCCCTCTGCAGCTTCGTCGCCGTCGTTCGCTCGACGGAGACCGATCAACTTCCTGTTTTCGGTTAATCTCATAAATCACTCCGAAGCTCATCGGAATTTTTTCCCCCACGAAATTGGCTGAAAAAATCTGTTTTTTTTTTTGGTTAAAAAGAAATGTCAATTACTTTGTTTGTGTAAAATTATTAACACGTTATTTATATTTAGGTTAAACTCTAAATTTAG ATGTCGAGACCCACGACGGCGACGTTTTGTTTGTCGGCGATTTTGCTCTTGCTTTTTTCAGGTCTCTGTATCGTCATTTTCCGATGTGATTTGATGGGGCGATGGGTTCCCATTGTCGGCTTTTTGGTGCTCGCCGGAGCCGCACTGGTGGCCGCCAGAGCCACCGTCCTCGCCTGGATCACTGTGTTGGTGCTTTTAGTATTCGCCGGAAACCGGCGCCGGGTTCTCGTCAAACAGGGGAGAGAGATCACCGCCGACGTCGCCAGCTACTTGGCCGGCGTCGTTGTCAAAGAAAGAGGCCTCGCCGCCGTCGCCTTCGCCGCCCTCTGCAGCTTCGTCGCCGTCGTTCGCTCGACGGAGACCGATCAACTTCCTGTTTTCGGTTAA ATGTCGAGACCCACGACGGCGACGTTTTGTTTGTCGGCGATTTTGCTCTTGCTTTTTTCAGGTCTCTGTATCGTCATTTTCCGATGTGATTTGATGGGGCGATGGGTTCCCATTGTCGGCTTTTTGGTGCTCGCCGGAGCCGCACTGGTGGCCGCCAGAGCCACCGTCCTCGCCTGGATCACTGTGTTGGTGCTTTTAGTATTCGCCGGAAACCGGCGCCGGGTTCTCGTCAAACAGGGGAGAGAGATCACCGCCGACGTCGCCAGCTACTTGGCCGGCGTCGTTGTCAAAGAAAGAGGCCTCGCCGCCGTCGCCTTCGCCGCCCTCTGCAGCTTCGTCGCCGTCGTTCGCTCGACGGAGACCGATCAACTTCCTGTTTTCGGTTAA MSRPTTATFCLSAILLLLFSGLCIVIFRCDLMGRWVPIVGFLVLAGAALVAARATVLAWITVLVLLVFAGNRRRVLVKQGREITADVASYLAGVVVKERGLAAVAFAALCSFVAVVRSTETDQLPVFG Homology
BLAST of MC06g_new0021 vs. NCBI nr
Match: XP_023004957.1 (uncharacterized protein LOC111498104 [Cucurbita maxima]) HSP 1 Score: 157 bits (396), Expect = 1.23e-46 Identity = 93/126 (73.81%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of MC06g_new0021 vs. NCBI nr
Match: XP_023530771.1 (uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156 bits (395), Expect = 1.75e-46 Identity = 93/126 (73.81%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of MC06g_new0021 vs. NCBI nr
Match: KAG7021425.1 (hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154 bits (390), Expect = 1.01e-45 Identity = 92/126 (73.02%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of MC06g_new0021 vs. NCBI nr
Match: XP_022933693.1 (uncharacterized protein LOC111441029 [Cucurbita moschata]) HSP 1 Score: 152 bits (385), Expect = 5.82e-45 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of MC06g_new0021 vs. NCBI nr
Match: KAA0057816.1 (hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa] >TYJ98500.1 hypothetical protein E5676_scaffold350G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (372), Expect = 6.87e-43 Identity = 92/129 (71.32%), Postives = 102/129 (79.07%), Query Frame = 0
BLAST of MC06g_new0021 vs. ExPASy TrEMBL
Match: A0A6J1KRU7 (uncharacterized protein LOC111498104 OS=Cucurbita maxima OX=3661 GN=LOC111498104 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 5.97e-47 Identity = 93/126 (73.81%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of MC06g_new0021 vs. ExPASy TrEMBL
Match: A0A6J1F5J3 (uncharacterized protein LOC111441029 OS=Cucurbita moschata OX=3662 GN=LOC111441029 PE=4 SV=1) HSP 1 Score: 152 bits (385), Expect = 2.82e-45 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of MC06g_new0021 vs. ExPASy TrEMBL
Match: A0A5D3BFC5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001030 PE=4 SV=1) HSP 1 Score: 147 bits (372), Expect = 3.32e-43 Identity = 92/129 (71.32%), Postives = 102/129 (79.07%), Query Frame = 0
BLAST of MC06g_new0021 vs. ExPASy TrEMBL
Match: A0A0A0LRZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003500 PE=4 SV=1) HSP 1 Score: 142 bits (357), Expect = 5.28e-41 Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 0
BLAST of MC06g_new0021 vs. ExPASy TrEMBL
Match: A0A0A0LNT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003480 PE=4 SV=1) HSP 1 Score: 138 bits (347), Expect = 1.50e-39 Identity = 83/118 (70.34%), Postives = 96/118 (81.36%), Query Frame = 0
BLAST of MC06g_new0021 vs. TAIR 10
Match: AT5G50175.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of MC06g_new0021 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of MC06g_new0021 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 6.0e-06 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of MC06g_new0021 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of MC06g_new0021 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.7e-05 Identity = 26/76 (34.21%), Postives = 45/76 (59.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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