MC06g1836 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1836
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 25663979 .. 25664110 (-)
RNA-Seq Expression	MC06g1836
Synteny	MC06g1836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTGGTTTCGGTAGTGGCGGAGCTTCTGGAGGAGTACACGGTTCTGCTCGCCGAGGTGCTGCGGCAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCT

mRNA sequence

ATGATGCTGGTTTCGGTAGTGGCGGAGCTTCTGGAGGAGTACACGGTTCTGCTCGCCGAGGTGCTGCGGCAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCT

Coding sequence (CDS)

ATGATGCTGGTTTCGGTAGTGGCGGAGCTTCTGGAGGAGTACACGGTTCTGCTCGCCGAGGTGCTGCGGCAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCT

Protein sequence

MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP

Homology

[Close]

BLAST of MC06g1836 vs. NCBI nr
Match: XP_022159655.1 (uncharacterized protein LOC111025999 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 1.11e-19
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. NCBI nr
Match: XP_022970120.1 (uncharacterized protein LOC111469109 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.73e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. NCBI nr
Match: XP_023520510.1 (uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.8 bits (190), Expect = 1.82e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. NCBI nr
Match: XP_022928978.1 (uncharacterized protein LOC111435715 [Cucurbita moschata])

HSP 1 Score: 77.8 bits (190), Expect = 2.02e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. NCBI nr
Match: KAG7017064.1 (hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.8 bits (190), Expect = 2.19e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. ExPASy TrEMBL
Match: A0A6J1DZC9 (uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025999 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.38e-20
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. ExPASy TrEMBL
Match: A0A6J1I1Z0 (uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.37e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. ExPASy TrEMBL
Match: A0A6J1EQP1 (uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC111435715 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.78e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTVLL EVLRQLF+SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. ExPASy TrEMBL
Match: A0A1S3AUP0 (uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.01e-16
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTV+L++VLRQLF SAPFPRRVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPRRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. ExPASy TrEMBL
Match: A0A0A0KM75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.85e-16
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 44
          MMLVSV+AE+LEEYTV+L++VLRQLF SAPFP RVRFLILHNLP
Sbjct: 1  MMLVSVLAEILEEYTVVLSDVLRQLFYSAPFPHRVRFLILHNLP 44

[Close]

BLAST of MC06g1836 vs. TAIR 10
Match: AT1G33055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-08
Identity = 25/44 (56.82%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLP 45
          M+LV+++AE+++EYTV+LA V+  LF+ APFPRR+R  IL++LP
Sbjct: 1  MLLVTLIAEMMKEYTVVLAGVVEHLFSQAPFPRRIRLHILYSLP 44

The following BLAST results are available for this feature:

BLAST of MC06g1836 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1836 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159655.1	1.11e-19	100.00	uncharacterized protein LOC111025999 [Momordica charantia]	[more]
XP_022970120.1	1.73e-17	90.91	uncharacterized protein LOC111469109 [Cucurbita maxima]	[more]
XP_023520510.1	1.82e-17	90.91	uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo]	[more]
XP_022928978.1	2.02e-17	90.91	uncharacterized protein LOC111435715 [Cucurbita moschata]	[more]
KAG7017064.1	2.19e-17	90.91	hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MC06g1836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZC9	5.38e-20	100.00	uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1I1Z0	8.37e-18	90.91	uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109...	[more]
A0A6J1EQP1	9.78e-18	90.91	uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]
A0A1S3AUP0	1.01e-16	86.36	uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=...	[more]
A0A0A0KM75	5.85e-16	84.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1	[more]

BLAST of MC06g1836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33055.1	2.9e-08	56.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobi...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48175	OS04G0581700 PROTEIN	coord: 1..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1836.1	MC06g1836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity