MC06g1795 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1795
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 25229652 .. 25230878 (-)
RNA-Seq Expression	MC06g1795
Synteny	MC06g1795

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGAGCCCAAGCAATCAAGAGGATCCCTCGAATCAAGTTTCCCAAACGCCATCCCAACCCCTCTGGTCTGCATCCACCTTTTTCTTACTTTTCTTTCTTCTTCTTCTTCTTCTTATTATTATGATGAATCGATGATCGTCCTCAAGGAAAACTAATCTTCTCTACCTGAATCGAAATCGCTAGGCTTTCTCCCTGTCGTTCCGTTCATGATTTTTGACTTGTTCTTCATGGATGATTTCTCTTTGGAAAATCCTTGACATGACCTGTATTTGTGGCTGTGGTTCTGTGTTCGTCCGTTTGGTTTTAATTTGATTGCTTAGAGTTGGGATTTTTTTTTAGTCTCTTGTGTGGGTAATGATTTCTATTTAAGTTCTAGCCTGTTTCAGCTTGATGATGGAGATCCTGATGCATTTATGTGGACCGCCATGGTGATTAAAGAATACAAGAGTGTGCTATTAATTTGTTATCTTCTAGCTATGCTGGCTTAACTTTGATTTTTCTACTTTTGGATAGCATTTTTAACCTGGATTTTGAAATCTAATGACACAGATGAGTAAAATAGAATGAAACTTAATTCAGAGAAGAGAGGGGGGAGAGAGAGAGAGAGATTGGGTTTTGTGAGAATTTCAATTTGATCCATAGGTTTCCTGATTCGAGGATGTTTGTATGAGAGGGAAATTGACTTTTATGCCTGTTTCCACTTCTATTAGTACCTCATTATCTAAGAACTGCATTTGGAATGCTTAGAATCAAGAACTCTTGTGAAATATTACCAATGATGGTTATTTAACATTTGAGAAATCCTTCTATATTTCTATGCCTGTTTCAGTCTGCCTCATCAATTCCGTAGTTGACATGAAACCTAACATTACCACCTCTTCGAAAAGAAAGGAACACCTAGTTGATGCATTAACATGTTTATTAATAGCCATTTTTTGGATGATCATAATTCATTAGTGAGTCGAAGTATCGTGTAATATCGGTCATTGGATTCTGCCTCGATAATACGTCTTCTCAAAGTTATCTACCACTTGTTTTATGAACATAGCAACTACTGAAGAAAGTTTTTTCAGGTTCTACTTCCCAGACTCCATCAAACCTTGGGGTCGATGATCAAGTTATCTTCTCAACTGGAAATGTTTTGAAAACTGTGGGAGGAAAAGCTTCCCTTCAGCCTAAGAGGACACCGATGTCTAACGAGGAGATTGAGGCTGTTTTGGTA

mRNA sequence

ATGGGTGGAGCCCAAGCAATCAAGAGGATCCCTCGAATCAAGTTTCCCAAACGCCATCCCAACCCCTCTGGTTCTACTTCCCAGACTCCATCAAACCTTGGGGTCGATGATCAAGTTATCTTCTCAACTGGAAATGTTTTGAAAACTGTGGGAGGAAAAGCTTCCCTTCAGCCTAAGAGGACACCGATGTCTAACGAGGAGATTGAGGCTGTTTTGGTA

Coding sequence (CDS)

ATGGGTGGAGCCCAAGCAATCAAGAGGATCCCTCGAATCAAGTTTCCCAAACGCCATCCCAACCCCTCTGGTTCTACTTCCCAGACTCCATCAAACCTTGGGGTCGATGATCAAGTTATCTTCTCAACTGGAAATGTTTTGAAAACTGTGGGAGGAAAAGCTTCCCTTCAGCCTAAGAGGACACCGATGTCTAACGAGGAGATTGAGGCTGTTTTGGTA

Protein sequence

MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKRTPMSNEEIEAVLV

Homology

[Close]

BLAST of MC06g1795 vs. NCBI nr
Match: XP_022156457.1 (uncharacterized protein LOC111023342 [Momordica charantia])

HSP 1 Score: 147 bits (371), Expect = 1.87e-44
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR 60
          MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR 60

Query: 61 TPMSNEEIEAVLV 73
          TPMSNEEIEAVL+
Sbjct: 61 TPMSNEEIEAVLL 73

[Close]

BLAST of MC06g1795 vs. NCBI nr
Match: KAG7035504.1 (hypothetical protein SDJN02_02300 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125 bits (315), Expect = 8.03e-36
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGN--VLKTVGGKASLQP 60
          MGGAQA+KRIPRIKFPKRHPNPSGSTSQTP+++GVDDQV+F + N    KT+GGKASLQP
Sbjct: 1  MGGAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTPMSNEEIEA+LV
Sbjct: 61 KRTPMSNEEIEAILV 75

[Close]

BLAST of MC06g1795 vs. NCBI nr
Match: XP_023534508.1 (uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo] >KAG6605594.1 hypothetical protein SDJN03_02911, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124 bits (312), Expect = 1.99e-35
Identity = 60/75 (80.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGN--VLKTVGGKASLQP 60
          MGGAQA+KRIPRIKFPKRHPNPSGSTSQTP+++GVDDQV+F + N    KT+GGKASLQP
Sbjct: 1  MGGAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTPMSNEEIEA+L+
Sbjct: 61 KRTPMSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. NCBI nr
Match: XP_038875405.1 (uncharacterized protein LOC120067868 [Benincasa hispida])

HSP 1 Score: 122 bits (306), Expect = 1.64e-34
Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFST--GNVLKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHPNPSGSTS+TPS+ GVDDQ+ FS+      KTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSKTPSSSGVDDQIFFSSLEQTASKTVGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTP+SNEEIEA+L+
Sbjct: 61 KRTPLSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. NCBI nr
Match: XP_022958002.1 (uncharacterized protein LOC111459363 [Cucurbita moschata] >XP_022996319.1 uncharacterized protein LOC111491585 [Cucurbita maxima])

HSP 1 Score: 121 bits (303), Expect = 4.71e-34
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGN--VLKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHPNPSGSTSQTP+++GVDDQV+F + N    KT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTPMSNEEIEA+L+
Sbjct: 61 KRTPMSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. ExPASy TrEMBL
Match: A0A6J1DS43 (uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023342 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 9.03e-45
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR 60
          MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR 60

Query: 61 TPMSNEEIEAVLV 73
          TPMSNEEIEAVL+
Sbjct: 61 TPMSNEEIEAVLL 73

[Close]

BLAST of MC06g1795 vs. ExPASy TrEMBL
Match: A0A6J1K8D8 (uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 2.28e-34
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGN--VLKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHPNPSGSTSQTP+++GVDDQV+F + N    KT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTPMSNEEIEA+L+
Sbjct: 61 KRTPMSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. ExPASy TrEMBL
Match: A0A6J1H0Q6 (uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC111459363 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 2.28e-34
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGN--VLKTVGGKASLQP 60
          MG AQA+KRIPRIKFPKRHPNPSGSTSQTP+++GVDDQV+F + N    KT+GGKASLQP
Sbjct: 1  MGVAQALKRIPRIKFPKRHPNPSGSTSQTPTSIGVDDQVLFLSLNEKASKTIGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTPMSNEEIEA+L+
Sbjct: 61 KRTPMSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. ExPASy TrEMBL
Match: A0A1S3AUJ6 (uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 4.26e-30
Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFST--GNVLKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRHP+ SGSTS+TPS+ G DD + FS+   +  KTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KR P+SNEEIEA+L+
Sbjct: 61 KRIPLSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. ExPASy TrEMBL
Match: A0A0A0KMD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1)

HSP 1 Score: 109 bits (272), Expect = 1.22e-29
Identity = 56/75 (74.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFST--GNVLKTVGGKASLQP 60
          MGGAQAIKRIPRIKFPKRH + SGSTS+TPS+ G DD V FS+   +  KTVGGKASLQP
Sbjct: 1  MGGAQAIKRIPRIKFPKRHLSSSGSTSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQP 60

Query: 61 KRTPMSNEEIEAVLV 73
          KRTP+SNEEIEA+L+
Sbjct: 61 KRTPLSNEEIEAILL 75

[Close]

BLAST of MC06g1795 vs. TAIR 10
Match: AT4G23885.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 1  MGGAQAIKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFSTGNVLKTVGGKASLQPKR 60
          M     +KRIPRIKFP+RH NPS S  ++      D     +  N+ KT GGKAS QPKR
Sbjct: 1  MNVVHGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTTGGKASSQPKR 60

Query: 61 TPMSNEEIEAVLV 74
          TP+SNEE+EA+L+
Sbjct: 61 TPVSNEEMEAILL 73

[Close]

BLAST of MC06g1795 vs. TAIR 10
Match: AT5G24165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 3.3e-09
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 7  IKRIPRIKFPKRHPNPSGSTSQTPSNLGVDDQVIFST----GNVLKTVGGKASLQPKRTP 66
          ++RIPRIKFP+RH   SGS     S  GV   V  S+           GGKASLQPKRTP
Sbjct: 1  MRRIPRIKFPQRHSISSGSGPAPGSVSGVKKNVTASSDVPAAPKNTADGGKASLQPKRTP 60

Query: 67 MSNEEIEAVLV 74
          +S++EIE++++
Sbjct: 61 VSDKEIESIML 71

The following BLAST results are available for this feature:

BLAST of MC06g1795 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1795 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156457.1	1.87e-44	98.63	uncharacterized protein LOC111023342 [Momordica charantia]	[more]
KAG7035504.1	8.03e-36	81.33	hypothetical protein SDJN02_02300 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534508.1	1.99e-35	80.00	uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo] >KAG6605594.1 ...	[more]
XP_038875405.1	1.64e-34	80.00	uncharacterized protein LOC120067868 [Benincasa hispida]	[more]
XP_022958002.1	4.71e-34	78.67	uncharacterized protein LOC111459363 [Cucurbita moschata] >XP_022996319.1 unchar...	[more]

BLAST of MC06g1795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS43	9.03e-45	98.63	uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1K8D8	2.28e-34	78.67	uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585...	[more]
A0A6J1H0Q6	2.28e-34	78.67	uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A1S3AUJ6	4.26e-30	73.33	uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=...	[more]
A0A0A0KMD8	1.22e-29	74.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1	[more]

BLAST of MC06g1795 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23885.1	6.9e-15	52.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24165.1	3.3e-09	47.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	PANTHER	PTHR35751:SF4	BNAA03G46330D PROTEIN	coord: 5..73
None	No IPR available	PANTHER	PTHR35751	FAMILY NOT NAMED	coord: 5..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1795.1	MC06g1795.1	mRNA