MC06g2233 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g2233
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L36
LocationMC06: 29640476 .. 29642703 (+)
RNA-Seq ExpressionMC06g2233
SyntenyMC06g2233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGCAAATGCCAATGAGTCTGTCACTCATTTATCACTGGTTAAAGAAAATAACAAATTTATCATTATATCCTTTTAATTATATAAATTAAAAAGTTATTTTTATTCCTCTTTCAGCGTTTCCTTTTATTTGTTAAAAAACAAAAAACAAAAAACAAAAATAATTACATCTAAAAAATAATTAAAAGAGAAAACCCTAAATTCTACCCTCCCGACTCCTTCTCTTCCCCTCTTATTTCTCCGTATCTCAGCCGCTCTGTGTTTCTCTCTGCTGCAACGCGACGCGCCGGCACGCCTCTCCGTCGCAACTACGCCGGTACGCCTCCATCTCCCTTTTCTTTCTTCTCTTTCTATCTCATTCTCTGCACGCCGGCACACCACGCTTGTGCTCTCCTAGCACCCCTCCATCTCTCACTCTCTAGCACACAGATCAAAGGTTTTTTTTTTTTTTTTTCTGTCAATTCGACCAATCTCACGTTATGTAAAATTGGAATGAGGTCAACTTTAATTTAAAAATCCTAACACTGAAAATGATTTGAAGTCCTTGCAAATTCAGGCGGGAATAAGGGCGTAGATTTCTAGTTCTGATACCACTAGTTTCTTTAGCGCACGAATTGAAATTTTCTCTGTGTTTTGCGAAGTTTTTATATGACCAATCGTTCTGTTTCTGAGTCGTTCTCATTAATGCTATATGTGTAGTTAGCTGCTGTTTTGAGTATAATGTATGCTCTACATTGCATCTTGATCCTTTGTTTTCTAGTTGATCGCGTTATATGGAGGCGACATAATAATCTGCTGCAGGCAATTTTTGTTTATATTAAAATTTTTTTTGGGTGATTAGGACTATTATACACACGTTTTGGGTTTTCACCTTCTTCTCAAGAATCCTTCATTTTGTTTGGAACTCTTCAACAAATAATATTTACACGTTAAATGTGTCGTAAAGTTTGGATATTGCTGGAATTTGCATAGTTATTACTTGACTAGAACTCTTAAAAGGGAAAAGAAAAAGTTTAGTCACGTATGTGCTTTTCTGATTTTCATGATAATGACCTGAATTGTTCTACATTTTTCATGAACCTGATGATGTGCAGATTTAGTTACAAAAATCAAGTGGCAGGAATCACATTTTTGCTTTTTCTATTGCTTATATCAAAACCAACTCTTGTAGGGTCTTGCAGAATCGAGGTTTTGTAATTAAGCTTCAAATTTTTAGAGTGAACTGATTGGTTTTTGTGCAAACAGGTATGGCTCCAAAACAACCGAATACAGGCCTTTTTGTCGGGCTGAACAAGGGGCATATAGTCACCAAGAAAGAGTTGGCCCCACGCCCCTCTGATCGCAAAGGAGTAAGTTAACATATCCCTCAATGTATTAGAGTTCATGCAATAGTTGGAAGTGGAAGCCATTGGATTTTCTTTGTTTAAACATGTTTTTCTAGGGGATGCTATTTACCTTATTTTAAATTTCCTGTTAAGACCACATCATTCTGAAAAGGTTTTGTTATATTGTGCATCTATCATGACTAATTAATGTAGAAAACAAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATTCGGGAAGTGGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTCGGAAAAGACAAGCGTGCTCTTAAGGTAGCCAAAAGAAAGCTCGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAAGAGATGTCGAGCGTTCTAAGAAAGATGAGGTAATCTTTTAAGAACAATATTTAGGTGCTAACTGGTGAACATTTTTATGCCGACCATCATTTAAAAATTATCTAGTTTTGCATATTCCTCTCTTATTTGTAAAAAATTTAATGATGGTCAAAGCAAGATAGGTGCATTTCCCATCCTTTAAATGGTCTTCGGACGAAGTTATAATTAAGATTCTGATTCCTTTTCTGGATGCGTTTTAATTGCAGGGCCGGTGGAGGTGGTGAGAAGAAGAAGTGAGATCTACACTTCTCTCATTCTTCTCTCATTCATTCAAAGCTTTTACTTTCGGCTTCTCATTTTTTGTTGTTTTACTATCGAATTTGTTACAAGACCGAGCTCTATTTAGTTTGCGTGCTAGTAGATTAAATTCTGTTGTCTTTGGATTTGTTTTACTAATACCCAATTTTGTTACATCTCAAGTCATGGTTTTGAGTTGTTTGTACTTTTAGATATTCACTCAACTTGCAACATCATCTTCTCC

mRNA sequence

TTGGCAAATGCCAATGAGTCTGTCACTCATTTATCACTGGTTAAAGAAAATAACAAATTTATCATTATATCCTTTTAATTATATAAATTAAAAAGTTATTTTTATTCCTCTTTCAGCGTTTCCTTTTATTTGTTAAAAAACAAAAAACAAAAAACAAAAATAATTACATCTAAAAAATAATTAAAAGAGAAAACCCTAAATTCTACCCTCCCGACTCCTTCTCTTCCCCTCTTATTTCTCCGTATCTCAGCCGCTCTGTGTTTCTCTCTGCTGCAACGCGACGCGCCGGCACGCCTCTCCGTCGCAACTACGCCGGTATGGCTCCAAAACAACCGAATACAGGCCTTTTTGTCGGGCTGAACAAGGGGCATATAGTCACCAAGAAAGAGTTGGCCCCACGCCCCTCTGATCGCAAAGGAAAAACAAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATTCGGGAAGTGGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTCGGAAAAGACAAGCGTGCTCTTAAGGTAGCCAAAAGAAAGCTCGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAAGAGATGTCGAGCGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGGTGAGAAGAAGAAGTGAGATCTACACTTCTCTCATTCTTCTCTCATTCATTCAAAGCTTTTACTTTCGGCTTCTCATTTTTTGTTGTTTTACTATCGAATTTGTTACAAGACCGAGCTCTATTTAGTTTGCGTGCTAGTAGATTAAATTCTGTTGTCTTTGGATTTGTTTTACTAATACCCAATTTTGTTACATCTCAAGTCATGGTTTTGAGTTGTTTGTACTTTTAGATATTCACTCAACTTGCAACATCATCTTCTCC

Coding sequence (CDS)

ATGGCTCCAAAACAACCGAATACAGGCCTTTTTGTCGGGCTGAACAAGGGGCATATAGTCACCAAGAAAGAGTTGGCCCCACGCCCCTCTGATCGCAAAGGAAAAACAAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATTCGGGAAGTGGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTCGGAAAAGACAAGCGTGCTCTTAAGGTAGCCAAAAGAAAGCTCGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAAGAGATGTCGAGCGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGGTGAGAAGAAGAAGTGA

Protein sequence

MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Homology
[Close]
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-42
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-40
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E  PRP++RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G  EKKK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

[Close]
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.1e-40
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---GEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG    EKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 5.7e-34
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 92
          TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61 TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.2e-29
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 0 

Query: 12  VGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKR 71
           VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 72  ALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE 108
           ALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101

[Close]
BLAST of MC06g2233 vs. NCBI nr
Match: XP_022945858.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958050.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022995694.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023532485.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023532486.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023541175.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >KAG6605730.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035637.1 60S ribosomal protein L36-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (511), Expect = 1.04e-64
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (511), Expect = 1.08e-64
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]
BLAST of MC06g2233 vs. NCBI nr
Match: XP_022140912.1 (60S ribosomal protein L36-2-like [Momordica charantia])

HSP 1 Score: 201 bits (510), Expect = 1.48e-64
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPN+GLFVGLNKGH+VTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNSGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. NCBI nr
Match: XP_022155584.1 (60S ribosomal protein L36-2-like [Momordica charantia])

HSP 1 Score: 201 bits (510), Expect = 1.48e-64
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR GGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRXGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. NCBI nr
Match: XP_022923053.1 (60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923055.1 60S ribosomal protein L36-2-like isoform X2 [Cucurbita moschata] >XP_022923056.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022985002.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985003.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985004.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023552431.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (508), Expect = 2.99e-64
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 5.04e-65
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match: A0A6J1K6N3 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 5.04e-65
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match: A0A6J1CID5 (60S ribosomal protein L36 OS=Momordica charantia OX=3673 GN=LOC111011461 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 7.17e-65
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPN+GLFVGLNKGH+VTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNSGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match: A0A6J1DQP8 (60S ribosomal protein L36 OS=Momordica charantia OX=3673 GN=LOC111022683 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 7.17e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR GGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRXGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match: A0A6J1JC29 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111483099 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.45e-64
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]
BLAST of MC06g2233 vs. TAIR 10
Match: AT3G53740.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of MC06g2233 vs. TAIR 10
Match: AT3G53740.3 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of MC06g2233 vs. TAIR 10
Match: AT3G53740.4 (Ribosomal protein L36e family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGGG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]
BLAST of MC06g2233 vs. TAIR 10
Match: AT5G02450.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-41
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E  PRP++RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG--EKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G  EKKK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

[Close]
BLAST of MC06g2233 vs. TAIR 10
Match: AT2G37600.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-41
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---GEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG    EKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

The following BLAST results are available for this feature:
BLAST of MC06g2233 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3521.5e-4282.1460S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1[more]
Q9LZ571.8e-4083.8160S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1[more]
O809294.1e-4083.8160S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1[more]
P528665.7e-3483.5260S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2[more]
Q9LRB87.2e-2971.8860S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1[more]
BLAST of MC06g2233 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945858.11.04e-6499.0960S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S riboso... [more]
KAG7013242.11.08e-6499.0960S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
XP_022140912.11.48e-6498.1860S ribosomal protein L36-2-like [Momordica charantia][more]
XP_022155584.11.48e-6499.0960S ribosomal protein L36-2-like [Momordica charantia][more]
XP_022923053.12.99e-6498.1860S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1... [more]
BLAST of MC06g2233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H2C55.04e-6599.0960S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=... [more]
A0A6J1K6N35.04e-6599.0960S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1[more]
A0A6J1CID57.17e-6598.1860S ribosomal protein L36 OS=Momordica charantia OX=3673 GN=LOC111011461 PE=3 SV... [more]
A0A6J1DQP87.17e-6599.0960S ribosomal protein L36 OS=Momordica charantia OX=3673 GN=LOC111022683 PE=3 SV... [more]
A0A6J1JC291.45e-6498.1860S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111483099 PE=3 SV=1[more]
BLAST of MC06g2233 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53740.21.1e-4382.14Ribosomal protein L36e family protein [more]
AT3G53740.31.1e-4382.14Ribosomal protein L36e family protein [more]
AT3G53740.41.1e-4382.14Ribosomal protein L36e family protein [more]
AT5G02450.11.3e-4183.81Ribosomal protein L36e family protein [more]
AT2G37600.12.9e-4183.81Ribosomal protein L36e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.176060S ribosomal protein L36coord: 1..105
e-value: 1.1E-44
score: 153.0
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 8..101
e-value: 9.2E-43
score: 144.4
IPR000509Ribosomal protein L36ePANTHERPTHR1011460S RIBOSOMAL PROTEIN L36coord: 1..110
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 55..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR10114:SF1460S RIBOSOMAL PROTEIN L36-1-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g2233.1MC06g2233.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome