MC06g2173 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g2173
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	PsbP domain-containing protein
Location	MC06: 29110510 .. 29113644 (-)
RNA-Seq Expression	MC06g2173
Synteny	MC06g2173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTGCAAGAATTATATTACATTTTGCTTCCATGATGAATAATATACCAGGATTCATATAATCAATTACATCATATACATCTCTAATGTCTGTGAATTCCCCAATCTACATCCATTCAACCCACATAATTCTTAAATGAATAAGAATAGTTCCATGGTCTCATAGTAGTTAAAAAAAAATTAAAAGGCTAAATCGAAGCATAGAGAATTATTAGAAGGTCAATCTTTACCGACCTTTAATTTAAATAAATCCGAGACGAAGAAATGAATCTTCTTATCCTCTCTCTTATCCTCTTTTATTCGATTTTCGAAGATGGCTGTAATCCTGGATTCGCTCTCTCCTCCAATTCACTCCCTGAGTTCTTCAATTCGGCGCAGGATTCCGACCACTCTCCCTTCTCCTTCTCCGCGGTGGCCCACCGATTCATTCCCTAAATCTCGCGCCTCACTCATTTCTCAATCTCAATCTCAAACGGTAATTCTTCTACTTCTCGTCAACAACTGCTCTCGTTAATTTCCAGAAATCGATTGGTTTTGTTATTGAATTGCCTTGCCTGAATCACTTGTTACTTGCCTCTCTCGCTACACCTTTCTTCTAATATGTAATCAGATTAAAGCTCTTGCAGTTCCCAGGAGGAGTGCAATGGCGTTGATCTTGTCCACTTGTATTTTCTCCAATACCAATACCAATACCGCATTGGCTGACCCGCCATCTCCTGGGTTGCTCGAATACATCGACACTTTCGATGGCTATTCGTTCAAGTACCCCAAGAACTGGATCCAGGTCCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCGTATGTTCTTGACGAGAATCTTTCGGTGGAGTTCTCCTCGCCGTCTTCCTCCAGGTACAAGAGCGTCGAGGACTTGGGGCCTCCTGAAGAAGCAGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCTACCAGGCTTGGGGTCAGAAGGGAATCCAACGTTCTTTCTACTTCTTCCAGAACGGCGGACGATGGCAAAACTTACTACCAAGTTGAGGTAATCAATGCACACACAAGTTTCCTGGTTTAATTCTTCTTCCACTTGCTTGGTTTTGGTCCATTTTGGTGAAGAACTCAAATTGTTTCATTTTTCTCTGCAACTCTGGATGGAACTGACCCCTAAGTTAGAAGTTAACATGTTGATTGGCTTTTTTTTTATCTCTACAATCTCTAATCTTGCAATTATGATGTGGGTATCAGGTAAACATAAAGTCATATGCAAACAGCAATGAACTGGCAGTAATGCCGCAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCGGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGCTGAGATTACAAACCCCAGAAAATGTGTTTGTAGAAGAGGAAAATGAGCTGCGTCAGGTTATGGATTCTTTCAGAGTCAACAGAGTGAATGCATGAAGTGAAGAAACACAAAAAGGATTGTGGCAACTGAGGCTTTTGTTTTCAGATGTAATAGCTGAAACATTGTACTTCGTATCACCAAATCAAATTGCTATTGAATTGTACAATTTGATATTGTCGAATCCCTGTCTCACTAATTTAACATTTCTTCATTCCTTGATAAGAAAAGGGAACCAAAGATCGACACTATCAATTTCACTGAAACAGGAATCACTTCTGAGCTACCAAAATGCATCATTTAGACAAACTTTACAACAGGGGAGGTTTTTCTGGTCTGCTACACTTCTTTCATCGTTCATCAGATCATGCTTCGGTTCACAAGTTTTAACAGAAAATTCATCACAATAGCTTATGACCGGACTTCGAACTTCCCTGCTCGTGTGAGAGCTCGAAAGCCTTTGTAAGGATGGTTTGGTAGGTTCTTCACATCAAGTTTATCTACTTGCAGGCCAGAGAGGACGATGCCCATAATCTTAAAACGCACTTGAAATGTTGGAAATACATGAAGCTGTTGTAACCCTGTCTCAAGTGTTAATGTTCCAGACATTGATGGGGTTTTATCTTTTGGCATCTTTCCAATTGTCCAAGAGCAGATCTGTAGAAACAAGTTCACAAGAAATTACAGAATTCCATCCTTTTTATCTTTTATCAGAAACGAAACTTTATTGATGATTAGTAGATTATGAAAGAACAAAAGGAAAAGAATAAAGTATCCCCAAAGAAACAACAATTCAGAAACCAAATCGACTCATTAAGACAAAGAGGGGGAGAGGGGGAGAGGGGGGATTTACTGTGTCACTTTCTCCAGAAGTACATAAACATCTTAAATCAGCTCAAAATCATAAATTTGGACACTTTTTTTTCTTTAAACATTTGGGATGGGGATTAAAAACTCTGATCTTACGGTTGATAATGTATGCTTTAATCGGCTATACTTAAGTCAACAATTTGGACTTTTTTTTAGCCCAATCAACCAAGAGAAGAAACCTGCTTATATCTTTTACTAGTTGATATAACTCCTTTTCTTCAATTTAACTAAATATAACATTTTTCTGAATACAAAGTGATGCAGCTGTTACCTTATTAGATAGGATGTTCACTGTTCCATAATTTGAAGTTAGGTCAGCAGATAAAACGCATGAGGGCAATTGAAACTGCACGTCTATTGAGTCGATTGGCTTTCCAGGATCATTTCGAGTTCCTACTAACACACTGATGCGACATGTTCCTGCATCTGAGGTAAACTGAGGCTTTACATATATAGGAGTATTCTTCAACTTTCTAACCCTGAATGGAAGTGAAATTGATTTGGTAAAGAGGGATGGAATCCTAATAATTGACATCTAAAGTACTGGAAAAGTAGATTTAGAAAGTATCTATATCCCCCATCTCAAGACAGAAGCACTTCAATTTAAGAAGTTAAAATATAGGAAAGACATTCTTTAAGTCAAATATACCTGTAACTCATGAGCTTAAACTGTCCATCAGGAGGCACGAATGACAGGATCTGATGGGACTCCCATGGGCGAAACCGAACACATGGGTGGAATCTCACATCATCAAGGATAGAAGGGTTTGTAAATGAAAGAGTCAAATCAGGGAGACCTGATAGATGAGAATTTACTTGGACCTCACCATAAATTTCACACTTGACCAAGTGGCC

mRNA sequence

TGCTGCAAGAATTATATTACATTTTGCTTCCATGATGAATAATATACCAGGATTCATATAATCAATTACATCATATACATCTCTAATGTCTGTGAATTCCCCAATCTACATCCATTCAACCCACATAATTCTTAAATGAATAAGAATAGTTCCATGGTCTCATAGTAGTTAAAAAAAAATTAAAAGGCTAAATCGAAGCATAGAGAATTATTAGAAGGTCAATCTTTACCGACCTTTAATTTAAATAAATCCGAGACGAAGAAATGAATCTTCTTATCCTCTCTCTTATCCTCTTTTATTCGATTTTCGAAGATGGCTGTAATCCTGGATTCGCTCTCTCCTCCAATTCACTCCCTGAGTTCTTCAATTCGGCGCAGGATTCCGACCACTCTCCCTTCTCCTTCTCCGCGGTGGCCCACCGATTCATTCCCTAAATCTCGCGCCTCACTCATTTCTCAATCTCAATCTCAAACGATTAAAGCTCTTGCAGTTCCCAGGAGGAGTGCAATGGCGTTGATCTTGTCCACTTGTATTTTCTCCAATACCAATACCAATACCGCATTGGCTGACCCGCCATCTCCTGGGTTGCTCGAATACATCGACACTTTCGATGGCTATTCGTTCAAGTACCCCAAGAACTGGATCCAGGTCCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCGTATGTTCTTGACGAGAATCTTTCGGTGGAGTTCTCCTCGCCGTCTTCCTCCAGGTACAAGAGCGTCGAGGACTTGGGGCCTCCTGAAGAAGCAGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCTACCAGGCTTGGGGTCAGAAGGGAATCCAACGTTCTTTCTACTTCTTCCAGAACGGCGGACGATGGCAAAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAGCAATGAACTGGCAGTAATGCCGCAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCGGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGCTGAGATTACAAACCCCAGAAAATGTGTTTGTAGAAGAGGAAAATGAGCTGCGTCAGGTTATGGATTCTTTCAGAGTCAACAGAGTGAATGCATGAAGTGAAGAAACACAAAAAGGATTGTGGCAACTGAGGCTTTTGTTTTCAGATGTAATAGCTGAAACATTGTACTTCGTATCACCAAATCAAATTGCTATTGAATTGTACAATTTGATATTGTCGAATCCCTGTCTCACTAATTTAACATTTCTTCATTCCTTGATAAGAAAAGGGAACCAAAGATCGACACTATCAATTTCACTGAAACAGGAATCACTTCTGAGCTACCAAAATGCATCATTTAGACAAACTTTACAACAGGGGAGGTTTTTCTGGTCTGCTACACTTCTTTCATCGTTCATCAGATCATGCTTCGGTTCACAAGTTTTAACAGAAAATTCATCACAATAGCTTATGACCGGACTTCGAACTTCCCTGCTCGTGTGAGAGCTCGAAAGCCTTTGTAAGGATGGTTTGGTAGGTTCTTCACATCAAGTTTATCTACTTGCAGGCCAGAGAGGACGATGCCCATAATCTTAAAACGCACTTGAAATGTTGGAAATACATGAAGCTGTTGTAACCCTGTCTCAAGTGTTAATGTTCCAGACATTGATGGGGTTTTATCTTTTGGCATCTTTCCAATTGTCCAAGAGCAGATCTGTAGAAACAAGTTCACAAGAAATTACAGAATTCCATCCTTTTTATCTTTTATCAGAAACGAAACTTTATTGATGATTAGTAGATTATGAAAGAACAAAAGGAAAAGAATAAAGTATCCCCAAAGAAACAACAATTCAGAAACCAAATCGACTCATTAAGACAAAGAGGGGGAGAGGGGGAGAGGGGGGATTTACTGTGTCACTTTCTCCAGAAGTACATAAACATCTTAAATCAGCTCAAAATCATAAATTTGGACACTTTTTTTTCTTTAAACATTTGGGATGGGGATTAAAAACTCTGATCTTACGGTTGATAATGTATGCTTTAATCGGCTATACTTAAGTCAACAATTTGGACTTTTTTTTAGCCCAATCAACCAAGAGAAGAAACCTGCTTATATCTTTTACTAGTTGATATAACTCCTTTTCTTCAATTTAACTAAATATAACATTTTTCTGAATACAAAGTGATGCAGCTGTTACCTTATTAGATAGGATGTTCACTGTTCCATAATTTGAAGTTAGGTCAGCAGATAAAACGCATGAGGGCAATTGAAACTGCACGTCTATTGAGTCGATTGGCTTTCCAGGATCATTTCGAGTTCCTACTAACACACTGATGCGACATGTTCCTGCATCTGAGGTAAACTGAGGCTTTACATATATAGGAGTATTCTTCAACTTTCTAACCCTGAATGGAAGTGAAATTGATTTGGTAAAGAGGGATGGAATCCTAATAATTGACATCTAAAGTACTGGAAAAGTAGATTTAGAAAGTATCTATATCCCCCATCTCAAGACAGAAGCACTTCAATTTAAGAAGTTAAAATATAGGAAAGACATTCTTTAAGTCAAATATACCTGTAACTCATGAGCTTAAACTGTCCATCAGGAGGCACGAATGACAGGATCTGATGGGACTCCCATGGGCGAAACCGAACACATGGGTGGAATCTCACATCATCAAGGATAGAAGGGTTTGTAAATGAAAGAGTCAAATCAGGGAGACCTGATAGATGAGAATTTACTTGGACCTCACCATAAATTTCACACTTGACCAAGTGGCC

Coding sequence (CDS)

ATGGCTGTAATCCTGGATTCGCTCTCTCCTCCAATTCACTCCCTGAGTTCTTCAATTCGGCGCAGGATTCCGACCACTCTCCCTTCTCCTTCTCCGCGGTGGCCCACCGATTCATTCCCTAAATCTCGCGCCTCACTCATTTCTCAATCTCAATCTCAAACGATTAAAGCTCTTGCAGTTCCCAGGAGGAGTGCAATGGCGTTGATCTTGTCCACTTGTATTTTCTCCAATACCAATACCAATACCGCATTGGCTGACCCGCCATCTCCTGGGTTGCTCGAATACATCGACACTTTCGATGGCTATTCGTTCAAGTACCCCAAGAACTGGATCCAGGTCCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCGTATGTTCTTGACGAGAATCTTTCGGTGGAGTTCTCCTCGCCGTCTTCCTCCAGGTACAAGAGCGTCGAGGACTTGGGGCCTCCTGAAGAAGCAGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCTACCAGGCTTGGGGTCAGAAGGGAATCCAACGTTCTTTCTACTTCTTCCAGAACGGCGGACGATGGCAAAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAGCAATGAACTGGCAGTAATGCCGCAGGATCGGGTGGTTCGTTTGGAATGGGACCGAAGATATCTTTCGGTTCTTGGAGTCGAAAACAGTCGGCTATACGAGCTGAGATTACAAACCCCAGAAAATGTGTTTGTAGAAGAGGAAAATGAGCTGCGTCAGGTTATGGATTCTTTCAGAGTCAACAGAGTGAATGCATGA

Protein sequence

MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAVPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFRVNRVNA

Homology

[Close]

BLAST of MC06g2173 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-84
Identity = 164/244 (67.21%), Postives = 192/244 (78.69%), Query Frame = 0


Query: 29  SPSPRWPTDSFPKSRASLISQSQSQTIKALAVPRRSA--MALILSTCIFSNTNTNTALAD 88
           S  P++ +    K  + +     +   +  AV RR +  M L++S  I S  N  TA A 
Sbjct: 46  SSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFAS 105

Query: 89  PPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEFSSPSSSRYKS 148
             +P   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S
Sbjct: 106 --TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTS 165

Query: 149 VEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLSTSSRTADDGKTYYQVEVNIKSYA 208
           +EDLG PEE GK+VL+QYLTEFMSTRLGV+R++N+LSTSSR ADDGK YYQVEVNIKSYA
Sbjct: 166 LEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYA 225

Query: 209 NSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFR 268
           N+NELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+VMDSFR
Sbjct: 226 NNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFR 285

Query: 269 VNRV 271
           V ++
Sbjct: 286 VEKI 287

[Close]

BLAST of MC06g2173 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.6e-05
Identity = 44/211 (20.85%), Postives = 87/211 (41.23%), Query Frame = 0


Query: 62  RRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIF 121
           RR A+  +  T + ++      LA+        ++D  DGYS+ YP +W +      D  
Sbjct: 59  RRQALVGV-GTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSA 118

Query: 122 FRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNV 181
           F+D Y+  +N+ V F     +    + ++GP EE    ++K         +     +   
Sbjct: 119 FKDRYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAAPNQVAT 178

Query: 182 LSTSSRTADDGKTYYQVEVNIKS--YANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 241
           +       +DGK YY  E  +++  YA ++                    + + V N+R 
Sbjct: 179 IYDMKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVAVGNNRY 238

Query: 242 YELRLQTPENVFVEEENELRQVMDSFRVNRV 271
           Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 239 YTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MC06g2173 vs. NCBI nr
Match: XP_022157032.1 (psbP domain-containing protein 1, chloroplastic [Momordica charantia])

HSP 1 Score: 533 bits (1373), Expect = 8.29e-191
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60
           MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV
Sbjct: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60

Query: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           ELRLQTPENVFVEEENELRQVMDSFRVNRVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272

[Close]

BLAST of MC06g2173 vs. NCBI nr
Match: XP_022968780.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 438 bits (1127), Expect = 1.91e-153
Identity = 234/273 (85.71%), Postives = 249/273 (91.21%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPT-DSFPKSRASLISQSQSQTIKALA 60
           MAVILDS  PPIH+LSSS R+ IPT   SPSPRWP  DS PKSR SL   S+S+ IKALA
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTA--SPSPRWPPIDSSPKSRFSLT--SESKPIKALA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGAD 120
           VPRRSAMALILS+CIFSN+    A+A+  S GLLEYIDTFDGYSF YPKNWIQVRGAGAD
Sbjct: 61  VPRRSAMALILSSCIFSNS----AMAEQ-SVGLLEYIDTFDGYSFNYPKNWIQVRGAGAD 120

Query: 121 IFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180
           IFFRDP+VLDEN+SVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES
Sbjct: 121 IFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180

Query: 181 NVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 240
           N+LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+RL
Sbjct: 181 NILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRL 240

Query: 241 YELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           YELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 YELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MC06g2173 vs. NCBI nr
Match: XP_022961486.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024032.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436 bits (1121), Expect = 1.56e-152
Identity = 234/273 (85.71%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPT-DSFPKSRASLISQSQSQTIKALA 60
           MAVILDS  PPIH+LSSS R+ IPT   S SPRWP  DS PK R SL   S+SQ IKALA
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTA--SSSPRWPPIDSSPKCRFSL--SSESQPIKALA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGAD 120
           VPRRSAMALILS+CIFSN+    ALA+  S GLLEYIDTFDGYSF YPKNWIQVRGAGAD
Sbjct: 61  VPRRSAMALILSSCIFSNS----ALAEQ-SVGLLEYIDTFDGYSFNYPKNWIQVRGAGAD 120

Query: 121 IFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180
           IFFRDP+VLDEN+SVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES
Sbjct: 121 IFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180

Query: 181 NVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 240
           N+LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+RL
Sbjct: 181 NILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRL 240

Query: 241 YELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           YELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 YELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MC06g2173 vs. NCBI nr
Match: XP_023515691.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435 bits (1119), Expect = 3.16e-152
Identity = 233/273 (85.35%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPT-DSFPKSRASLISQSQSQTIKALA 60
           MAVILDS  PPIH+L+SS R+ IPT   S SPRWP  DS PKSR SL   S+SQ IK LA
Sbjct: 1   MAVILDSFLPPIHTLTSSSRKWIPTA--SSSPRWPPIDSSPKSRFSL--SSESQPIKGLA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGAD 120
           VPRRSAMALILS+CIFSN+    ALA+  S GLLEYIDTFDGYSF YPKNWIQVRGAGAD
Sbjct: 61  VPRRSAMALILSSCIFSNS----ALAEQ-SVGLLEYIDTFDGYSFNYPKNWIQVRGAGAD 120

Query: 121 IFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180
           IFFRDP+VLDEN+SVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES
Sbjct: 121 IFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180

Query: 181 NVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 240
           N+LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+RL
Sbjct: 181 NILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRL 240

Query: 241 YELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           YELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 YELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MC06g2173 vs. NCBI nr
Match: XP_038894971.1 (psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_038894972.1 psbP domain-containing protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 432 bits (1111), Expect = 4.86e-151
Identity = 230/274 (83.94%), Postives = 247/274 (90.15%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIK-ALA 60
           MAVIL+S  PPIH+L SSIR+RIP T  SPSPRWP DS PK R      S+SQ+IK  +A
Sbjct: 1   MAVILNSFLPPIHTLISSIRQRIPCT--SPSPRWPMDSSPKCR------SESQSIKKGVA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADP-PSPGLLEYIDTFDGYSFKYPKNWIQVRGAGA 120
           VPRRSAMAL+LST IFSN+    ALA+P PS GLLEYIDTFDGYSFKYPKNWIQVRGAG+
Sbjct: 61  VPRRSAMALMLSTYIFSNS----ALAEPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGS 120

Query: 121 DIFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRE 180
           DIFFRDP+VLDENL VEFSSPSSSRY SV+DLGPPEEAGK+VLKQYLTEFMSTRLGVRRE
Sbjct: 121 DIFFRDPFVLDENLLVEFSSPSSSRYNSVQDLGPPEEAGKRVLKQYLTEFMSTRLGVRRE 180

Query: 181 SNVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSR 240
           SN+LSTSSR ADDGKTYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+R
Sbjct: 181 SNILSTSSRMADDGKTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNR 240

Query: 241 LYELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           LYELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 LYELRLQTPENVFVEEENELRQVMDSFRVNKVNA 262

[Close]

BLAST of MC06g2173 vs. ExPASy TrEMBL
Match: A0A6J1DTH5 (psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023855 PE=4 SV=1)

HSP 1 Score: 533 bits (1373), Expect = 4.02e-191
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60
           MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV
Sbjct: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60

Query: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           ELRLQTPENVFVEEENELRQVMDSFRVNRVNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272

[Close]

BLAST of MC06g2173 vs. ExPASy TrEMBL
Match: A0A6J1HY63 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467914 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 9.24e-154
Identity = 234/273 (85.71%), Postives = 249/273 (91.21%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPT-DSFPKSRASLISQSQSQTIKALA 60
           MAVILDS  PPIH+LSSS R+ IPT   SPSPRWP  DS PKSR SL   S+S+ IKALA
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTA--SPSPRWPPIDSSPKSRFSLT--SESKPIKALA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGAD 120
           VPRRSAMALILS+CIFSN+    A+A+  S GLLEYIDTFDGYSF YPKNWIQVRGAGAD
Sbjct: 61  VPRRSAMALILSSCIFSNS----AMAEQ-SVGLLEYIDTFDGYSFNYPKNWIQVRGAGAD 120

Query: 121 IFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180
           IFFRDP+VLDEN+SVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES
Sbjct: 121 IFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180

Query: 181 NVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 240
           N+LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+RL
Sbjct: 181 NILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRL 240

Query: 241 YELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           YELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 YELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MC06g2173 vs. ExPASy TrEMBL
Match: A0A6J1HAH2 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462051 PE=4 SV=1)

HSP 1 Score: 436 bits (1121), Expect = 7.58e-153
Identity = 234/273 (85.71%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPT-DSFPKSRASLISQSQSQTIKALA 60
           MAVILDS  PPIH+LSSS R+ IPT   S SPRWP  DS PK R SL   S+SQ IKALA
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTA--SSSPRWPPIDSSPKCRFSL--SSESQPIKALA 60

Query: 61  VPRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGAD 120
           VPRRSAMALILS+CIFSN+    ALA+  S GLLEYIDTFDGYSF YPKNWIQVRGAGAD
Sbjct: 61  VPRRSAMALILSSCIFSNS----ALAEQ-SVGLLEYIDTFDGYSFNYPKNWIQVRGAGAD 120

Query: 121 IFFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180
           IFFRDP+VLDEN+SVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES
Sbjct: 121 IFFRDPFVLDENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 180

Query: 181 NVLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 240
           N+LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVEN+RL
Sbjct: 181 NILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRL 240

Query: 241 YELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           YELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 YELRLQTPENVFVEEENELRQVMDSFRVNKVNA 264

[Close]

BLAST of MC06g2173 vs. ExPASy TrEMBL
Match: A0A5D3E4R5 (PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00220 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.52e-145
Identity = 225/272 (82.72%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60
           MAVIL S  P I +L+S IR+RIP+T    S R P  SFPK        SQSQ+IK +AV
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS---STRSPIISFPKCC------SQSQSIKDVAV 60

Query: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRR+AMALILSTCIFSN+    A A  PS GLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRNAMALILSTCIFSNS----AFA-VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDP+VLDENLSVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           +LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           ELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of MC06g2173 vs. ExPASy TrEMBL
Match: A0A1S3CLM8 (psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.52e-145
Identity = 225/272 (82.72%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60
           MAVIL S  P I +L+S IR+RIP+T    S R P  SFPK        SQSQ+IK +AV
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTS---STRSPIISFPKCC------SQSQSIKDVAV 60

Query: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRR+AMALILSTCIFSN+    A A  PS GLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRNAMALILSTCIFSNS----AFA-VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDP+VLDENLSVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           +LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVNA 272
           ELRLQTPENVFVEEENELRQVMDSFRVN+VNA
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNKVNA 258

[Close]

BLAST of MC06g2173 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 314.7 bits (805), Expect = 7.3e-86
Identity = 164/244 (67.21%), Postives = 192/244 (78.69%), Query Frame = 0


Query: 29  SPSPRWPTDSFPKSRASLISQSQSQTIKALAVPRRSA--MALILSTCIFSNTNTNTALAD 88
           S  P++ +    K  + +     +   +  AV RR +  M L++S  I S  N  TA A 
Sbjct: 46  SSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFAS 105

Query: 89  PPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEFSSPSSSRYKS 148
             +P   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S
Sbjct: 106 --TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTS 165

Query: 149 VEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLSTSSRTADDGKTYYQVEVNIKSYA 208
           +EDLG PEE GK+VL+QYLTEFMSTRLGV+R++N+LSTSSR ADDGK YYQVEVNIKSYA
Sbjct: 166 LEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYA 225

Query: 209 NSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENELRQVMDSFR 268
           N+NELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQTPE VF+EEE +LR+VMDSFR
Sbjct: 226 NNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFR 285

Query: 269 VNRV 271
           V ++
Sbjct: 286 VEKI 287

[Close]

BLAST of MC06g2173 vs. TAIR 10
Match: AT4G15510.3 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 314.7 bits (805), Expect = 7.3e-86
Identity = 157/205 (76.59%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 66  MALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDP 125
           M L++S  I S  N  TA A   +P   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP
Sbjct: 3   MGLLMSGLIVSQANLPTAFAS--TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDP 62

Query: 126 YVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLSTS 185
            VLDENLSVEFSSPSSS Y S+EDLG PEE GK+VL+QYLTEFMSTRLGV+R++N+LSTS
Sbjct: 63  VVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTS 122

Query: 186 SRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQ 245
           SR ADDGK YYQVEVNIKSYAN+NELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQ
Sbjct: 123 SRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQ 182

Query: 246 TPENVFVEEENELRQVMDSFRVNRV 271
           TPE VF+EEE +LR+VMDSFRV ++
Sbjct: 183 TPEKVFLEEEKDLRRVMDSFRVEKI 205

[Close]

BLAST of MC06g2173 vs. TAIR 10
Match: AT4G15510.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 203.4 bits (516), Expect = 2.4e-52
Identity = 110/181 (60.77%), Postives = 130/181 (71.82%), Query Frame = 0


Query: 29  SPSPRWPTDSFPKSRASLISQSQSQTIKALAVPRRSA--MALILSTCIFSNTNTNTALAD 88
           S  P++ +    K  + +     +   +  AV RR +  M L++S  I S  N  TA A 
Sbjct: 46  SSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFAS 105

Query: 89  PPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEFSSPSSSRYKS 148
             +P   EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S
Sbjct: 106 --TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTS 165

Query: 149 VEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLSTSSRTADDGKTYYQVEVNIKSYA 208
           +EDLG PEE GK+VL+QYLTEFMSTRLGV+R++N+LSTSSR ADDGK YYQVEV+     
Sbjct: 166 LEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVSQSQVP 224

[Close]

BLAST of MC06g2173 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06
Identity = 44/211 (20.85%), Postives = 87/211 (41.23%), Query Frame = 0


Query: 62  RRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIF 121
           RR A+  +  T + ++      LA+        ++D  DGYS+ YP +W +      D  
Sbjct: 59  RRQALVGV-GTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSA 118

Query: 122 FRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNV 181
           F+D Y+  +N+ V F     +    + ++GP EE    ++K         +     +   
Sbjct: 119 FKDRYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAAPNQVAT 178

Query: 182 LSTSSRTADDGKTYYQVEVNIKS--YANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRL 241
           +       +DGK YY  E  +++  YA ++                    + + V N+R 
Sbjct: 179 IYDMKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVAVGNNRY 238

Query: 242 YELRLQTPENVFVEEENELRQVMDSFRVNRV 271
           Y L +   E  + + + +L+ V DS ++ ++
Sbjct: 239 YTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MC06g2173 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 55/268 (20.52%), Postives = 104/268 (38.81%), Query Frame = 0


Query: 5   LDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAVPRRS 64
           + SLS      S +I  +     P+PS +            L+S    Q        RR 
Sbjct: 3   VSSLSIRCGGFSPTISHKTEILCPNPSLK---------ACCLLSSGAYQKGSGNNWKRRQ 62

Query: 65  AMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRD 124
           A+  +  T + ++      LA+        ++D  DGYS+ YP +W +      D  F+D
Sbjct: 63  ALVGV-GTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKD 122

Query: 125 PYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNVLST 184
            Y+  +N+ V F     +    + ++GP EE    ++K         +     +   +  
Sbjct: 123 RYLQLQNVRVRFIPTEKN---DIHEVGPMEEVVYDLVKH--------KFAAPNQVATIYD 182

Query: 185 SSRTADDGKTYYQVEVNIKS--YANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYEL 244
                +DGK YY  E  +++  YA ++                    + + V N+R Y L
Sbjct: 183 MKERVEDGKNYYTFEYGLRTPIYATTS-------------------FATVAVGNNRYYTL 230

Query: 245 RLQTPENVFVEEENELRQVMDSFRVNRV 271
            +   E  + + + +L+ V DS ++ ++
Sbjct: 243 IVGANERRWRKVKKQLQVVADSLKILQI 230

The following BLAST results are available for this feature:

BLAST of MC06g2173 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23403	1.0e-84	67.21	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
O80634	3.6e-05	20.85	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of MC06g2173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157032.1	8.29e-191	100.00	psbP domain-containing protein 1, chloroplastic [Momordica charantia]	[more]
XP_022968780.1	1.91e-153	85.71	psbP domain-containing protein 1, chloroplastic [Cucurbita maxima]	[more]
XP_022961486.1	1.56e-152	85.71	psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498...	[more]
XP_023515691.1	3.16e-152	85.35	psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038894971.1	4.86e-151	83.94	psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_03889497...	[more]

BLAST of MC06g2173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTH5	4.02e-191	100.00	psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HY63	9.24e-154	85.71	psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HAH2	7.58e-153	85.71	psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3E4R5	2.52e-145	82.72	PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CLM8	2.52e-145	82.72	psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]

BLAST of MC06g2173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15510.1	7.3e-86	67.21	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.3	7.3e-86	76.59	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.2	2.4e-52	60.77	Photosystem II reaction center PsbP family protein	[more]
AT2G39470.1	2.6e-06	20.85	PsbP-like protein 2	[more]
AT2G39470.2	2.8e-05	20.52	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 91..267 e-value: 1.8E-49 score: 167.9
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 88..267 e-value: 2.4E-52 score: 179.4
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 48..271
None	No IPR available	PANTHER	PTHR31407:SF15	PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 48..271
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 95..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g2173.1	MC06g2173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer
molecular_function	GO:0005509	calcium ion binding