MC06g1948 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1948
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein of unknown function (DUF565)
Location	MC06: 26987716 .. 26988186 (-)
RNA-Seq Expression	MC06g1948
Synteny	MC06g1948

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGGTCTGTAAGTTTACTCTCTACTGGCCTCCTAAGTTGTGGCTTTTGTCCCAAAATGGATGCTTCATATTTGAGTTATGACATGATAAAACCACGACCATCCCCTCGTAGTCTTCGTATCAAAGCTGTGCAAGATGATGGAGGTCCTCGTAGTCGTAGGTTAGTTGATATCATTAGACTTGTGCCCGAGCTCTCGAGAAATTACTTTCGAAGCCCCTCGAGGAGGGCTCTGTTTGGAGGGATCTCATTATTGGGTGGGTTTTATGTAGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTCCTTACAGAGTACGTTACCCGGTTTTATTATAGTCGACCGAAAGTAACTTTCCCCATAGCTCTACTCAACAACTTCAAAATGGGTTTCACTTATGGTCTCTTTATTGATGCTTTCAAACTTGCTAGT

mRNA sequence

ATGGCACGGTCTGTAAGTTTACTCTCTACTGGCCTCCTAAGTTGTGGCTTTTGTCCCAAAATGGATGCTTCATATTTGAGTTATGACATGATAAAACCACGACCATCCCCTCGTAGTCTTCGTATCAAAGCTGTGCAAGATGATGGAGGTCCTCGTAGTCGTAGGTTAGTTGATATCATTAGACTTGTGCCCGAGCTCTCGAGAAATTACTTTCGAAGCCCCTCGAGGAGGGCTCTGTTTGGAGGGATCTCATTATTGGGTGGGTTTTATGTAGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTCCTTACAGAGTACGTTACCCGGTTTTATTATAGTCGACCGAAAGTAACTTTCCCCATAGCTCTACTCAACAACTTCAAAATGGGTTTCACTTATGGTCTCTTTATTGATGCTTTCAAACTTGCTAGT

Coding sequence (CDS)

ATGGCACGGTCTGTAAGTTTACTCTCTACTGGCCTCCTAAGTTGTGGCTTTTGTCCCAAAATGGATGCTTCATATTTGAGTTATGACATGATAAAACCACGACCATCCCCTCGTAGTCTTCGTATCAAAGCTGTGCAAGATGATGGAGGTCCTCGTAGTCGTAGGTTAGTTGATATCATTAGACTTGTGCCCGAGCTCTCGAGAAATTACTTTCGAAGCCCCTCGAGGAGGGCTCTGTTTGGAGGGATCTCATTATTGGGTGGGTTTTATGTAGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTCCTTACAGAGTACGTTACCCGGTTTTATTATAGTCGACCGAAAGTAACTTTCCCCATAGCTCTACTCAACAACTTCAAAATGGGTTTCACTTATGGTCTCTTTATTGATGCTTTCAAACTTGCTAGT

Protein sequence

MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

Homology

[Close]

BLAST of MC06g1948 vs. ExPASy Swiss-Prot
Match: Q1XDS2 (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 62  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 121
           L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  +
Sbjct: 13  LIKNLNNKLYYSLSELTT-GLISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAATELTS 72

Query: 122 RFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS 158
           +  YS  K +   I L NNFK+G TYGLF+DAFKL S
Sbjct: 73  KIVYSSHKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

[Close]

BLAST of MC06g1948 vs. ExPASy Swiss-Prot
Match: P72983 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 55  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCV 114
           RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +
Sbjct: 5   RLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAFIL 64

Query: 115 LLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDAFKLAS 158
           L  E V R++Y R          +LN FKMG +Y LF++AFKL S
Sbjct: 65  LFCELVNRWFYRRGVKMGDLQAEVLNIFKMGVSYSLFLEAFKLGS 109

[Close]

BLAST of MC06g1948 vs. ExPASy Swiss-Prot
Match: P51214 (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-08
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 81  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNN 140
           G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN
Sbjct: 31  GLISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAAIELVSKIVYSNKKKYGVRINLLNN 90

Query: 141 FKMGFTYGLFIDAFKLAS 158
            K+G TYGLF+DAFKL S
Sbjct: 91  LKIGITYGLFVDAFKLGS 108

[Close]

BLAST of MC06g1948 vs. ExPASy Swiss-Prot
Match: Q9MUL5 (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 85  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL--- 144
           LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F I+ L   
Sbjct: 35  LLLGFFIATVLATVFGQTGDWDVLVAGILVAMIEILGNKMYSKKYISKKQVFDISFLSLI 94

Query: 145 --NNFKMGFTYGLFIDAFKLAS 158
             N  K+G  +GLF+DAFKL S
Sbjct: 95  GINYIKIGLIFGLFVDAFKLGS 116

[Close]

BLAST of MC06g1948 vs. NCBI nr
Match: KAG6579671.1 (hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266 bits (679), Expect = 7.58e-89
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YDMIK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDMIKSRPSPRSLCIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPEISRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. NCBI nr
Match: XP_022969949.1 (uncharacterized protein ycf20 [Cucurbita maxima] >XP_022969950.1 uncharacterized protein ycf20 [Cucurbita maxima])

HSP 1 Score: 265 bits (678), Expect = 1.08e-88
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YD+IK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLGIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. NCBI nr
Match: XP_022928979.1 (uncharacterized protein ycf20 [Cucurbita moschata] >XP_022928980.1 uncharacterized protein ycf20 [Cucurbita moschata])

HSP 1 Score: 265 bits (677), Expect = 1.53e-88
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YD+IK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. NCBI nr
Match: XP_023549885.1 (uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo] >XP_023549886.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264 bits (675), Expect = 3.09e-88
Identity = 137/157 (87.26%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YD+IK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPEISRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. NCBI nr
Match: XP_004143642.1 (uncharacterized protein ycf20 [Cucumis sativus] >KGN50402.1 hypothetical protein Csa_000018 [Cucumis sativus])

HSP 1 Score: 263 bits (672), Expect = 9.15e-88
Identity = 138/158 (87.34%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSP-RSLRIKAVQDDGGPRSRRLVDI 60
           MA+S SL+ T LL+ GF PKM+ SY  YDM+K RPSP RS R+KAVQD GGPR  RLVDI
Sbjct: 1   MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPR--RLVDI 60

Query: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120
           IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY
Sbjct: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120

Query: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156

[Close]

BLAST of MC06g1948 vs. ExPASy TrEMBL
Match: A0A6J1I440 (uncharacterized protein ycf20 OS=Cucurbita maxima OX=3661 GN=LOC111468994 PE=3 SV=1)

HSP 1 Score: 265 bits (678), Expect = 5.22e-89
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YD+IK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLGIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. ExPASy TrEMBL
Match: A0A6J1ESY7 (uncharacterized protein ycf20 OS=Cucurbita moschata OX=3662 GN=LOC111435716 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 7.41e-89
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDII 60
           MA+S SL+STGLL+  F P+ +ASY  YD+IK RPSPRSL IKAVQD GGPR  RLVDII
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPR--RLVDII 60

Query: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120
           RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV
Sbjct: 61  RLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYV 120

Query: 121 TRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           TRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of MC06g1948 vs. ExPASy TrEMBL
Match: A0A0A0KPS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172820 PE=3 SV=1)

HSP 1 Score: 263 bits (672), Expect = 4.43e-88
Identity = 138/158 (87.34%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSP-RSLRIKAVQDDGGPRSRRLVDI 60
           MA+S SL+ T LL+ GF PKM+ SY  YDM+K RPSP RS R+KAVQD GGPR  RLVDI
Sbjct: 1   MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPR--RLVDI 60

Query: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120
           IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY
Sbjct: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120

Query: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156

[Close]

BLAST of MC06g1948 vs. ExPASy TrEMBL
Match: A0A1S3CT33 (uncharacterized protein ycf20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504644 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 8.94e-88
Identity = 138/158 (87.34%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MARSVSLLSTGLLSCGFCPKMDASYLSYDMIKPRPSP-RSLRIKAVQDDGGPRSRRLVDI 60
           MA+S SL+ TGLL+ GF  KM++SY  YDM+K RPSP RS R+KAVQD GGPR  RLVDI
Sbjct: 1   MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPR--RLVDI 60

Query: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120
           IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY
Sbjct: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120

Query: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 157
           VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156

[Close]

BLAST of MC06g1948 vs. ExPASy TrEMBL
Match: A0A5D3BMH1 (Ycf20-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00540 PE=3 SV=1)

HSP 1 Score: 241 bits (614), Expect = 1.56e-79
Identity = 126/138 (91.30%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 21  MDASYLSYDMIKPRPSP-RSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRAL 80
           M+ SY  YDM+K RPSP RS R+KAVQD GGPR  RLVDIIRLVPELSRNYFRSPSRRAL
Sbjct: 1   MNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPR--RLVDIIRLVPELSRNYFRSPSRRAL 60

Query: 81  FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNN 140
           FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNN
Sbjct: 61  FGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNN 120

Query: 141 FKMGFTYGLFIDAFKLAS 157
           FKMGFTYGLFIDAFKLAS
Sbjct: 121 FKMGFTYGLFIDAFKLAS 136

[Close]

BLAST of MC06g1948 vs. TAIR 10
Match: AT5G43050.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-52
Identity = 113/161 (70.19%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MARSVSLLSTGL----LSCGFCPKMDASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRL 60
           MA S+S +ST L    L+   C     +++S    + R   RS+R  A+Q+  GP  RRL
Sbjct: 1   MAHSLSFISTNLNSLVLNHHQCQSF-GTFVSSPFKRKRRFARSIR--ALQETEGPTPRRL 60

Query: 61  VDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLL 120
           +DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLL
Sbjct: 61  IDIIRSVPEISRNYFKKPSRRTLFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLL 120

Query: 121 TEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 158
           TEYVTRFYYSR  VTFPIALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 TEYVTRFYYSRTTVTFPIALLNNFKMGFTYGLFIDAFKLAS 158

[Close]

BLAST of MC06g1948 vs. TAIR 10
Match: AT1G65420.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 28/80 (35.00%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 85  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALL 144
           LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +
Sbjct: 118 LLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFM 177

Query: 145 NNFKMGFTYGLFIDAFKLAS 158
           N +K G   GLF+DAFKL S
Sbjct: 178 NFWKAGVCLGLFVDAFKLGS 197

The following BLAST results are available for this feature:

BLAST of MC06g1948 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1XDS2	5.3e-09	42.27	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
P72983	2.6e-08	35.24	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P51214	5.9e-08	47.44	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
Q9MUL5	3.0e-04	37.80	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]

BLAST of MC06g1948 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579671.1	7.58e-89	87.90	hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022969949.1	1.08e-88	87.90	uncharacterized protein ycf20 [Cucurbita maxima] >XP_022969950.1 uncharacterized...	[more]
XP_022928979.1	1.53e-88	87.90	uncharacterized protein ycf20 [Cucurbita moschata] >XP_022928980.1 uncharacteriz...	[more]
XP_023549885.1	3.09e-88	87.26	uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo] >XP_023549886....	[more]
XP_004143642.1	9.15e-88	87.34	uncharacterized protein ycf20 [Cucumis sativus] >KGN50402.1 hypothetical protein...	[more]

BLAST of MC06g1948 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I440	5.22e-89	87.90	uncharacterized protein ycf20 OS=Cucurbita maxima OX=3661 GN=LOC111468994 PE=3 S...	[more]
A0A6J1ESY7	7.41e-89	87.90	uncharacterized protein ycf20 OS=Cucurbita moschata OX=3662 GN=LOC111435716 PE=3...	[more]
A0A0A0KPS1	4.43e-88	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172820 PE=3 SV=1	[more]
A0A1S3CT33	8.94e-88	87.34	uncharacterized protein ycf20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504644...	[more]
A0A5D3BMH1	1.56e-79	91.30	Ycf20-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of MC06g1948 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43050.1	1.8e-52	70.19	Protein of unknown function (DUF565)	[more]
AT1G65420.1	1.8e-04	35.00	Protein of unknown function (DUF565)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 103..157 e-value: 1.4E-18 score: 67.1
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 1..157
None	No IPR available	PANTHER	PTHR33787:SF5	YCF20-LIKE PROTEIN	coord: 1..157
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..15 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1948.1	MC06g1948.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane