Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
mRNA sequence
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
Coding sequence (CDS)
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACCTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTATGGCTTTAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
Protein sequence
MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGDGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT
Homology
BLAST of MC06g1938 vs. NCBI nr
Match:
KAA0037648.1 (hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa])
HSP 1 Score: 191 bits (486), Expect = 1.76e-58
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QKF+F+ANLLSAE ASCPTE P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEAKSCL 120
R L H+ARRL+QLEA F D D HV+DSS C CTESCLND++E SCL
Sbjct: 61 RRLRHMARRLAQLEAGFWS----PDMLADNGHVNDSSTCWCTESCLNDDSEVVS-GSSCL 120
Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVF-IQF 180
E D+ +GGE FYECV EKE EKE R+IVG+GKL GAMASGF+IGM LMGVAVF I+F
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVGKLN--GAMASGFVIGMVLMGVAVFSIEF 180
Query: 181 SGYLQLQHNGGFVTPT 189
GY Q+Q NGGFV PT
Sbjct: 181 FGYFQVQQNGGFVIPT 187
BLAST of MC06g1938 vs. NCBI nr
Match:
KGN51765.2 (hypothetical protein Csa_009074, partial [Cucumis sativus])
HSP 1 Score: 158 bits (399), Expect = 1.97e-45
Identity = 107/187 (57.22%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 10 KKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EPRHLSHIARR 69
KKL+ELELQL H+ L+ +LSQE QK +F+ANLL+AE ASCP+ +PR L H+ARR
Sbjct: 1 KKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKPRRLKHMARR 60
Query: 70 LSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGDGGE 129
L+QLEA F DL + VDDS+ C CTESCLND++E SCLE D+ +GGE
Sbjct: 61 LAQLEAVFWSPDLVDNGQ-----VDDSTTCLCTESCLNDDSEVVS-GSSCLE-DEMEGGE 120
Query: 130 -FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVA-VFIQFSGYLQLQHN 189
FYECV EKE EKE R+IVG+ KL GAM SGF+IG+ MGVA FI+ GY Q Q N
Sbjct: 121 CFYECVEGEKE-EKEERKIVGVVKLN--GAMVSGFVIGVVSMGVANFFIELFGYFQHQQN 177
BLAST of MC06g1938 vs. NCBI nr
Match:
KAG6605709.1 (Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 159 bits (401), Expect = 3.79e-42
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHL 60
M KT++IL KKLEELE Q+ + + S L Q+I QK++F+ANLLSAE ASCP++PRHL
Sbjct: 1 MTKTYAILRKKLEELERQVQLSRNNVHPSLL-QDIHQKWLFIANLLSAEVASCPSKPRHL 60
Query: 61 SHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDG 120
HIARRL+QLE AFR+ + ED +DHVDD S CSCTESCLND+ D A SCL+ D+
Sbjct: 61 KHIARRLAQLEPAFRNC-KAED-LVDHVDDVSTCSCTESCLNDDG---DVASSCLD-DEK 120
Query: 121 DGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLI 160
+GGEFYECV EKE EKE R++V +G L GAMASG LI
Sbjct: 121 EGGEFYECVENEKE-EKEERKMVRVGTL--WGAMASGCLI 150
BLAST of MC06g1938 vs. NCBI nr
Match:
GAV87896.1 (hypothetical protein CFOL_v3_31320 [Cephalotus follicularis])
HSP 1 Score: 120 bits (302), Expect = 1.59e-30
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
M K ++IL +KL+ELE +L A+S Q T +Q+I+Q FVF+ NLLSAE A P++P
Sbjct: 1 MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD-HVDDSSACSCTESCLNDENENEDEAKSCLE 120
RHL+H+ RL++LE +F + D H++ S CSCTESCLND+ E S +
Sbjct: 61 RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-----ASAVS 120
Query: 121 GDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFLIG 180
G G + E Y C+ +++ ++E ++++ +G CG MASG ++G
Sbjct: 121 GSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVGTY--CGVMASGVVVG 180
Query: 181 MALMGVAVFIQFSGYLQLQHNGGFVTPT 189
+ALMG+ V ++FSG G F+TPT
Sbjct: 181 VALMGL-VMVKFSGCFHYVEYGSFMTPT 200
BLAST of MC06g1938 vs. NCBI nr
Match:
KAE8022375.1 (hypothetical protein FH972_008178 [Carpinus fangiana])
HSP 1 Score: 119 bits (299), Expect = 6.61e-30
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
M K +SIL +KL+ LE +L S T+ SQ +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1 MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60
Query: 61 PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDS--SACSCTESCLNDENENEDEA--- 120
P HL HI +RL+QLE FR + L+H DD S CSCTESCLND+ E E
Sbjct: 61 PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120
Query: 121 ----------KSCLEGDDGDGGE-------FYECVVEEKEDEK---ERREIVGIGKLIIC 180
++ +E G E ++ +VEEK +++ E+R VG+G C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180
Query: 181 GAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT 189
GAMA G ++GMALMG V ++FSG F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215
BLAST of MC06g1938 vs. ExPASy TrEMBL
Match:
A0A5A7T4C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G003110 PE=4 SV=1)
HSP 1 Score: 191 bits (486), Expect = 8.54e-59
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QKF+F+ANLLSAE ASCPTE P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEAKSCL 120
R L H+ARRL+QLEA F D D HV+DSS C CTESCLND++E SCL
Sbjct: 61 RRLRHMARRLAQLEAGFWS----PDMLADNGHVNDSSTCWCTESCLNDDSEVVS-GSSCL 120
Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVF-IQF 180
E D+ +GGE FYECV EKE EKE R+IVG+GKL GAMASGF+IGM LMGVAVF I+F
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVGKLN--GAMASGFVIGMVLMGVAVFSIEF 180
Query: 181 SGYLQLQHNGGFVTPT 189
GY Q+Q NGGFV PT
Sbjct: 181 FGYFQVQQNGGFVIPT 187
BLAST of MC06g1938 vs. ExPASy TrEMBL
Match:
A0A0A0KUA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1)
HSP 1 Score: 168 bits (425), Expect = 1.46e-49
Identity = 112/196 (57.14%), Postives = 136/196 (69.39%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EP 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QK +F+ANLL+AE ASCP+ +P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60
Query: 61 RHLSHIARRLSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCL 120
R L H+ARRL+QLEA F DL + VDDS+ C CTESCLND++E SCL
Sbjct: 61 RRLKHMARRLAQLEAVFWSPDLVDNGQ-----VDDSTTCLCTESCLNDDSEVVS-GSSCL 120
Query: 121 EGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGMALMGVA-VFIQF 180
E D+ +GGE FYECV EKE EKE R+IVG+ KL GAM SGF+IG+ MGVA FI+
Sbjct: 121 E-DEMEGGECFYECVEGEKE-EKEERKIVGVVKLN--GAMVSGFVIGVVSMGVANFFIEL 180
Query: 181 SGYLQLQHNGGFVTPT 189
GY Q Q NGGFV PT
Sbjct: 181 FGYFQHQQNGGFVIPT 186
BLAST of MC06g1938 vs. ExPASy TrEMBL
Match:
A0A1Q3D5V2 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4 SV=1)
HSP 1 Score: 120 bits (302), Expect = 7.68e-31
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
M K ++IL +KL+ELE +L A+S Q T +Q+I+Q FVF+ NLLSAE A P++P
Sbjct: 1 MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD-HVDDSSACSCTESCLNDENENEDEAKSCLE 120
RHL+H+ RL++LE +F + D H++ S CSCTESCLND+ E S +
Sbjct: 61 RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-----ASAVS 120
Query: 121 GDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFLIG 180
G G + E Y C+ +++ ++E ++++ +G CG MASG ++G
Sbjct: 121 GSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVGTY--CGVMASGVVVG 180
Query: 181 MALMGVAVFIQFSGYLQLQHNGGFVTPT 189
+ALMG+ V ++FSG G F+TPT
Sbjct: 181 VALMGL-VMVKFSGCFHYVEYGSFMTPT 200
BLAST of MC06g1938 vs. ExPASy TrEMBL
Match:
A0A5N6R0N0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1)
HSP 1 Score: 119 bits (299), Expect = 3.20e-30
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
M K +SIL +KL+ LE +L S T+ SQ +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1 MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60
Query: 61 PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDS--SACSCTESCLNDENENEDEA--- 120
P HL HI +RL+QLE FR + L+H DD S CSCTESCLND+ E E
Sbjct: 61 PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120
Query: 121 ----------KSCLEGDDGDGGE-------FYECVVEEKEDEK---ERREIVGIGKLIIC 180
++ +E G E ++ +VEEK +++ E+R VG+G C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180
Query: 181 GAMASGFLIGMALMGVAVFIQFSGYLQLQHNGGFVTPT 189
GAMA G ++GMALMG V ++FSG F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215
BLAST of MC06g1938 vs. ExPASy TrEMBL
Match:
A0A7J7CAC6 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 PE=4 SV=1)
HSP 1 Score: 117 bits (292), Expect = 2.17e-29
Identity = 85/194 (43.81%), Postives = 110/194 (56.70%), Query Frame = 0
Query: 6 SILHKKLEELELQLHHALSQTPTST----LSQEIQQKFVFMANLLSAEAASCPTEPRHLS 65
SIL KKL+ LE +L+ ALS P S S++I+Q+F F+ LLSAE AS P HL
Sbjct: 7 SILQKKLQRLESKLNEALSLPPDSPHHDRYSRDIEQRFAFLKTLLSAELASQPANSHHLQ 66
Query: 66 HIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEAKSCLEGDDGD 125
HI R L++LEAA+ D + LDH+D +S CSCTESC ND+ E + + EG D D
Sbjct: 67 HIERTLNELEAAYHDWNNFKTSTLDHIDTASTCSCTESCFNDD-EGDGQVDVGSEGFD-D 126
Query: 126 GGEFYECVVEEK----EDEKERREIVGIGKLIICGAMASGFLIGMALMGVAVFIQFSGYL 185
G + E EE+ E KE EI C M SG +IGM LMG V ++FSG
Sbjct: 127 GEKIVEGQSEERAVGVEIVKEEEEIRVWTWKSYCRNMVSGMVIGMVLMG-GVMVRFSGCF 186
Query: 186 Q--LQHNGGFVTPT 189
+++N FV PT
Sbjct: 187 NNSVEYNS-FVAPT 196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0037648.1 | 1.76e-58 | 62.76 | hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa] | [more] |
KGN51765.2 | 1.97e-45 | 57.22 | hypothetical protein Csa_009074, partial [Cucumis sativus] | [more] |
KAG6605709.1 | 3.79e-42 | 60.63 | Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita a... | [more] |
GAV87896.1 | 1.59e-30 | 38.46 | hypothetical protein CFOL_v3_31320 [Cephalotus follicularis] | [more] |
KAE8022375.1 | 6.61e-30 | 40.37 | hypothetical protein FH972_008178 [Carpinus fangiana] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T4C4 | 8.54e-59 | 62.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0KUA1 | 1.46e-49 | 57.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1 | [more] |
A0A1Q3D5V2 | 7.68e-31 | 38.46 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4... | [more] |
A0A5N6R0N0 | 3.20e-30 | 40.37 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1 | [more] |
A0A7J7CAC6 | 2.17e-29 | 43.81 | Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 ... | [more] |
Match Name | E-value | Identity | Description | |