MC06g1877 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1877
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTrafficking protein particle complex subunit
LocationMC06: 26131101 .. 26135439 (-)
RNA-Seq ExpressionMC06g1877
SyntenyMC06g1877
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACACTCTATGCAATTTCCCCCTTTTCTCTGTGCTATGCTATCTGTATCATTTCGTTTCCCTGGAACTCCGAATGATACGACTCCCAATTTGACACTTGACTTCATTTCCGGATCTGGGTCGGCCTAGATTTCACACGCTTCTGCTGCATTAACGATCCTGTGAATTGTAATTTTTCCAATTTATTTTCTCTTCCCCTTTACCAGACTAGATCCCTTGTATTATCTATGCTTTCTCTTATCACCTCCCTCATGATCCCACCAAGGAAAACGAGTTAGATCAGTGGAGAAGCGGGGAAGAACGGAATTCTTAATTGCTTCATTAGGCAACTGATTGTAGAGTTGAGTGAAAATGTTGGGGTTTTGTCAGGATCTCATATTTGTAGGCCATTTTCTCGTGATAACTGATTTGATTCGATTTAGTTTGTTCCAGAAACCATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGGTTTATTTTTCTTCCTTCACTGGGAAATTACTTTTGTGTATGGCGTGCCTAGTTTAAGGAATGATCCAACAGGATAGGAGTGATACGAGCCATATTTTTGTCTTAATAACTTGACAAACGCATCTATATTTTATGGTTGGTAGCAATTACTATTTGATTGTAGTTTTTTATCTTGAATTTTCTAAAGTCGTACCTCATCGAAGAATGATGAGCTGCGTTCGGAGTTTGGTTTGAAGTTATAGCTTTCTCTTTTTCATTTTTTGGTACAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGGTTGGTTTAACCTTTCTCCCTCTACTCTCCTCTATATTTGCCGCTGTAGTTTAATGCATGTCTACTTGAATAGTTGATTTAAATATCTTGATATATGACACAATCAACCCAGACCTAATGCATCGTCTGGAGCAAACTAGATATGAATATTTGAGATTTAATGAAACCAATATTTGTTCTGTGTGATTGTTATTAGTTTGTGTTCTCTGAACCTGTTGTGCTACATGGATAATTTAAGTTTTCATTTGAACCTTGTTAAATGTTCTTGGATTTTGTCTTGTTCTTATAATGTTCAGTTTACTTGGTGATAGTTAGTACTACGAAAGGACCTCCTCCTTTTTTGTTTCTTGTTTTTCCTTGAAGAATTAAAGTTGGACTTTTGGAAGAAGCCGTGTGACACTGCTGTTTTAATTGTCACTGCGTTTTAAAAACAATTAACCAGTGATGCAAAATGGAATCCTGGCCATGAACTATAATAGTATAATGTCGTATCGCTCGAGATTGATAAATTAGTCAACAGTTCAATTTTGGAGCATTGATGGATTATTTCCTTGTTTTCAGATTATTCTGGTTACCCATCCTAGAACCAGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGGTAAATTGTTACTCGTTAGCTTTGACTGTGCATACTTCCTATATACCAACAGTATGTTTGATTCAAAGAAATTTTGTTTGAACTCTTGCAAAATAAAATCAATATTTTTTATGAATTTGAACTTTGTAGTGTATGCATCCATTTGTATCAGTTTAGTAATGATCAAATGAAGTCTGGCATAAGGAAACTTATCTTCGGTGCTTGCACTTTAACTATAGCATTTTAAGTACGCCTTCGAGGTGTTTTTAGGGATCTTTTAGGCTTTACTAGATTCTCCTTTAGGTTGAATTACCACTTTAGTCTCTGTGATTTGAGCTTGGTTTTAATTTGGTTCCTATGGTTTTAGAAAGTCCTTATGGTTTGGTTAAGTCTCGCAAAATTTCTATGCAATTACCATATATTAGCAGAGCAGTTTTCTTACGTCACATATGTGTGTGTGTGAAGGTTAAATTGGCTTAGCGTATTAAAGTTCGGTAAAAAACTAAAAGAAACTGGATGGGTTCTTAGTTAAAGAGGAAACGAGTTTGTGTAGAAAATTGGTGGTTTTTGTTTTTTGGTGACTAGGCTTTTTCAGAAATGGGAAGTGGGGCAATTTGTGACTAAAAGTGGGCTGCACAACTTGCTGTCCTTTATTGTGTGTGTGTAAAGTCGATTAGTTTGTCGAATAGCTTAAAGAATGTGTGAAGGTTAAATTGGCTGAATGTATTAAAGTTTAGTAAAAAAAATAAAAGAAATTGGATGGGTTCGGGCTTTTTCATAAATGGGAAGTGGGGCAACTTGTGACTAAAAGGTCGGCTGCACAACTTGCTTTCCTTTATTTCTTACCCAACCCAAACCAGAATGTTGTCAAACCTTCAGGAGATACCTTATATTGAATGGCAGCTCATTGCACGTCTTAAGAAAAAGAGTCACATAAGAAAACTATTATCTAATAATGGTACAGACAGTTTTGGGAGATTTAACCGAGCTATAGGAACCACAATGAAAATTTTAAAACTATATAAACCAAATTGAAACCAAATTCAACCTATACGACTAAAATGTTAATTTAACCCTTCTTTTACGAGACAGTCATACATTGGGTAATATACCTCCTTTTGTTAATTTTTTCTGTCTACTTTTTTCAACAAAAGATTAGAAATGTTACAAAATATTTTTTATGGACTTATACCACCCCCCTCAAACAACCATGCTTGCGATGACATAGTTTTTAGGATGAAAATGAAACCATTCTTGTTTGTCCTCGCAACACACTAGCGACAATCCCTCGATTATTGATTTGATTTTTCTTTCTACAGGTGTGAGTTATTCAATACAAGTCTTGACCAATATGTAAGAAGCATATCATAGAAATGAAGGGTAGTAACTGCTCTGCCATTTTAGTTTCATTCAAGACGTATGCTCTGTCTGTCTTTTGTTGATAGGCATGAATGCGTTTCATTGAAGAACGGTGCAGTTGCCAAAAAATTCCTACCTGTGAGTTTCTTTTTTTATTCCATTGGTTGGACTGTAGAGAGTGCACGGGTATGAAATATTCGAGTTTTTTTGTTTCCTTTTCTTTTTTCTTTTTCCTCCCAGAACATTTGTGGTAAGTTGGTAACTTCTGGTGCTCTGTGATAGCGGTTGAAGGAGAATATATATATATATATTAGATTTTTTAGTACAAATGTTTACTGCTCATGTATGAGTTGTTTCAAACGGGAGAGGATTATGATCAATTACCTTATCAACCTCTTCCAGCCTTTCATCGTCTCTTCATCAGTTTCCTGGTATTGGTTTCAACCATAGCATGCACCACCCTTCTAAATGTAGGTGAAAGATTGTTGGGTTCCTAAGTCATCGAAAATGGATCTGGGTGCTTTAAGGTTGAGAGGCCTCGACCCGGAAAAAAAAGGAAAGAGATGTTTGGGATTATGGTTAGCTCTCTCAAAAGGAGTTCCCTAGAATTTCTTACAATACAGGATTATAGCAGGAAAAAGATTGGGCTCTGGGTCTACCCTGCATTTGATTCCTGATATGTAGCTAATTGTTGTTGCCTAAATATGCGTTTGTGCGCTCGACACGATGGCATTGTTGTTTCTTCCCTGGATTCTGCCGAGCTCTTTGTTAAATCTCTCTTTGGTTTCTCTGCTCGGCACTGCATTGGTGGAGGCTTTATCATTTAACCTTAGCTCAAAGTTGCACCTTGCTCCCTAGGCTAGAAGGATGGCAATTATCATTGGATCTGGTTGGAAGATGCTCCCCAAATGGCTTCAGAGGACAGTAACTCCTTCCATTGTATGAGTACATCTAATCCGTTTTCGGTTTGGTAGCTCGTGGCATAACCCCGAACCGTTCACCTGGTTCAACTATTAACTGTCTTGTGATAAAGTTGTGGAGTCGATGGTAGCAAAACCAAGTTACCTAGTTTAAATTGGGGTTCCATAGTCATGATCTGTTAGCACTTCTATTCTGTATTGTGGTGTGCCCTCCGTATATTTCATCTTTGAGTTCCTCCGGCCCATTTTATATCGTTCTCATTTCTTGTTACTTGAATAAAGTCATTATTGTATTTGGTAACTATTTCTAATTCTTTATTATTATTATTATTATTATTGAAAAAGAAGGTAACCAT

mRNA sequence

GTACACTCTATGCAATTTCCCCCTTTTCTCTGTGCTATGCTATCTGTATCATTTCGTTTCCCTGGAACTCCGAATGATACGACTCCCAATTTGACACTTGACTTCATTTCCGGATCTGGGTCGGCCTAGATTTCACACGCTTCTGCTGCATTAACGATCCTGTGAATTGTAATTTTTCCAATTTATTTTCTCTTCCCCTTTACCAGACTAGATCCCTTGTATTATCTATGCTTTCTCTTATCACCTCCCTCATGATCCCACCAAGGAAAACGAGTTAGATCAGTGGAGAAGCGGGGAAGAACGGAATTCTTAATTGCTTCATTAGGCAACTGATTGTAGAAAACCATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATTCTGGTTACCCATCCTAGAACCAGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGGTGTGAGTTATTCAATACAAGTCTTGACCAATATGTAAGAAGCATATCATAGAAATGAAGGGTAGTAACTGCTCTGCCATTTTAGTTTCATTCAAGACGTATGCTCTGTCTGTCTTTTGTTGATAGGCATGAATGCGTTTCATTGAAGAACGGTGCAGTTGCCAAAAAATTCCTACCTGTGAGTTTCTTTTTTTATTCCATTGGTTGGACTGTAGAGAGTGCACGGGTATGAAATATTCGAGTTTTTTTGTTTCCTTTTCTTTTTTCTTTTTCCTCCCAGAACATTTGTGGTAAGTTGGTAACTTCTGGTGCTCTGTGATAGCGGTTGAAGGAGAATATATATATATATATTAGATTTTTTAGTACAAATGTTTACTGCTCATGTATGAGTTGTTTCAAACGGGAGAGGATTATGATCAATTACCTTATCAACCTCTTCCAGCCTTTCATCGTCTCTTCATCAGTTTCCTGGTATTGGTTTCAACCATAGCATGCACCACCCTTCTAAATGTAGGTGAAAGATTGTTGGGTTCCTAAGTCATCGAAAATGGATCTGGGTGCTTTAAGGTTGAGAGGCCTCGACCCGGAAAAAAAAGGAAAGAGATGTTTGGGATTATGGTTAGCTCTCTCAAAAGGAGTTCCCTAGAATTTCTTACAATACAGGATTATAGCAGGAAAAAGATTGGGCTCTGGGTCTACCCTGCATTTGATTCCTGATATGTAGCTAATTGTTGTTGCCTAAATATGCGTTTGTGCGCTCGACACGATGGCATTGTTGTTTCTTCCCTGGATTCTGCCGAGCTCTTTGTTAAATCTCTCTTTGGTTTCTCTGCTCGGCACTGCATTGGTGGAGGCTTTATCATTTAACCTTAGCTCAAAGTTGCACCTTGCTCCCTAGGCTAGAAGGATGGCAATTATCATTGGATCTGGTTGGAAGATGCTCCCCAAATGGCTTCAGAGGACAGTAACTCCTTCCATTGTATGAGTACATCTAATCCGTTTTCGGTTTGGTAGCTCGTGGCATAACCCCGAACCGTTCACCTGGTTCAACTATTAACTGTCTTGTGATAAAGTTGTGGAGTCGATGGTAGCAAAACCAAGTTACCTAGTTTAAATTGGGGTTCCATAGTCATGATCTGTTAGCACTTCTATTCTGTATTGTGGTGTGCCCTCCGTATATTTCATCTTTGAGTTCCTCCGGCCCATTTTATATCGTTCTCATTTCTTGTTACTTGAATAAAGTCATTATTGTATTTGGTAACTATTTCTAATTCTTTATTATTATTATTATTATTATTGAAAAAGAAGGTAACCAT

Coding sequence (CDS)

ATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATTCTGGTTACCCATCCTAGAACCAGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGGTGTGAGTTATTCAATACAAGTCTTGACCAATATGTAAGAAGCATATCATAG

Protein sequence

MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS
Homology
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BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match: Q5NCF2 (Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trappc1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.6e-30
Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNP-QQDHKLMFGLLFSLRSFTAKMDPTSTDKGNL 82
           VH +Y+F+RNGVCL Y EW+R  +   P ++++KLM+G+LFS+RSF +KM P     G  
Sbjct: 3   VHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG-- 62

Query: 83  GVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYN-LYVEYV 142
                      F SF+T+ YKL + ETP+GIK+++ T      +RD L +IY+ LYVE+V
Sbjct: 63  -----------FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFV 122

Query: 143 VKNPLYSPGTPIRCELFNTSLDQYVRSI 169
           VKNPL   G  ++ ELF + LD YVRS+
Sbjct: 123 VKNPLCPLGQTVQSELFRSRLDSYVRSL 137

[Close]
BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match: Q2KMM2 (Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.6e-30
Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNP-QQDHKLMFGLLFSLRSFTAKMDPTSTDKGNL 82
           VH +Y+F+RNGVCL Y EW+R  +   P ++++KLM+G+LFS+RSF +KM P     G  
Sbjct: 3   VHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG-- 62

Query: 83  GVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYN-LYVEYV 142
                      F SF+T+ YKL + ETP+GIK+++ T      +RD L +IY+ LYVE+V
Sbjct: 63  -----------FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFV 122

Query: 143 VKNPLYSPGTPIRCELFNTSLDQYVRSI 169
           VKNPL   G  ++ ELF + LD YVRS+
Sbjct: 123 VKNPLCPLGQTVQSELFRSRLDSYVRSL 137

[Close]
BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match: Q557G3 (Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=trappc1-1 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.7e-30
Identity = 57/147 (38.78%), Postives = 93/147 (63.27%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLRSFTAKMDPTSTDKGNLG 82
           ++ +YIFN++G C++Y +WN+  ++ N  +D KL+FG+L+SL++F     P   D     
Sbjct: 2   IYNIYIFNKDGTCIYYEDWNKKKQSQNQSEDQKLLFGMLYSLKAFITSSSPKKID----- 61

Query: 83  VPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYN-LYVEYVV 142
                     FH ++T+TYKL + ET S IK I+++ P   DLRD LK IY+ ++VEYV+
Sbjct: 62  ------DKTGFHCYKTSTYKLHYYETLSCIKFIIMSDPNVPDLRDDLKKIYSQIFVEYVI 121

Query: 143 KNPLYSPGTPIRCELFNTSLDQYVRSI 169
           KNP+Y  GT ++C+ F   L+ Y++ +
Sbjct: 122 KNPIYKHGTTVKCDTFINQLNLYLKQM 137

[Close]
BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match: Q17QI1 (Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNP-QQDHKLMFGLLFSLRSFTAKMDPTSTDKGNL 82
           VH +Y+F+RNGVCL Y EW+R  +   P ++++KLM+G+LFS+RSF +KM P     G  
Sbjct: 3   VHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG-- 62

Query: 83  GVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYN-LYVEYV 142
                      F +F+T+ YKL + ETP+GIK+++ T      +RD L +IY+ LYVE V
Sbjct: 63  -----------FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELV 122

Query: 143 VKNPLYSPGTPIRCELFNTSLDQYVRSI 169
           VKNPL   G  ++ ELF + LD YVRS+
Sbjct: 123 VKNPLCPLGQTVQSELFRSRLDSYVRSL 137

[Close]
BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match: Q9Y5R8 (Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNP-QQDHKLMFGLLFSLRSFTAKMDPTSTDKGNL 82
           VH +Y+F+RNGVCL Y EW+R  +   P ++++KLM+G+LFS+RSF +KM P     G  
Sbjct: 3   VHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG-- 62

Query: 83  GVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYN-LYVEYV 142
                      F +F+T+ YKL + ETP+GIK+++ T      +RD L +IY+ LYVE V
Sbjct: 63  -----------FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELV 122

Query: 143 VKNPLYSPGTPIRCELFNTSLDQYVRSI 169
           VKNPL   G  ++ ELF + LD YVRS+
Sbjct: 123 VKNPLCPLGQTVQSELFRSRLDSYVRSL 137

[Close]
BLAST of MC06g1877 vs. NCBI nr
Match: XP_022159770.1 (trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159771.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159772.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159773.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159774.1 trafficking protein particle complex subunit 1 [Momordica charantia])

HSP 1 Score: 357 bits (917), Expect = 1.02e-124
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169
           RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS
Sbjct: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. NCBI nr
Match: XP_008437540.1 (PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo] >XP_008437541.1 PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo])

HSP 1 Score: 348 bits (892), Expect = 6.66e-121
Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSVDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168
           RT DLRD LKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI
Sbjct: 121 RTGDLRDPLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168

[Close]
BLAST of MC06g1877 vs. NCBI nr
Match: XP_038906999.1 (trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000.1 trafficking protein particle complex subunit 1 [Benincasa hispida])

HSP 1 Score: 347 bits (891), Expect = 9.14e-121
Identity = 162/168 (96.43%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PT TGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTTTGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168
           RT DLRDSLKYIYNLYVEYVVKNP+YSPGTPIRCELFNTSLDQYVRSI
Sbjct: 121 RTGDLRDSLKYIYNLYVEYVVKNPIYSPGTPIRCELFNTSLDQYVRSI 168

[Close]
BLAST of MC06g1877 vs. NCBI nr
Match: XP_004145907.1 (trafficking protein particle complex subunit 1 [Cucumis sativus] >XP_031741655.1 trafficking protein particle complex subunit 1 [Cucumis sativus] >KGN49914.1 hypothetical protein Csa_000153 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 3.86e-120
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168
           RT DLRD LKYIYNLYVEYVVKNP+YSPGTPIRCELFNTSLDQYVR+I
Sbjct: 121 RTGDLRDPLKYIYNLYVEYVVKNPIYSPGTPIRCELFNTSLDQYVRTI 168

[Close]
BLAST of MC06g1877 vs. NCBI nr
Match: XP_022958611.1 (trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022958612.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022958613.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022958614.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022958615.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata])

HSP 1 Score: 343 bits (879), Expect = 6.40e-119
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNR+GVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRSGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169
           RT DLRDSLKYIYNLYVEY V+NPLYSPGT +RCELFNTSLDQYVRSIS
Sbjct: 121 RTGDLRDSLKYIYNLYVEYAVRNPLYSPGTTLRCELFNTSLDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match: A0A6J1DZQ0 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111026095 PE=3 SV=1)

HSP 1 Score: 357 bits (917), Expect = 4.96e-125
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169
           RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS
Sbjct: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match: A0A1S3AUA1 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103482924 PE=3 SV=1)

HSP 1 Score: 348 bits (892), Expect = 3.22e-121
Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSVDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168
           RT DLRD LKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI
Sbjct: 121 RTGDLRDPLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168

[Close]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match: A0A0A0KM26 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5G139910 PE=3 SV=1)

HSP 1 Score: 346 bits (887), Expect = 1.87e-120
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSI 168
           RT DLRD LKYIYNLYVEYVVKNP+YSPGTPIRCELFNTSLDQYVR+I
Sbjct: 121 RTGDLRDPLKYIYNLYVEYVVKNPIYSPGTPIRCELFNTSLDQYVRTI 168

[Close]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match: A0A6J1H402 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111459786 PE=3 SV=1)

HSP 1 Score: 343 bits (879), Expect = 3.10e-119
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNR+GVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRSGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169
           RT DLRDSLKYIYNLYVEY V+NPLYSPGT +RCELFNTSLDQYVRSIS
Sbjct: 121 RTGDLRDSLKYIYNLYVEYAVRNPLYSPGTTLRCELFNTSLDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match: A0A6J1K3I3 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111491351 PE=3 SV=1)

HSP 1 Score: 342 bits (876), Expect = 8.89e-119
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTATGNNVHMMYIFNR+GVCLFYREWNRPLRTLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRSGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+SFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 169
           RT DLRDSLKYIYNLYVEY V+NPLY+PGT +RCELFNTSLDQYVRSIS
Sbjct: 121 RTGDLRDSLKYIYNLYVEYAVRNPLYNPGTTLRCELFNTSLDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 5.7e-89
Identity = 147/169 (86.98%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTA+GNN HMMY+FNRNGVCL Y+EWNRPL TLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTASGNNAHMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+S TAKMDP + DKGNLGVPQLPGQGCSFHSFRTNTYKLSF ETPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPVNADKGNLGVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 170
           +T DLR+SLKYIY+LYVEYVVKNP+YSPG+PI+ ELFNT+LDQYVRSIS
Sbjct: 121 KTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIKSELFNTALDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 5.7e-89
Identity = 147/169 (86.98%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60
           MQFFGGSEISPSPP PTA+GNN HMMY+FNRNGVCL Y+EWNRPL TLNPQQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTASGNNAHMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGL 60

Query: 61  LFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120
           LFSL+S TAKMDP + DKGNLGVPQLPGQGCSFHSFRTNTYKLSF ETPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPVNADKGNLGVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILVTHP 120

Query: 121 RTSDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYVRSIS 170
           +T DLR+SLKYIY+LYVEYVVKNP+YSPG+PI+ ELFNT+LDQYVRSIS
Sbjct: 121 KTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIKSELFNTALDQYVRSIS 169

[Close]
BLAST of MC06g1877 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 9.3e-15
Identity = 44/146 (30.14%), Postives = 71/146 (48.63%), Query Frame = 0 

Query: 23  VHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLRSFTAKMDPTSTDKGNLG 82
           ++ +YI N++G  +FY++     R      D   +  L  S+ + + ++ P +       
Sbjct: 4   IYSLYIINKSGGLIFYKDCGTKGRM--DTNDSLRVASLWHSMHAISQQLSPVN------- 63

Query: 83  VPQLPGQGCS-FHSFRTNTYKLSFTETPSGIKIILVTHPRTSDLRDSLKYIYNLYVEYVV 142
                  GCS       +T+ L   ++  G K  +V  P T  +   L+YIY LY +YV+
Sbjct: 64  -------GCSGIELLEADTFDLHCFQSLPGTKFFVVCEPGTPHMESLLRYIYELYTDYVL 123

Query: 143 KNPLYSPGTPIRCELFNTSLDQYVRS 168
           KNP Y    PIRCELF+ +L Q V+S
Sbjct: 124 KNPFYEIEMPIRCELFDINLTQAVQS 133

The following BLAST results are available for this feature:
BLAST of MC06g1877 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5NCF22.6e-3045.95Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trapp... [more]
Q2KMM22.6e-3045.95Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=... [more]
Q557G37.7e-3038.78Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44... [more]
Q17QI11.7e-2945.27Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 ... [more]
Q9Y5R81.7e-2945.27Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC... [more]
BLAST of MC06g1877 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159770.11.02e-124100.00trafficking protein particle complex subunit 1 [Momordica charantia] >XP_0221597... [more]
XP_008437540.16.66e-12197.02PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo] >XP_008... [more]
XP_038906999.19.14e-12196.43trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000... [more]
XP_004145907.13.86e-12095.83trafficking protein particle complex subunit 1 [Cucumis sativus] >XP_031741655.1... [more]
XP_022958611.16.40e-11994.67trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022... [more]
BLAST of MC06g1877 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZQ04.96e-125100.00Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L... [more]
A0A1S3AUA13.22e-12197.02Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A0A0KM261.87e-12095.83Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5... [more]
A0A6J1H4023.10e-11994.67Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1K3I38.89e-11994.08Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
BLAST of MC06g1877 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G51160.15.7e-8986.98SNARE-like superfamily protein [more]
AT1G51160.25.7e-8986.98SNARE-like superfamily protein [more]
AT5G02280.19.3e-1530.14SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 23..168
e-value: 3.9E-65
score: 232.4
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 23..167
e-value: 3.0E-49
score: 166.6
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 1..168
NoneNo IPR availableGENE3D3.30.450.70coord: 22..169
e-value: 5.5E-49
score: 167.9
NoneNo IPR availablePANTHERPTHR23249:SF18TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKEcoord: 1..168
NoneNo IPR availableCDDcd14855TRAPPC1_MUM2coord: 24..164
e-value: 5.62046E-69
score: 203.547
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 23..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1877.1MC06g1877.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030008 TRAPP complex