MC06g2182 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g2182
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 29213474 .. 29213823 (+)
RNA-Seq ExpressionMC06g2182
SyntenyMC06g2182
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTCTTCTTCTTCTGAGCTTCCCAATATCTCTAGTGCAGCTCCAGCCCTCTTCCTTCGCATTGGCTCCTGGCAGGCATGTAAATAATTTTAATTTTAATTTGTATCTCTCATTCTCTATGTATGTGGTATTATAAGCTAAGGCTTGTTTTTGGCTTCATTTTTCAGGCAGTGCCCCAAAATGAAGGTGATTTGGCGTTGAGATTTGATTATGGGGCCGAGAATATATCGTGGGAGATTGTAAATGAAGGGCCTTCGACAAAGCACAAGATTGAAATTGATTGGTCCAACATCATTGGGATTCAAGCTTCTACTGAAGATCACAGACAAGGAACCCTCCAACTTGAGGTT

mRNA sequence

GCCTCTTCTTCTTCTGAGCTTCCCAATATCTCTAGTGCAGCTCCAGCCCTCTTCCTTCGCATTGGCTCCTGGCAGGCATTGCCCCAAAATGAAGGTGATTTGGCGTTGAGATTTGATTATGGGGCCGAGAATATATCGTGGGAGATTGTAAATGAAGGGCCTTCGACAAAGCACAAGATTGAAATTGATTGGTCCAACATCATTGGGATTCAAGCTTCTACTGAAGATCACAGACAAGGAACCCTCCAACTTGAGGTT

Coding sequence (CDS)

GCCTCTTCTTCTTCTGAGCTTCCCAATATCTCTAGTGCAGCTCCAGCCCTCTTCCTTCGCATTGGCTCCTGGCAGGCATTGCCCCAAAATGAAGGTGATTTGGCGTTGAGATTTGATTATGGGGCCGAGAATATATCGTGGGAGATTGTAAATGAAGGGCCTTCGACAAAGCACAAGATTGAAATTGATTGGTCCAACATCATTGGGATTCAAGCTTCTACTGAAGATCACAGACAAGGAACCCTCCAACTTGAGGTT

Protein sequence

ASSSSELPNISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKIEIDWSNIIGIQASTEDHRQGTLQLEV
Homology
BLAST of MC06g2182 vs. NCBI nr
Match: XP_022158816.1 (uncharacterized protein LOC111025282 [Momordica charantia])

HSP 1 Score: 139 bits (350), Expect = 1.95e-38
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 2   SSSSELPNISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKIE 61
           SS SELP+IS+AAPALFLRIGSWQ +PQNEGDL LRFDY  + ISWEIV EGPS KHKIE
Sbjct: 125 SSPSELPHISNAAPALFLRIGSWQVVPQNEGDLVLRFDYRTKKISWEIVREGPS-KHKIE 184

Query: 62  IDWSNIIGIQASTEDHRQGTLQLEV 86
           IDWSNIIGI+A+TEDHRQG LQLE+
Sbjct: 185 IDWSNIIGIEAATEDHRQGILQLEL 208

BLAST of MC06g2182 vs. NCBI nr
Match: XP_016900954.1 (PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo])

HSP 1 Score: 117 bits (294), Expect = 1.04e-30
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 2   SSSSELPNIS-SAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SS +E PN   +AAPALFLRIGSWQ +  NE DL L+FDY  + ISWE+V EGPS KHKI
Sbjct: 59  SSFAEPPNTPFNAAPALFLRIGSWQVVANNESDLVLKFDYRNKKISWEVVREGPS-KHKI 118

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGIQA+ EDHRQG LQLE+
Sbjct: 119 EIDWSNIIGIQAAIEDHRQGILQLEL 143

BLAST of MC06g2182 vs. NCBI nr
Match: KAG7024019.1 (hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117 bits (294), Expect = 3.38e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 2   SSSSELPN-ISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SSSSELP  + +   ALFLR+GSWQ +P+N+GDL L+FDY  + ++WEIV EGPS KHKI
Sbjct: 110 SSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPS-KHKI 169

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGI+A+ EDHRQG LQLE+
Sbjct: 170 EIDWSNIIGIEAAIEDHRQGILQLEL 194

BLAST of MC06g2182 vs. NCBI nr
Match: XP_022961562.1 (uncharacterized protein LOC111462107 [Cucurbita moschata] >XP_023516882.1 uncharacterized protein LOC111780650 [Cucurbita pepo subsp. pepo] >KAG6590487.1 hypothetical protein SDJN03_15910, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (294), Expect = 4.38e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 2   SSSSELPN-ISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SSSSELP  + +   ALFLR+GSWQ +P+N+GDL L+FDY  + ++WEIV EGPS KHKI
Sbjct: 122 SSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPS-KHKI 181

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGI+A+ EDHRQG LQLE+
Sbjct: 182 EIDWSNIIGIEAAIEDHRQGILQLEL 206

BLAST of MC06g2182 vs. NCBI nr
Match: XP_022968779.1 (uncharacterized protein LOC111467912 [Cucurbita maxima])

HSP 1 Score: 117 bits (293), Expect = 6.17e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 2   SSSSELPN-ISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SSSSELP  + +   ALFLR+GSWQ +P+N+GDL L+FDY  + ++WEIV EGPS KHKI
Sbjct: 122 SSSSELPQLVFNGILALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPS-KHKI 181

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGI+A+ EDHRQG LQLE+
Sbjct: 182 EIDWSNIIGIEAAIEDHRQGILQLEL 206

BLAST of MC06g2182 vs. ExPASy TrEMBL
Match: A0A6J1E232 (uncharacterized protein LOC111025282 OS=Momordica charantia OX=3673 GN=LOC111025282 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 9.42e-39
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 2   SSSSELPNISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKIE 61
           SS SELP+IS+AAPALFLRIGSWQ +PQNEGDL LRFDY  + ISWEIV EGPS KHKIE
Sbjct: 125 SSPSELPHISNAAPALFLRIGSWQVVPQNEGDLVLRFDYRTKKISWEIVREGPS-KHKIE 184

Query: 62  IDWSNIIGIQASTEDHRQGTLQLEV 86
           IDWSNIIGI+A+TEDHRQG LQLE+
Sbjct: 185 IDWSNIIGIEAATEDHRQGILQLEL 208

BLAST of MC06g2182 vs. ExPASy TrEMBL
Match: A0A1S4DY92 (uncharacterized protein LOC107991120 OS=Cucumis melo OX=3656 GN=LOC107991120 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 5.05e-31
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 2   SSSSELPNIS-SAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SS +E PN   +AAPALFLRIGSWQ +  NE DL L+FDY  + ISWE+V EGPS KHKI
Sbjct: 59  SSFAEPPNTPFNAAPALFLRIGSWQVVANNESDLVLKFDYRNKKISWEVVREGPS-KHKI 118

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGIQA+ EDHRQG LQLE+
Sbjct: 119 EIDWSNIIGIQAAIEDHRQGILQLEL 143

BLAST of MC06g2182 vs. ExPASy TrEMBL
Match: A0A6J1HAI6 (uncharacterized protein LOC111462107 OS=Cucurbita moschata OX=3662 GN=LOC111462107 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 2.12e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 2   SSSSELPN-ISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SSSSELP  + +   ALFLR+GSWQ +P+N+GDL L+FDY  + ++WEIV EGPS KHKI
Sbjct: 122 SSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPS-KHKI 181

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGI+A+ EDHRQG LQLE+
Sbjct: 182 EIDWSNIIGIEAAIEDHRQGILQLEL 206

BLAST of MC06g2182 vs. ExPASy TrEMBL
Match: A0A6J1I0N3 (uncharacterized protein LOC111467912 OS=Cucurbita maxima OX=3661 GN=LOC111467912 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 2.99e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query: 2   SSSSELPN-ISSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SSSSELP  + +   ALFLR+GSWQ +P+N+GDL L+FDY  + ++WEIV EGPS KHKI
Sbjct: 122 SSSSELPQLVFNGILALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPS-KHKI 181

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EIDWSNIIGI+A+ EDHRQG LQLE+
Sbjct: 182 EIDWSNIIGIEAAIEDHRQGILQLEL 206

BLAST of MC06g2182 vs. ExPASy TrEMBL
Match: A0A0A0M1F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561960 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 6.44e-29
Identity = 58/86 (67.44%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 2   SSSSELPNIS-SAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKI 61
           SS +E PN   +AAPALFLRIGSWQ +  +E DL L+FDY  + +SWE+V EGPS KHKI
Sbjct: 59  SSFAEPPNTPFNAAPALFLRIGSWQVVANSESDLVLKFDYRNKKLSWEVVLEGPS-KHKI 118

Query: 62  EIDWSNIIGIQASTEDHRQGTLQLEV 86
           EI+WSNIIGIQA+ EDHRQG LQLE+
Sbjct: 119 EIEWSNIIGIQAAIEDHRQGILQLEL 143

BLAST of MC06g2182 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-09
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0

Query: 11  SSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKIEIDWSNIIGI 70
           +S  PA  LRIG W+   + EGDL  +  +    + WE++ +G   K KIEI WS+I+ +
Sbjct: 111 ASNFPATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQG--LKSKIEIQWSDIMAL 170

Query: 71  QASTEDHRQGTLQL 85
           +A+  +   GTL +
Sbjct: 171 KANLPEDEPGTLTI 182

BLAST of MC06g2182 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0

Query: 11  SSAAPALFLRIGSWQALPQNEGDLALRFDYGAENISWEIVNEGPSTKHKIEIDWSNIIGI 70
           +S  PA  L+IG W+   + EGDL  +  +    + WE++ +G   K KIEI WS+I+ +
Sbjct: 138 ASNFPASLLKIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQG--LKSKIEIQWSDIMAL 197

Query: 71  QASTEDHRQGTLQL 85
           +A+  +   GTL L
Sbjct: 198 KANCPEDGPGTLTL 209

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022158816.11.95e-3881.18uncharacterized protein LOC111025282 [Momordica charantia][more]
XP_016900954.11.04e-3070.93PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo][more]
KAG7024019.13.38e-3067.44hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022961562.14.38e-3067.44uncharacterized protein LOC111462107 [Cucurbita moschata] >XP_023516882.1 unchar... [more]
XP_022968779.16.17e-3067.44uncharacterized protein LOC111467912 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1E2329.42e-3981.18uncharacterized protein LOC111025282 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A1S4DY925.05e-3170.93uncharacterized protein LOC107991120 OS=Cucumis melo OX=3656 GN=LOC107991120 PE=... [more]
A0A6J1HAI62.12e-3067.44uncharacterized protein LOC111462107 OS=Cucurbita moschata OX=3662 GN=LOC1114621... [more]
A0A6J1I0N32.99e-3067.44uncharacterized protein LOC111467912 OS=Cucurbita maxima OX=3661 GN=LOC111467912... [more]
A0A0A0M1F96.44e-2967.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561960 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G24100.15.1e-0936.49unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G30780.11.5e-0836.49unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33494OS02G0793800 PROTEINcoord: 12..85
NoneNo IPR availablePANTHERPTHR33494:SF5F10A16.6 PROTEINcoord: 12..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g2182.1MC06g2182.1mRNA