MC06g1938 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1938
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTrehalose-phosphatase
LocationMC06: 26800004 .. 26800570 (+)
RNA-Seq ExpressionMC06g1938
SyntenyMC06g1938
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT

mRNA sequence

ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT

Coding sequence (CDS)

ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT

Protein sequence

MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGDGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT
Homology
BLAST of MC06g1938 vs. NCBI nr
Match: KAA0037648.1 (hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (486), Expect = 1.76e-58
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
           M KT++IL KKL+ELELQL H+ L+     +LSQE  QKF+F+ANLLSAE ASCPTE  P
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60

Query: 61  RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEAKSCL 120
           R L H+ARRL+QLEA F       D   D  HV+DSS C CTESCLND++E      SCL
Sbjct: 61  RRLRHMARRLAQLEAGFWS----PDMLADNGHVNDSSTCWCTESCLNDDSEVVS-GSSCL 120

Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVF-IQF 180
           E D+ +GGE FYECV  EKE EKE R+IVG+GKL   GAMASGF+IGM LMGVAVF I+F
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVGKLN--GAMASGFVIGMVLMGVAVFSIEF 180

Query: 181 SGYLQLQHNGGFVTPT 189
            GY Q+Q NGGFV PT
Sbjct: 181 FGYFQVQQNGGFVIPT 187

BLAST of MC06g1938 vs. NCBI nr
Match: KGN51765.2 (hypothetical protein Csa_009074, partial [Cucumis sativus])

HSP 1 Score: 158 bits (399), Expect = 1.97e-45
Identity = 107/187 (57.22%), Postives = 129/187 (68.98%), Query Frame = 0

Query: 10  KKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EPRHLSHIARR 69
           KKL+ELELQL H+ L+     +LSQE  QK +F+ANLL+AE ASCP+  +PR L H+ARR
Sbjct: 1   KKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKPRRLKHMARR 60

Query: 70  LSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGDGGE 129
           L+QLEA F   DL +        VDDS+ C CTESCLND++E      SCLE D+ +GGE
Sbjct: 61  LAQLEAVFWSPDLVDNGQ-----VDDSTTCLCTESCLNDDSEVVS-GSSCLE-DEMEGGE 120

Query: 130 -FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVA-VFIQFSGYLQLQHN 189
            FYECV  EKE EKE R+IVG+ KL   GAM SGF+IG+  MGVA  FI+  GY Q Q N
Sbjct: 121 CFYECVEGEKE-EKEERKIVGVVKLN--GAMVSGFVIGVVSMGVANFFIELFGYFQHQQN 177

BLAST of MC06g1938 vs. NCBI nr
Match: KAG6605709.1 (Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159 bits (401), Expect = 3.79e-42
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHL 60
           M KT++IL KKLEELE Q+  + +    S L Q+I QK++F+ANLLSAE ASCP++PRHL
Sbjct: 1   MTKTYAILRKKLEELERQVQLSRNNVHPSLL-QDIHQKWLFIANLLSAEVASCPSKPRHL 60

Query: 61  SHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDG 120
            HIARRL+QLE AFR+  + ED  +DHVDD S CSCTESCLND+    D A SCL+ D+ 
Sbjct: 61  KHIARRLAQLEPAFRNC-KAED-LVDHVDDVSTCSCTESCLNDDG---DVASSCLD-DEK 120

Query: 121 DGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLI 160
           +GGEFYECV  EKE EKE R++V +G L   GAMASG LI
Sbjct: 121 EGGEFYECVENEKE-EKEERKMVRVGTL--WGAMASGCLI 150

BLAST of MC06g1938 vs. NCBI nr
Match: GAV87896.1 (hypothetical protein CFOL_v3_31320 [Cephalotus follicularis])

HSP 1 Score: 120 bits (302), Expect = 1.59e-30
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
           M K ++IL +KL+ELE +L  A+S   Q  T   +Q+I+Q FVF+ NLLSAE A  P++P
Sbjct: 1   MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60

Query: 61  RHLSHIARRLSQLEAAFRDLGEGEDYFLD-HVDDSSACSCTESCLNDENENEDEAKSCLE 120
           RHL+H+  RL++LE +F      +    D H++  S CSCTESCLND+ E      S + 
Sbjct: 61  RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-----ASAVS 120

Query: 121 GDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFLIG 180
           G  G +  E Y               C+  +++ ++E ++++ +G    CG MASG ++G
Sbjct: 121 GSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVGTY--CGVMASGVVVG 180

Query: 181 MALMGVAVFIQFSGYLQLQHNGGFVTPT 189
           +ALMG+ V ++FSG       G F+TPT
Sbjct: 181 VALMGL-VMVKFSGCFHYVEYGSFMTPT 200

BLAST of MC06g1938 vs. NCBI nr
Match: KAE8022375.1 (hypothetical protein FH972_008178 [Carpinus fangiana])

HSP 1 Score: 119 bits (299), Expect = 6.61e-30
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
           M K +SIL +KL+ LE +L    S   T+  SQ    +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1   MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60

Query: 61  PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDS--SACSCTESCLNDENENEDEA--- 120
           P HL HI +RL+QLE  FR     +   L+H DD   S CSCTESCLND+ E   E    
Sbjct: 61  PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120

Query: 121 ----------KSCLEGDDGDGGE-------FYECVVEEKEDEK---ERREIVGIGKLIIC 180
                     ++ +E   G   E        ++ +VEEK +++   E+R  VG+G    C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180

Query: 181 GAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT 189
           GAMA G ++GMALMG  V ++FSG         F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215

BLAST of MC06g1938 vs. ExPASy TrEMBL
Match: A0A5A7T4C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G003110 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 8.54e-59
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
           M KT++IL KKL+ELELQL H+ L+     +LSQE  QKF+F+ANLLSAE ASCPTE  P
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60

Query: 61  RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEAKSCL 120
           R L H+ARRL+QLEA F       D   D  HV+DSS C CTESCLND++E      SCL
Sbjct: 61  RRLRHMARRLAQLEAGFWS----PDMLADNGHVNDSSTCWCTESCLNDDSEVVS-GSSCL 120

Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVF-IQF 180
           E D+ +GGE FYECV  EKE EKE R+IVG+GKL   GAMASGF+IGM LMGVAVF I+F
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVGKLN--GAMASGFVIGMVLMGVAVFSIEF 180

Query: 181 SGYLQLQHNGGFVTPT 189
            GY Q+Q NGGFV PT
Sbjct: 181 FGYFQVQQNGGFVIPT 187

BLAST of MC06g1938 vs. ExPASy TrEMBL
Match: A0A0A0KUA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.46e-49
Identity = 112/196 (57.14%), Postives = 136/196 (69.39%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EP 60
           M KT++IL KKL+ELELQL H+ L+     +LSQE  QK +F+ANLL+AE ASCP+  +P
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60

Query: 61  RHLSHIARRLSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCL 120
           R L H+ARRL+QLEA F   DL +        VDDS+ C CTESCLND++E      SCL
Sbjct: 61  RRLKHMARRLAQLEAVFWSPDLVDNGQ-----VDDSTTCLCTESCLNDDSEVVS-GSSCL 120

Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVA-VFIQF 180
           E D+ +GGE FYECV  EKE EKE R+IVG+ KL   GAM SGF+IG+  MGVA  FI+ 
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVVKLN--GAMVSGFVIGVVSMGVANFFIEL 180

Query: 181 SGYLQLQHNGGFVTPT 189
            GY Q Q NGGFV PT
Sbjct: 181 FGYFQHQQNGGFVIPT 186

BLAST of MC06g1938 vs. ExPASy TrEMBL
Match: A0A1Q3D5V2 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 7.68e-31
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
           M K ++IL +KL+ELE +L  A+S   Q  T   +Q+I+Q FVF+ NLLSAE A  P++P
Sbjct: 1   MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60

Query: 61  RHLSHIARRLSQLEAAFRDLGEGEDYFLD-HVDDSSACSCTESCLNDENENEDEAKSCLE 120
           RHL+H+  RL++LE +F      +    D H++  S CSCTESCLND+ E      S + 
Sbjct: 61  RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-----ASAVS 120

Query: 121 GDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFLIG 180
           G  G +  E Y               C+  +++ ++E ++++ +G    CG MASG ++G
Sbjct: 121 GSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVGTY--CGVMASGVVVG 180

Query: 181 MALMGVAVFIQFSGYLQLQHNGGFVTPT 189
           +ALMG+ V ++FSG       G F+TPT
Sbjct: 181 VALMGL-VMVKFSGCFHYVEYGSFMTPT 200

BLAST of MC06g1938 vs. ExPASy TrEMBL
Match: A0A5N6R0N0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 3.20e-30
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 0

Query: 1   MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
           M K +SIL +KL+ LE +L    S   T+  SQ    +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1   MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60

Query: 61  PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDS--SACSCTESCLNDENENEDEA--- 120
           P HL HI +RL+QLE  FR     +   L+H DD   S CSCTESCLND+ E   E    
Sbjct: 61  PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120

Query: 121 ----------KSCLEGDDGDGGE-------FYECVVEEKEDEK---ERREIVGIGKLIIC 180
                     ++ +E   G   E        ++ +VEEK +++   E+R  VG+G    C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180

Query: 181 GAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT 189
           GAMA G ++GMALMG  V ++FSG         F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215

BLAST of MC06g1938 vs. ExPASy TrEMBL
Match: A0A7J7CAC6 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 2.17e-29
Identity = 85/194 (43.81%), Postives = 110/194 (56.70%), Query Frame = 0

Query: 6   SILHKKLEELELQLHHALSQTPTST----LSQEIQQKFVFMANLLSAEAASCPTEPRHLS 65
           SIL KKL+ LE +L+ ALS  P S      S++I+Q+F F+  LLSAE AS P    HL 
Sbjct: 7   SILQKKLQRLESKLNEALSLPPDSPHHDRYSRDIEQRFAFLKTLLSAELASQPANSHHLQ 66

Query: 66  HIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGD 125
           HI R L++LEAA+ D    +   LDH+D +S CSCTESC ND+ E + +     EG D D
Sbjct: 67  HIERTLNELEAAYHDWNNFKTSTLDHIDTASTCSCTESCFNDD-EGDGQVDVGSEGFD-D 126

Query: 126 GGEFYECVVEEK----EDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVFIQFSGYL 185
           G +  E   EE+    E  KE  EI        C  M SG +IGM LMG  V ++FSG  
Sbjct: 127 GEKIVEGQSEERAVGVEIVKEEEEIRVWTWKSYCRNMVSGMVIGMVLMG-GVMVRFSGCF 186

Query: 186 Q--LQHNGGFVTPT 189
              +++N  FV PT
Sbjct: 187 NNSVEYNS-FVAPT 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0037648.11.76e-5862.76hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa][more]
KGN51765.21.97e-4557.22hypothetical protein Csa_009074, partial [Cucumis sativus][more]
KAG6605709.13.79e-4260.63Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita a... [more]
GAV87896.11.59e-3038.46hypothetical protein CFOL_v3_31320 [Cephalotus follicularis][more]
KAE8022375.16.61e-3040.37hypothetical protein FH972_008178 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
A0A5A7T4C48.54e-5962.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KUA11.46e-4957.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1[more]
A0A1Q3D5V27.68e-3138.46Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4... [more]
A0A5N6R0N03.20e-3040.37Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1[more]
A0A7J7CAC62.17e-2943.81Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1938.1MC06g1938.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009853 photorespiration
cellular_component GO:0016020 membrane
molecular_function GO:0008453 alanine-glyoxylate transaminase activity
molecular_function GO:0047958 glycine:2-oxoglutarate aminotransferase activity
molecular_function GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity