MC06g1972 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1972
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	serine/arginine-rich splicing factor RS40-like
Location	MC06: 27235908 .. 27239255 (-)
RNA-Seq Expression	MC06g1972
Synteny	MC06g1972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAGTTGAACTCAAATAAATGACTAAAAAAGTTATCCCGTAAATTAAAATTAGGGTTAGAAAAAAAGAAAAACCCTAAAAGCAGCTATTTTTCCCCTAGCCGCAGCCCTCCCCCCGGTACGCAACTCTCTCTCTGCAGTTCCCTTCCCTCTCCGATACCGGCTACTGCGGCGGCACGACCAGGCGACGGCGATCCAGATCCTGCGGCGGCGCGATCATCCCTACCCGACGGCACTCGGCGAACACACCCGTTCGCGACCCGAAGCCCCCTGCGTCAGTCGACCTCCGACGAAGGGTGAGTGCGTAGTTGTTATGGATTTTTAAATTGTTTTTCACTCTTAGAATCAGTTTGGAATTACTGTCTTGCTGATGATGTGGTGAAATTAGGTTTCGTTAACTCTGGTGTTGCATTTGTATGATTTTCCTGTTATCCTTGTATCATGAGAGATGTATGCTAAATGTTTAATTTCTTTTTTCTAACTTCTATTCAGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCCGATCTGGAAAGACTTTTTGGTAGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTGAGCTTTTAGCATAGCATATCTGTTTGTCTCTTGATTCCTTAATTCATTTTAAAGTTGTATATAATTTGTATAATGTCGATACAATGCACTTGCAATTTGCGAAGTTGCTGATAATCTTTAATATATGCAATATACTGAATCTAAAAAAGTTACTCACAATCCACTGAGAAAGTGTTGGATACAACGTCTGCAAGGCAATTCCGCTGTTGGAAATTCCCCCCAAGTAGAGGCTGTTCTCGTTGCATTTGGTGCCCTACAATACGATTTTGCATCATCCAGCATATGGAGATCAAAGATGGAAACATTTGTTGAGTTTTTCGTCGGGGTTCTAAAACATTTTTGAGAAAAGAAGAGCGTATTTTTTAAATCCTAAACCGCCTTGGCCAGCATTTTCTTTGGTGCAGGATTTTCTTCGCATATCCATAATCATCTTCTTGGATAAGGATGGCTCTTCAGAATTGAGTTTTCCGCCTGTGACAAGCTTCCTCTTCTTGTTTCCAAGAAGATTCATACTGATCCTCAATGGCACTACCATCTTACATTTTCCTCAGACACTTTGCTTTCCATTCCTCATGACTTTTGCATGCCTACAATTTCAGACATTGTTTCATGCTTGAAACATTGTCGACCTCAACTGAGGCTGCAGAATAGATGGAGAAGGCACTCTCTATTTGTAGACCTACCATGTGACATCCTGTTTTGGATTATTGCTCATTGACACCACTTAGTTCATGGCACAAGGTCTGTTGCTAAATTCACTCGTAACTTAGTTTACAGATTTCACGGTGGTTGCGAAAATTTCTTTCTTATGGTAAGATGTTTTGTGGTTTGTTGAATATTCGTTAGAGAGAAAATTAATATTGCATTTCGAGGAATTATTTGGTGGGAAAATCCCCATCTTTATCATTTGTTGGTGTCCCACAGGTGCCATAATTAGTTTATTTAGAATTACTTGTTTGATTGGTTCTCAGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTAGACCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAGTAATATGCATACATACATATGGCACAACATCAAATGAATTCTTTTCCTTTGTGCTACTTTTATTTGATTTTATTTACTATACCTTAAACTCTTTCCGTCAATAATCCTTTTGCTCCATAGCAAGAGCGTGGCATTAGAAGACCAGGTGGTGGTGGTGGTGGAGTTGGAGGTGGAGGTGGTTCAAGGAGATCCTCTACTAATACAAGGCCTTCAAAGACTTTATTTATTATCAACTTTGATCCATATCATACTAGGACGAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTCGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGGTCAAATTTCCTTCGTTGATTTGCATTTTATTTTGGTACTGCAGTTATCATATTGAAGTTTGATTAATCCCCCTTTGCTTTCCACTTTTCTTTTCTCCTTTGCACTGAAACCATGTGAAGGAAATCACATTGATATTTTCACTTGTTATAGGCCACTGATTACATGTTTAGTCATTGTAATGCCATTTGATGATTGTTATTGTGTATAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCTGTTCGAGATGATGACGAGAAAAGAAATGGGTACAGTCCTGATAGGAATCGTGATAGATCTCCTGACAGAAAGCGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTACGGCAATGGTATTACCCGCAGTCCATACAGGAGACAAAGGGCCAGTCCTGATTATGGCAGTCGTCGTAGCCCAAGTCCTTATCAGAGAAACAGGGGCTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGACGGGAGAGAGAGAGATCAAGTGACCATGTTAGGCCCCCTAGCCATAGTCCCCATCCTCATCAGAGGGAAAGAGCAAACGATGACCGAGTCCACAACCGAAGTCGCAGTCCTTACGGGAGAGAAAGGGGGAGCCCTACTGATGGACGTGGCTCCAGCTATAGTCCTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCACGAGCAGCGGCTAAATACAGCCGCAGAACCTGGGGATAGCCCCAATTATGGTGGGACTCAGAGCCCAAAGCATCGGGGATATAACAGGTTTGTTGTTGGAGTTTGTTTTGTTATATTCTGATTCTTGTTCCATAATTTTGATTCTAGGCGCTCATGTTTTATGGTGCTGCAGCCCCCAAGCAGAGGAATGATGATCCACAAAATGAAGTGATGTTGCTCTCAATTTGCTCCAGACCATATCTAGATGTATAATCAGCATCTGCACTGCCGCTAAACATGTACTGTAAGGATAATGTTCTGTGATTTCTGTATGGTTCTATCTATTCTAAGGATATGGTGTTAGTTACTAGGGGTTTAAGTTAGCTATCAGAATACTTGGCACCTCTGATTATCCGTATTTGACAGACAGTCTTTATTAACGTTGCTTCTTTTTGCAGTTCTTAACAGTTAAAATGAAACATGTTTGTTGTGGAACTTGTTTTTTGTTTGTTGGGTATAAACATGTTAGATGATTGATTCGTAACAATTTCATTATGTGATTCTCAGATTTAGTTGGAT

mRNA sequence

AAATAGTTGAACTCAAATAAATGACTAAAAAAGTTATCCCGTAAATTAAAATTAGGGTTAGAAAAAAAGAAAAACCCTAAAAGCAGCTATTTTTCCCCTAGCCGCAGCCCTCCCCCCGGTACGCAACTCTCTCTCTGCAGTTCCCTTCCCTCTCCGATACCGGCTACTGCGGCGGCACGACCAGGCGACGGCGATCCAGATCCTGCGGCGGCGCGATCATCCCTACCCGACGGCACTCGGCGAACACACCCGTTCGCGACCCGAAGCCCCCTGCGTCAGTCGACCTCCGACGAAGGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCCGATCTGGAAAGACTTTTTGGTAGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTAGACCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCAGGTGGTGGTGGTGGTGGAGTTGGAGGTGGAGGTGGTTCAAGGAGATCCTCTACTAATACAAGGCCTTCAAAGACTTTATTTATTATCAACTTTGATCCATATCATACTAGGACGAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTCGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCTGTTCGAGATGATGACGAGAAAAGAAATGGGTACAGTCCTGATAGGAATCGTGATAGATCTCCTGACAGAAAGCGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTACGGCAATGGTATTACCCGCAGTCCATACAGGAGACAAAGGGCCAGTCCTGATTATGGCAGTCGTCGTAGCCCAAGTCCTTATCAGAGAAACAGGGGCTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGACGGGAGAGAGAGAGATCAAGTGACCATGTTAGGCCCCCTAGCCATAGTCCCCATCCTCATCAGAGGGAAAGAGCAAACGATGACCGAGTCCACAACCGAAGTCGCAGTCCTTACGGGAGAGAAAGGGGGAGCCCTACTGATGGACGTGGCTCCAGCTATAGTCCTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCACGAGCAGCGGCTAAATACAGCCGCAGAACCTGGGGATAGCCCCAATTATGGTGGGACTCAGAGCCCAAAGCATCGGGGATATAACAGCCCCCAAGCAGAGGAATGATGATCCACAAAATGAAGTGATGTTGCTCTCAATTTGCTCCAGACCATATCTAGATGTATAATCAGCATCTGCACTGCCGCTAAACATGTACTGTAAGGATAATGTTCTGTGATTTCTGTATGGTTCTATCTATTCTAAGGATATGGTGTTAGTTACTAGGGGTTTAAGTTAGCTATCAGAATACTTGGCACCTCTGATTATCCGTATTTGACAGACAGTCTTTATTAACGTTGCTTCTTTTTGCAGTTCTTAACAGTTAAAATGAAACATGTTTGTTGTGGAACTTGTTTTTTGTTTGTTGGGTATAAACATGTTAGATGATTGATTCGTAACAATTTCATTATGTGATTCTCAGATTTAGTTGGAT

Coding sequence (CDS)

ATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCCGATCTGGAAAGACTTTTTGGTAGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTAGACCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCAGGTGGTGGTGGTGGTGGAGTTGGAGGTGGAGGTGGTTCAAGGAGATCCTCTACTAATACAAGGCCTTCAAAGACTTTATTTATTATCAACTTTGATCCATATCATACTAGGACGAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTCGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCTGTTCGAGATGATGACGAGAAAAGAAATGGGTACAGTCCTGATAGGAATCGTGATAGATCTCCTGACAGAAAGCGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTACGGCAATGGTATTACCCGCAGTCCATACAGGAGACAAAGGGCCAGTCCTGATTATGGCAGTCGTCGTAGCCCAAGTCCTTATCAGAGAAACAGGGGCTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGACGGGAGAGAGAGAGATCAAGTGACCATGTTAGGCCCCCTAGCCATAGTCCCCATCCTCATCAGAGGGAAAGAGCAAACGATGACCGAGTCCACAACCGAAGTCGCAGTCCTTACGGGAGAGAAAGGGGGAGCCCTACTGATGGACGTGGCTCCAGCTATAGTCCTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCACGAGCAGCGGCTAAATACAGCCGCAGAACCTGGGGATAGCCCCAATTATGGTGGGACTCAGAGCCCAAAGCATCGGGGATATAACAGCCCCCAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE

Homology

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BLAST of MC06g1972 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 3.4e-107
Identity = 229/371 (61.73%), Postives = 277/371 (74.66%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTK ER        GG    GGGSRRSS++ RPSKTLF+INFD  +TRTR
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR 300
           PY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Sbjct: 241 PYKKSRRGSPEYGRDRRGNDSPRRRERVAS-----PTKYSRSPNNKRERMSP------NH 300

Query: 301 SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--K 360
           SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K
Sbjct: 301 SPFKKE--SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQK 350

Query: 361 HRGYNSPQAEE 365
            R   SP A+E
Sbjct: 361 SRSPRSPPADE 350

[Close]

BLAST of MC06g1972 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 375.2 bits (962), Expect = 8.6e-103
Identity = 225/379 (59.37%), Postives = 263/379 (69.39%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GR GRRLRVEWTK +R         GG G  GGSRRSS+  RPSKTLF+INFD  +TRTR
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP 300
           PY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Sbjct: 241 PYKRARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGE--------SRSPPP 300

Query: 301 YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNY 360
           Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y
Sbjct: 301 YEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGY 356

Query: 361 GGTQSP-KHRGYNSPQAEE 365
            G  SP +     SP AEE
Sbjct: 361 DGADSPIRESPSRSPPAEE 356

[Close]

BLAST of MC06g1972 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 5.6e-70
Identity = 159/288 (55.21%), Postives = 194/288 (67.36%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           G + RRL VEW K ERG  R            G  ++ +N +P+KTLF+INFDP  T+  
Sbjct: 61  GYEKRRLSVEWAKGERGRPR------------GDAKAPSNLKPTKTLFVINFDPIRTKEH 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           D+E+HF+PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE
Sbjct: 121 DIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240
           +      DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP  
Sbjct: 181 R-----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSPE- 240

Query: 241 YQRNRGSPDYGRGRSPNH----SPYRRERERSSDHVRPPSHSPHPHQR 285
           Y R +G   Y R RSP++    S Y R+R    D  R  S SP P  R
Sbjct: 241 YDRYKGPAAYERRRSPDYGRRSSDYGRQRSPGYDRYR--SRSPVPRGR 263

[Close]

BLAST of MC06g1972 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 148/306 (48.37%), Postives = 192/306 (62.75%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M+ ++ GNF+YD R  DLERLF ++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRT 120
           G   R+L VEW K  +G R +P  G           ++ +N RP+KTLF+INFDP  TR 
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----------KAVSNQRPTKTLFVINFDPIRTRE 120

Query: 121 RDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD 180
           RD+ERHF+PYGK+L+VR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  
Sbjct: 121 RDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAG 180

Query: 181 EKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPS 240
           E+ + Y        +  R+RRSPSP  R R SPDY           +R SP+Y   + P+
Sbjct: 181 EREDRY--------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPA 240

Query: 241 PYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP 300
           PY+R R SPDYGR              RSSD+ R  + SP             ++RSRSP
Sbjct: 241 PYER-RKSPDYGR--------------RSSDYGRARARSPG------------YDRSRSP 250

Query: 301 YGRERG 306
             R RG
Sbjct: 301 IQRARG 250

[Close]

BLAST of MC06g1972 vs. ExPASy Swiss-Prot
Match: Q08170 (Serine/arginine-rich splicing factor 4 OS=Homo sapiens OX=9606 GN=SRSF4 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 5.9e-11
Identity = 102/362 (28.18%), Postives = 170/362 (46.96%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M  ++ G   Y AR+ D+ER F  YGK+  VD+K+G+ F+  +D RDA+DA+  L+ ++ 
Sbjct: 1   MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNT--RPSKTLFIINFDPYHTR 120
              G R+ VE     RG RR G  G G   G G RRS  +    P++T + +  +   +R
Sbjct: 61  --CGERVIVE---HARGPRRDGSYGSG-RSGYGYRRSGRDKYGPPTRTEYRLIVENLSSR 120

Query: 121 T--RDLERHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEY 180
              +DL+ +    G++    + + R+N   +++    D  RALE  + +++  R I +  
Sbjct: 121 CSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL-V 180

Query: 181 AVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRR---ERGSPDYGNGITRSPYRRQRASP 240
             +    +R  YS  R+  RS  R R S     R    + S       +RS  R +  S 
Sbjct: 181 EDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 240

Query: 241 DYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYR---------RERERSSDHV-RPPSHSPH 300
                RS S  +++R SP   + RS +HS  +          E+ +++D+V +P S SP 
Sbjct: 241 SRSQSRSRSKKEKSR-SPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 300

Query: 301 PHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEP 343
            H+ +  +  R  ++ R     +RGS + GR    S  + R RS    G   R  + ++ 
Sbjct: 301 RHKSK--SKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKS 352

[Close]

BLAST of MC06g1972 vs. NCBI nr
Match: XP_022159582.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia])

HSP 1 Score: 676 bits (1745), Expect = 1.92e-244
Identity = 352/366 (96.17%), Postives = 355/366 (96.99%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRPGGGGGG    GGSRRSSTNTRPSKTLF+INFDPYHTRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGG----GGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY 300
           YQRNR SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSP PHQRERANDDRVHNRSRSPY
Sbjct: 241 YQRNRDSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSPY 300

Query: 301 GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS- 360
           GRERGSPTDGRG+SYSPPRD ERSNPDNGHEQRLNT AEPGDSP+YGGTQSP HRGYNS 
Sbjct: 301 GRERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNSR 360

Query: 361 -PQAEE 364
            PQAEE
Sbjct: 361 SPQAEE 362

[Close]

BLAST of MC06g1972 vs. NCBI nr
Match: XP_038904888.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 642 bits (1656), Expect = 8.41e-231
Identity = 342/369 (92.68%), Postives = 350/369 (94.85%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRPGG GGG GGGGGSRRSSTNTRPSKTLF+INFDPYHTRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDD 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS 300
           YQR R  GSPDYGRGRSPNHSPYRRERERSSD VR PSHSP PHQRER NDDRVHNRS S
Sbjct: 241 YQRERERGSPDYGRGRSPNHSPYRRERERSSDRVRAPSHSP-PHQRERPNDDRVHNRSPS 300

Query: 301 PYGRERGSPTDGRGSSYSPPRDRERS-NPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGY 360
           PYGRERGSPTDGRG+SYSP RDRERS NPDNGH+Q+ NT  EPG+SP+YGGTQSPKHRGY
Sbjct: 301 PYGRERGSPTDGRGTSYSP-RDRERSSNPDNGHDQQQNTVVEPGESPSYGGTQSPKHRGY 360

Query: 361 NS--PQAEE 364
            S  PQAEE
Sbjct: 361 GSRSPQAEE 367

[Close]

BLAST of MC06g1972 vs. NCBI nr
Match: XP_022159586.1 (serine/arginine-rich splicing factor RS40-like [Momordica charantia])

HSP 1 Score: 637 bits (1643), Expect = 2.18e-229
Identity = 330/332 (99.40%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 33  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG 92
           M  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG
Sbjct: 1   MAQGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG 60

Query: 93  GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA 152
           GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA
Sbjct: 61  GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA 120

Query: 153 TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP 212
           TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP
Sbjct: 121 TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP 180

Query: 213 DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV 272
           DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV
Sbjct: 181 DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV 240

Query: 273 RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ 332
           RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
Sbjct: 241 RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ 300

Query: 333 RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE 364
           RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
Sbjct: 301 RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE 332

[Close]

BLAST of MC06g1972 vs. NCBI nr
Match: XP_008449100.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo] >XP_016900609.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo] >KAA0065815.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo var. makuwa] >TYJ96553.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 613 bits (1580), Expect = 4.77e-219
Identity = 339/380 (89.21%), Postives = 348/380 (91.58%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRRSSTNTRPSKTLFIINFDPYH 120
           GRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRRSSTNTRPSKTLF+INFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH 300
           SPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRP-THQRERPNDDRVP 300

Query: 301 NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNY 360
           NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNY
Sbjct: 301 NRSPSPYGREREKGSPTDGRGTSYSP-RDRERSSNPDNGHDHGHDQQQNMVPEPGESPNY 360

Query: 361 GGTQSPKHRGYNS--PQAEE 364
           G TQSPKHRGY+S  PQAEE
Sbjct: 361 GDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of MC06g1972 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 608 bits (1568), Expect = 2.06e-217
Identity = 327/370 (88.38%), Postives = 338/370 (91.35%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRP GGGGG GGG  SRRSSTNTRPSKTLF+INFDPYHTR R
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGG--SRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS 300
           YQR R  GSPDY RGRSP HSPYRRERERSSDH+R PSHSP PHQRER NDDR+ NRS S
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSP-PHQRERPNDDRIPNRSPS 300

Query: 301 PYGRER--GSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRG 360
           PY RER  GSP  GRG SYSP RDRER NPDNGH+ + NT AEPG+ P+Y GTQSPKHRG
Sbjct: 301 PYRRERERGSPIGGRGRSYSP-RDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRG 360

Query: 361 YNS--PQAEE 364
           YNS  PQAEE
Sbjct: 361 YNSRSPQAEE 366

[Close]

BLAST of MC06g1972 vs. ExPASy TrEMBL
Match: A0A6J1E078 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025956 PE=4 SV=1)

HSP 1 Score: 676 bits (1745), Expect = 9.28e-245
Identity = 352/366 (96.17%), Postives = 355/366 (96.99%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRPGGGGGG    GGSRRSSTNTRPSKTLF+INFDPYHTRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGG----GGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY 300
           YQRNR SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSP PHQRERANDDRVHNRSRSPY
Sbjct: 241 YQRNRDSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSPY 300

Query: 301 GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS- 360
           GRERGSPTDGRG+SYSPPRD ERSNPDNGHEQRLNT AEPGDSP+YGGTQSP HRGYNS 
Sbjct: 301 GRERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNSR 360

Query: 361 -PQAEE 364
            PQAEE
Sbjct: 361 SPQAEE 362

[Close]

BLAST of MC06g1972 vs. ExPASy TrEMBL
Match: A0A6J1E4D4 (serine/arginine-rich splicing factor RS40-like OS=Momordica charantia OX=3673 GN=LOC111025957 PE=4 SV=1)

HSP 1 Score: 637 bits (1643), Expect = 1.06e-229
Identity = 330/332 (99.40%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 33  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG 92
           M  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG
Sbjct: 1   MAQGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGG 60

Query: 93  GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA 152
           GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA
Sbjct: 61  GSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDA 120

Query: 153 TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP 212
           TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP
Sbjct: 121 TRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSP 180

Query: 213 DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV 272
           DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV
Sbjct: 181 DYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHV 240

Query: 273 RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ 332
           RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
Sbjct: 241 RPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ 300

Query: 333 RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE 364
           RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
Sbjct: 301 RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE 332

[Close]

BLAST of MC06g1972 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 613 bits (1580), Expect = 2.31e-219
Identity = 339/380 (89.21%), Postives = 348/380 (91.58%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRRSSTNTRPSKTLFIINFDPYH 120
           GRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRRSSTNTRPSKTLF+INFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH 300
           SPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRP-THQRERPNDDRVP 300

Query: 301 NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNY 360
           NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNY
Sbjct: 301 NRSPSPYGREREKGSPTDGRGTSYSP-RDRERSSNPDNGHDHGHDQQQNMVPEPGESPNY 360

Query: 361 GGTQSPKHRGYNS--PQAEE 364
           G TQSPKHRGY+S  PQAEE
Sbjct: 361 GDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of MC06g1972 vs. ExPASy TrEMBL
Match: A0A5A7VJB8 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002140 PE=4 SV=1)

HSP 1 Score: 613 bits (1580), Expect = 2.31e-219
Identity = 339/380 (89.21%), Postives = 348/380 (91.58%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRRSSTNTRPSKTLFIINFDPYH 120
           GRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRRSSTNTRPSKTLF+INFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH 300
           SPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRP-THQRERPNDDRVP 300

Query: 301 NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNY 360
           NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNY
Sbjct: 301 NRSPSPYGREREKGSPTDGRGTSYSP-RDRERSSNPDNGHDHGHDQQQNMVPEPGESPNY 360

Query: 361 GGTQSPKHRGYNS--PQAEE 364
           G TQSPKHRGY+S  PQAEE
Sbjct: 361 GDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of MC06g1972 vs. ExPASy TrEMBL
Match: A0A0A0L2A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 1.44e-217
Identity = 337/379 (88.92%), Postives = 345/379 (91.03%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPG----GGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYH 120
           GRKGRRLRVEWTKQERGIRRPG    GGGGG GGGGGSRRSSTNTRPSKTLF+INFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRS SPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSSSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHN 300
           SPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR PSH P  HQRER NDDRV N
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRTPSHRPS-HQRERPNDDRVPN 300

Query: 301 RSRSPYGR--ERGSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYG 360
           RS SPYGR  E+GSP DGRG+SYSP RDRERS NPDNGH+    Q+  T  EPG+SPNYG
Sbjct: 301 RSPSPYGRGREKGSP-DGRGTSYSP-RDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYG 360

Query: 361 GTQSPKHRGYNS--PQAEE 364
           GTQSPK RGY S  PQAEE
Sbjct: 361 GTQSPKRRGYGSRSPQAEE 376

[Close]

BLAST of MC06g1972 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-108
Identity = 229/371 (61.73%), Postives = 277/371 (74.66%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTK ER        GG    GGGSRRSS++ RPSKTLF+INFD  +TRTR
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR 300
           PY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Sbjct: 241 PYKKSRRGSPEYGRDRRGNDSPRRRERVAS-----PTKYSRSPNNKRERMSP------NH 300

Query: 301 SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--K 360
           SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K
Sbjct: 301 SPFKKE--SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQK 350

Query: 361 HRGYNSPQAEE 365
            R   SP A+E
Sbjct: 361 SRSPRSPPADE 350

[Close]

BLAST of MC06g1972 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-108
Identity = 229/371 (61.73%), Postives = 277/371 (74.66%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GRKGRRLRVEWTK ER        GG    GGGSRRSS++ RPSKTLF+INFD  +TRTR
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR 300
           PY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Sbjct: 241 PYKKSRRGSPEYGRDRRGNDSPRRRERVAS-----PTKYSRSPNNKRERMSP------NH 300

Query: 301 SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--K 360
           SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K
Sbjct: 301 SPFKKE--SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQK 350

Query: 361 HRGYNSPQAEE 365
            R   SP A+E
Sbjct: 361 SRSPRSPPADE 350

[Close]

BLAST of MC06g1972 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 375.2 bits (962), Expect = 6.1e-104
Identity = 225/379 (59.37%), Postives = 263/379 (69.39%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GR GRRLRVEWTK +R         GG G  GGSRRSS+  RPSKTLF+INFD  +TRTR
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP 300
           PY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Sbjct: 241 PYKRARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGE--------SRSPPP 300

Query: 301 YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNY 360
           Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y
Sbjct: 301 YEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGY 356

Query: 361 GGTQSP-KHRGYNSPQAEE 365
            G  SP +     SP AEE
Sbjct: 361 DGADSPIRESPSRSPPAEE 356

[Close]

BLAST of MC06g1972 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-103
Identity = 225/380 (59.21%), Postives = 263/380 (69.21%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTR 120
           GR GRRLRVEWTK +R         GG G  GGSRRSS+  RPSKTLF+INFD  +TRTR
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP 300
           PY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Sbjct: 241 PYKRARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGE--------SRSPPP 300

Query: 301 YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNY 360
           Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y
Sbjct: 301 YEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGY 357

Query: 361 GGTQSP--KHRGYNSPQAEE 365
            G  SP  +     SP AEE
Sbjct: 361 DGADSPIRESSPSRSPPAEE 357

[Close]

BLAST of MC06g1972 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-89
Identity = 201/336 (59.82%), Postives = 244/336 (72.62%), Query Frame = 0


Query: 36  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSR 95
           GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSR
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSER--------GGDKRSGGGSR 62

Query: 96  RSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRA 155
           RSS++ RPSKTLF+INFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRA
Sbjct: 63  RSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRA 122

Query: 156 LELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG 215
           L+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG
Sbjct: 123 LDASNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYG 182

Query: 216 NGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVR 275
            G +  + YR++R SPDYG RRSPSPY+++ RGSP+YGR R  N SP RRER  S     
Sbjct: 183 RGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVAS----- 242

Query: 276 PPSHSPHP-HQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGH 335
           P  +S  P ++RER +       + SP+ +E  SP +G G   SP   R+R RS+P+NG 
Sbjct: 243 PTKYSRSPNNKRERMSP------NHSPFKKE--SPRNGVGEVESPIERRERSRSSPENGQ 302

Query: 336 EQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE 365
            +   +         Y G +SP  K R   SP A+E
Sbjct: 303 VESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of MC06g1972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	3.4e-107	61.73	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	8.6e-103	59.37	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	5.6e-70	55.21	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.1e-62	48.37	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q08170	5.9e-11	28.18	Serine/arginine-rich splicing factor 4 OS=Homo sapiens OX=9606 GN=SRSF4 PE=1 SV=...	[more]

BLAST of MC06g1972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159582.1	1.92e-244	96.17	serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]	[more]
XP_038904888.1	8.41e-231	92.68	serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]	[more]
XP_022159586.1	2.18e-229	99.40	serine/arginine-rich splicing factor RS40-like [Momordica charantia]	[more]
XP_008449100.1	4.77e-219	89.21	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis me...	[more]
XP_011650503.1	2.06e-217	88.38	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]

BLAST of MC06g1972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E078	9.28e-245	96.17	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1E4D4	1.06e-229	99.40	serine/arginine-rich splicing factor RS40-like OS=Momordica charantia OX=3673 GN...	[more]
A0A1S4DXA1	2.31e-219	89.21	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VJB8	2.31e-219	89.21	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A0A0L2A0	1.44e-217	88.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1	[more]

BLAST of MC06g1972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	2.4e-108	61.73	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	2.4e-108	61.73	arginine/serine-rich splicing factor 35	[more]
AT5G52040.1	6.1e-104	59.37	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	1.4e-103	59.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	3.2e-89	59.82	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..70 e-value: 3.8E-15 score: 66.3 coord: 106..172 e-value: 3.3E-16 score: 69.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 107..169 e-value: 4.7E-12 score: 45.6 coord: 4..62 e-value: 2.9E-13 score: 49.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..74 score: 16.448967
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 105..176 score: 15.016313
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..99 e-value: 1.4E-19 score: 72.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 100..186 e-value: 8.1E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..207
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..214
None	No IPR available	PANTHER	PTHR23147:SF159	BNAC08G47240D PROTEIN	coord: 4..214
None	No IPR available	CDD	cd12234	RRM1_AtRSp31_like	coord: 2..73 e-value: 6.62751E-37 score: 126.089
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 85..181
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1972.1	MC06g1972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding