MC06g1768 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1768
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	zinc finger HIT domain-containing protein 3
Location	MC06: 24940158 .. 24943967 (-)
RNA-Seq Expression	MC06g1768
Synteny	MC06g1768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGGTATAACGATTTTGTCCAGAAAACTGAAAACCCTTCGTCGGACGGTGAAGCCAGGCGCCAAATCGATTTGTTGCTTGATCTGAGAGCCGGCGATTTCGCTTCTCGAACCCGAAATCGGTAGGGCCTCTGCTTTTCTTCTGGTTTCTGCTCATTCGCCTGTGAATCCATGGTTAGAAGTCCGATTGTTTGGTTAGAACATGCTGAATTCGTTTTTTCTTCCTTTTCTCTTGTCCTGATTTCCTCCTTTCGATTCTATGTTTGCTTGAACTTGAAGTGATCCATAATATATCGGTACATGTTTCGCTAATGTGCCTCTGATTGTGGAATGATCAAGTGTAGTTTAAGTTGATGTAACAGCTCTAGCATTAGTTCTAATGGCGAATTCTTACCCTCCGGACAGAATTTCAACTTCATTATTGAGATAGAAGCAAACTATCGTCGTCACTTCCTGCTTGAAAGTTCTCTTTTCTGAAAATTTTTTATATATGAAATGTGTGTGTGTGTGGATTTGGATCGACATGTTATGTTATATCTCAGAATTTTAGTGGGCCTTCTTATTTATCCATATTACGCTGCAGCATTTGGGACTGAAAATTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTAGTAAGACAAACTAAAGGATTTATTTTATGTTACTTTCGTGTATTTTGATCGAAAACTTTCTGACCTTTCTTCACTTTCGTCTCATTTTTCTCAAAGCTGCTCTCTGGTTTGTTTCAAGAAACACAAAGGTACTGTTATTGAAAACTTGGATACTCTTGTTGTATTTGGGTTGTATGTTATAATTTTTGTAAGCAGTTTCATATTCATATGGTCTTTAGTTCTAGAACAACTATCAAGAAATGAAAGTTTGGATAGACAACCAAATTGATCACGAATACTATTTGCTTCAAAACCTACAGTGCTGTTGCCTTGTTTTCTTGAAGGAGGGAAAATTTTTTGTACCTTTTATAAGAATGAATTGATATTAACTTGAGGGTCTGGAATCTGTTAAATGCTTATTAGTTACGTTTTTTAAGCTATGTTACTTGAATGTATGGCTCCAATAAATAGTTCATAGGGTTTTCTTTTGTAATTCTACTCACTTTCTGTGATTAATGTTCTATTCTATTAGTATGATGTCTTACGTAATGTGCCACTTGTGCAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAAGTAAGACTAACTCTATTCTCATGCTGAATGCACATTCGTAGACAGCTGAATAAATGTCTTATGGAGTTCCTTCCTGATTCTAGCCTTCCTGGGTGCTGTAGAAGTTAATTATCTTTCTTTTCCCCATTCATTCTTCAAGCATTCTTTTTGCTCACCGAGTTTTTTGTTCTCTGTTTTCAGCTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCCATCGGTATTGATTCATGATTACTGACTTATTTACCTCAATTTATACATGGGTCATTTGGGCCCATAAAACACTTGACATGCCTTTATAATTCTTTGTAAGAGAAATATAAAAAATTTATGATGATTATGAGAGACAAAAAAATCTTCAGTTGTCGAAGTGAGAAATGATTACAGGATTAGGTCACATGATAATTCTAGGATAAGATAGCCTTTTGAAACATTTGTATGGCTGAACTGCCGTTGGATGGTAAAATATTTTTTGAGGGGGTTTAAAGTTTGAACAATTTAACAATTTCTATGTCGATGAGAAGCTAGGCAGGGAAACTCTGTTTGTTTATCACGGTTTTATTTGTGTGTTAAGAATAACTTTGTAGCTTGTTATTAGGACATTAATGAACCTACAATCTGGGTTTTTTACCACTTATCCTTGTGCATCTTTCAACAGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGTGAGTTGTCTTCATGTTCCATTACGTGGGAAATTTGACTCTTATAACAAAATATTGCCCCATTATACTTACCAGCAAATTCTAGTGAATGTGAACATCAATAATTAAAGTTGTTGGCTTAATTTGGTTATATTAATTGTTCTCATTAGGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGGTATTATTTTCAGTTAAAGTGTTCTCATATATTTACGTTCTTCTACTACTTGGGACGCGGTTGTTACAAGCATGTCAGATAAATGATTTTGTTTTCCTTGAGCATTTATTCCCGTTTCTGTGTTGGTAGATATCATCGATCATTGGCTCCTAGCCCCAGCAATCACGGATGGAGGACAGAAAACACTAGTTCGAAGACATCCGTATAATCAACGGGGAATTTCTGCCCCCTTACCTTAAGTACTCAGCTCAGCAGATGCTGGAATCAAGGATGTGGAAACGACACTTCTTCTCGGAATGAAGTAAGCTGGGGGAGAGACCATCCAAGCGTTTAGCTGAAATGTGTAATGGTGATAGATTTGACAAGTTTAGCAATGATGTATGGTCTTCTCGTCTTTTCCTCTTTTTAAACGCTGTGTTTGTGTATTCAAACTCTCGTGTGTTTAATGCTTTCTAGGCTCAATAGTTTGTAGGAAGTCATGTTTTTGACTGAGTGCAATTGAATGATCAAACCGAAAGTTGAACGTTTTATATCATGTTGCTCCCGAAAACTTTGCTCCGACTCACAAAGTTAGAAATTGAATTTGGAACGACTTTTCCATACGAAAAGTACTGTTATTTGAAGCACTCGCTCATACTTTTGGTTTACAAAAATGCTGAAAATGAAATTAGAAGTATCAATAAGATTTGAAAGAGATGATATATGAAATCTAGCCATTTGAATTTTCAAAACATGAGTACGAGTTAAAGATGTTGTAAACCATATAGGTGAAATATATGATTATCTCAAAATTTTGATGCATTACAGTTCTAATCATTAGGAGAAGAACAGTTTGGAGAACATTGGAAACACATCTCCAACAAAGGCTACCCAAAGAACTACCTTCAGAATCAAAAAGCAAGTATATATTGCTTAAAGTTTGATAATGGAGAAAGTATTTCCAACTCCAAAATGTGAAAGAAGACATTTCTTCGAACAGTTTCAAACACACTTCTGATAATCTTCATCACATATATAAACCTTCAGGCACACCTTCTTTCTTCTTGTACATAACCTTCTCCTTTGCCTTTTTGAAGTCGGCATGTGTGACCTGAAGTGGAAGACAACATCAAAAGAACAGCTTAAGCCTCACTTCACTGTCATTTAATCAACTCGATGTACTAAACGACTTAGATAAACTGTTCAGCCCCCATCCATTATCTCTAGCAATATAGACCCGAAATTTCATGAAGTTTGATAGTCTAAAAACTTGAAAATTATTCATCAAAGTCTAAAGATGTGAATTTTTAAAACCAACACCACCACAGATTCTTTGAAACTAAGTTAATCAATCATTAGAGGTGGAAAAGTTGTATCCCATCATAGTTCTTAGAAAACTGAGGCAACTATTACCTTCATGCGCCTTTCCCTCAGAGCAAGCAACCCAGCTTCAGTACATATGGCCTTTATATCAGCACCAGAGAATTCATCTTTGGTCATCACAAATTCCTCTAAGTTGACATCATCTGCCAATGTCATTCTTGATGTGTGAATCTGCAAGTCAG

mRNA sequence

TACGGTATAACGATTTTGTCCAGAAAACTGAAAACCCTTCGTCGGACGGTGAAGCCAGGCGCCAAATCGATTTGTTGCTTGATCTGAGAGCCGGCGATTTCGCTTCTCGAACCCGAAATCGCATTTGGGACTGAAAATTGAACATTCTATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAACTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCCATCGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGATATCATCGATCATTGGCTCCTAGCCCCAGCAATCACGGATGGAGGACAGAAAACACTAGTTCGAAGACATCCGTATAATCAACGGGGAATTTCTGCCCCCTTACCTTAAGTACTCAGCTCAGCAGATGCTGGAATCAAGGATGTGGAAACGACACTTCTTCTCGGAATGAAGTAAGCTGGGGGAGAGACCATCCAAGCGTTTAGCTGAAATGTGTAATGGTGATAGATTTGACAAGTTTAGCAATGATGTATGGTCTTCTCGTCTTTTCCTCTTTTTAAACGCTGTGTTTGTGTATTCAAACTCTCGTGTGTTTAATGCTTTCTAGGCTCAATAGTTTGTAGGAAGTCATGTTTTTGACTGAGTGCAATTGAATGATCAAACCGAAAGTTGAACGTTTTATATCATGTTGCTCCCGAAAACTTTGCTCCGACTCACAAAGTTAGAAATTGAATTTGGAACGACTTTTCCATACGAAAAGTACTGTTATTTGAAGCACTCGCTCATACTTTTGGTTTACAAAAATGCTGAAAATGAAATTAGAAGTATCAATAAGATTTGAAAGAGATGATATATGAAATCTAGCCATTTGAATTTTCAAAACATGAGTACGAGTTAAAGATGTTGTAAACCATATAGGTGAAATATATGATTATCTCAAAATTTTGATGCATTACAGTTCTAATCATTAGGAGAAGAACAGTTTGGAGAACATTGGAAACACATCTCCAACAAAGGCTACCCAAAGAACTACCTTCAGAATCAAAAAGCAAGTATATATTGCTTAAAGTTTGATAATGGAGAAAGTATTTCCAACTCCAAAATGTGAAAGAAGACATTTCTTCGAACAGTTTCAAACACACTTCTGATAATCTTCATCACATATATAAACCTTCAGGCACACCTTCTTTCTTCTTGTACATAACCTTCTCCTTTGCCTTTTTGAAGTCGGCATGTGTGACCTGAAGTGGAAGACAACATCAAAAGAACAGCTTAAGCCTCACTTCACTGTCATTTAATCAACTCGATGTACTAAACGACTTAGATAAACTGTTCAGCCCCCATCCATTATCTCTAGCAATATAGACCCGAAATTTCATGAAGTTTGATAGTCTAAAAACTTGAAAATTATTCATCAAAGTCTAAAGATGTGAATTTTTAAAACCAACACCACCACAGATTCTTTGAAACTAAGTTAATCAATCATTAGAGGTGGAAAAGTTGTATCCCATCATAGTTCTTAGAAAACTGAGGCAACTATTACCTTCATGCGCCTTTCCCTCAGAGCAAGCAACCCAGCTTCAGTACATATGGCCTTTATATCAGCACCAGAGAATTCATCTTTGGTCATCACAAATTCCTCTAAGTTGACATCATCTGCCAATGTCATTCTTGATGTGTGAATCTGCAAGTCAG

Coding sequence (CDS)

ATGGGTCCTCGGCAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTTTGCCTTGCACCTTACTGCTCTCTGGTTTGTTTCAAGAAACACAAAGAAGTTCCTTGTGTTAAGCCTGTGTCTGCAGGGGACCAATCAACTGCTCCTAATGGATCACTTGTAGATAGGCCAATATGTGTCGAAGACCAAAGTGAAGTACTTGAAAAGTCGCAGCTGGAGGCCATCGCTTCTTCCTCAGAAATACGCAATACTTTGAATGATGAAAGCCTTCAGAAGCTCATCTGTGCCATTGGTAGTTCACCGGATCCAGAAACCGAACTTGATAGAGCTATGGAAGACGAAGCATTTCGCATATTCAGCAGCAAGATATCATCGATCATTGGCTCCTAG

Protein sequence

MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFRIFSSKISSIIGS

Homology

[Close]

BLAST of MC06g1768 vs. ExPASy Swiss-Prot
Match: Q15649 (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZNHIT3 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07
Identity = 38/139 (27.34%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV--PCVKPVSAGDQSTAP----------- 65
           C +C E P KY+CP C  PYCS+VCF+KHKE   P  +PV    +S  P           
Sbjct: 11  CVICLEKP-KYRCPACRVPYCSVVCFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKD 70

Query: 66  -NGSLVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELD 125
            + S+ D  +  +++ + +    L+ +  S+ +R+ L +  L++L+  +    D    + 
Sbjct: 71  DDDSIADF-LNSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMR 130

Query: 126 RAMEDEAFRIFSSKISSII 131
             M++  F  F+     I+
Sbjct: 131 AYMQEPLFVEFADCCLGIV 147

[Close]

BLAST of MC06g1768 vs. ExPASy Swiss-Prot
Match: Q6UIM1 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta OX=9544 GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06
Identity = 37/139 (26.62%), Postives = 66/139 (47.48%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV--PCVKPVSAGDQSTAP----------- 65
           C +C E P KY+CP C  PYCS+ CF+KHKE   P  +PV    +S  P           
Sbjct: 3   CVICLEKP-KYRCPACRVPYCSVACFRKHKEQCNPEARPVEKKIRSALPTKTXKPVENKD 62

Query: 66  -NGSLVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELD 125
            + S+ D  +  +++ + +    L+ +  S+ +R+ L +  L++L+  +    D    + 
Sbjct: 63  DDDSIADF-LNSDEEEDRVSLQNLKNLGKSATLRSLLLNPHLRQLMVNLDQGEDKAKLMR 122

Query: 126 RAMEDEAFRIFSSKISSII 131
             M++  F  F+     I+
Sbjct: 123 AYMQEPLFVEFADCCLGIV 139

[Close]

BLAST of MC06g1768 vs. ExPASy Swiss-Prot
Match: Q9CQK1 (Zinc finger HIT domain-containing protein 3 OS=Mus musculus OX=10090 GN=Znhit3 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV------PCVK----PVSAGDQSTAPNGS 65
           C VC E P KY+CP C  PYCS+ CF+KHKE       P  K    P    ++S   + S
Sbjct: 11  CVVCLEKP-KYRCPTCRVPYCSVPCFQKHKEQCSSEARPVEKRRAGPPVRSEESKDDDSS 70

Query: 66  LVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAME 125
           + D  +  +++ + +    L+ +  S  +R+ L +  L++L+ ++    +    +   M+
Sbjct: 71  VADF-LNSDEEEDRVSLQNLKNLGESETLRSLLLNPHLRQLMISLDQGDNKAKLMRACMQ 130

Query: 126 DEAFRIFSSKISSII 131
           +  F  F+     I+
Sbjct: 131 EPLFVEFADCCLGIV 143

[Close]

BLAST of MC06g1768 vs. ExPASy Swiss-Prot
Match: Q2KIH1 (Zinc finger HIT domain-containing protein 3 OS=Bos taurus OX=9913 GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 22/37 (59.46%), Postives = 24/37 (64.86%), Query Frame = 0


Query: 2  GPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVP 39
          G   C VC E P KY+CP C  PYCSL CF+KHK  P
Sbjct: 7  GTAVCVVCLEKP-KYRCPACRVPYCSLPCFRKHKAPP 42

[Close]

BLAST of MC06g1768 vs. ExPASy Swiss-Prot
Match: Q6UIM2 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes OX=9598 GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 33/130 (25.38%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 15  KYKCPLCLAPYCSLVCFKKHKEV--PCVKPVSAGDQSTAP------------NGSLVDRP 74
           KY+CP C  PYCS+ CF+KHKE   P  +PV    +S  P            + S+ D  
Sbjct: 5   KYRCPACRVPYCSVACFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKDDDDSIADF- 64

Query: 75  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 131
           +  +++ + +    L+ +  S+ +R+ L +  L++L+  +    D    +   M++  F 
Sbjct: 65  LNSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFV 124

[Close]

BLAST of MC06g1768 vs. NCBI nr
Match: XP_022157884.1 (zinc finger HIT domain-containing protein 3 isoform X1 [Momordica charantia])

HSP 1 Score: 266 bits (680), Expect = 8.83e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR
Sbjct: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           IFSSKISSIIGS
Sbjct: 121 IFSSKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. NCBI nr
Match: XP_022995777.1 (zinc finger HIT domain-containing protein 3 [Cucurbita maxima] >XP_022995779.1 zinc finger HIT domain-containing protein 3 [Cucurbita maxima])

HSP 1 Score: 233 bits (595), Expect = 8.13e-77
Identity = 116/132 (87.88%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSEIRNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I SSKISSIIGS
Sbjct: 121 ILSSKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. NCBI nr
Match: XP_023533050.1 (zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023533051.1 zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023533053.1 zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (594), Expect = 1.16e-76
Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSE+RNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKAQLEAIASSSEVRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I SSKISSIIGS
Sbjct: 121 ILSSKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. NCBI nr
Match: KAG7036274.1 (Zinc finger HIT domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232 bits (591), Expect = 3.31e-76
Identity = 115/132 (87.12%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSEIRNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKAQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I S KISSIIGS
Sbjct: 121 ILSGKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. NCBI nr
Match: XP_022931150.1 (zinc finger HIT domain-containing protein 3 [Cucurbita moschata] >XP_022931151.1 zinc finger HIT domain-containing protein 3 [Cucurbita moschata])

HSP 1 Score: 231 bits (588), Expect = 9.50e-76
Identity = 114/132 (86.36%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSEIRNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKAQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I S KISSI+GS
Sbjct: 121 ILSGKISSIMGS 132

[Close]

BLAST of MC06g1768 vs. ExPASy TrEMBL
Match: A0A6J1DXU2 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024491 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 4.28e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR
Sbjct: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           IFSSKISSIIGS
Sbjct: 121 IFSSKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. ExPASy TrEMBL
Match: A0A6J1JZX2 (zinc finger HIT domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491210 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 3.94e-77
Identity = 116/132 (87.88%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSEIRNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I SSKISSIIGS
Sbjct: 121 ILSSKISSIIGS 132

[Close]

BLAST of MC06g1768 vs. ExPASy TrEMBL
Match: A0A6J1ESW0 (zinc finger HIT domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111437419 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 4.60e-76
Identity = 114/132 (86.36%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSLVDRP 60
           MGPRQCQVCNEAPSKYKCPLCL PYCSLVCFKKHKEVPCVKPVSA DQS APNGS VDRP
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCVKPVSAEDQSIAPNGSPVDRP 60

Query: 61  ICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAFR 120
           + V DQ+EVLEK+QLEAIASSSEIRNTLNDE L+ LICAI SSPDPE ELD+AMEDEAFR
Sbjct: 61  VFVGDQNEVLEKAQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAFR 120

Query: 121 IFSSKISSIIGS 132
           I S KISSI+GS
Sbjct: 121 ILSGKISSIMGS 132

[Close]

BLAST of MC06g1768 vs. ExPASy TrEMBL
Match: A0A0A0KDK5 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403610 PE=4 SV=1)

HSP 1 Score: 226 bits (577), Expect = 2.26e-74
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC-VKPVSAGDQSTAPNGSLVDR 60
           M PR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC +KPVS GDQSTA NG+ VDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAF 120
           PICV DQ+EVLEKSQLEAIASSSEI N LNDE LQK I AI SSPDPETE+D+AMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RIFSSKISSIIGS 132
           RIFSSKISSII S
Sbjct: 121 RIFSSKISSIINS 133

[Close]

BLAST of MC06g1768 vs. ExPASy TrEMBL
Match: A0A1S3CM88 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502587 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 1.31e-73
Identity = 114/133 (85.71%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC-VKPVSAGDQSTAPNGSLVDR 60
           M PR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC +KPVS  DQSTAPNGS VDR
Sbjct: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEEDQSTAPNGSFVDR 60

Query: 61  PICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAF 120
           PICV DQ+EVLEKSQLEAIASSSEI N LNDE L+K I AI SS DPETELD+AMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120

Query: 121 RIFSSKISSIIGS 132
           RIFSSKISSII S
Sbjct: 121 RIFSSKISSIISS 133

[Close]

BLAST of MC06g1768 vs. TAIR 10
Match: AT4G28820.1 (HIT-type Zinc finger family protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28
Identity = 73/158 (46.20%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGS---------- 65
           C++C +  SKYKCP CL PYCSL CFK HKE PC KP         P  S          
Sbjct: 9   CEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCAKPSDPSSTEEKPAASPAKEVPVKRP 68

Query: 66  -----------------------LVDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDES 125
                                   V RPI VE++  +LEK+Q EAIASSSEIR  L DE 
Sbjct: 69  EEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALKDEP 128

Query: 126 LQKLICAIGSSPDPETELDRAMEDEAFRIFSSKISSII 131
           LQKLI +I SS +P  ELD AM  EAFR F+ KI S I
Sbjct: 129 LQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSNI 166

[Close]

BLAST of MC06g1768 vs. TAIR 10
Match: AT4G28820.2 (HIT-type Zinc finger family protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.4e-28
Identity = 72/157 (45.86%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCVKPVSAGDQSTAPNGSL--------- 65
           C++C +  SKYKCP CL PYCSL CFK HKE PC KP         P             
Sbjct: 9   CEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCAKPSDPSSTEEKPASPAKEVPVKRPE 68

Query: 66  -----------------------VDRPICVEDQSEVLEKSQLEAIASSSEIRNTLNDESL 125
                                  V RPI VE++  +LEK+Q EAIASSSEIR  L DE L
Sbjct: 69  EANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALKDEPL 128

Query: 126 QKLICAIGSSPDPETELDRAMEDEAFRIFSSKISSII 131
           QKLI +I SS +P  ELD AM  EAFR F+ KI S I
Sbjct: 129 QKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSNI 165

The following BLAST results are available for this feature:

BLAST of MC06g1768 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q15649	7.1e-07	27.34	Zinc finger HIT domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZNHIT3 PE...	[more]
Q6UIM1	2.1e-06	26.62	Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta OX=9544...	[more]
Q9CQK1	7.9e-06	26.67	Zinc finger HIT domain-containing protein 3 OS=Mus musculus OX=10090 GN=Znhit3 P...	[more]
Q2KIH1	1.3e-05	59.46	Zinc finger HIT domain-containing protein 3 OS=Bos taurus OX=9913 GN=ZNHIT3 PE=2...	[more]
Q6UIM2	1.1e-04	25.38	Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes OX=959...	[more]

BLAST of MC06g1768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157884.1	8.83e-90	100.00	zinc finger HIT domain-containing protein 3 isoform X1 [Momordica charantia]	[more]
XP_022995777.1	8.13e-77	87.88	zinc finger HIT domain-containing protein 3 [Cucurbita maxima] >XP_022995779.1 z...	[more]
XP_023533050.1	1.16e-76	87.12	zinc finger HIT domain-containing protein 3 [Cucurbita pepo subsp. pepo] >XP_023...	[more]
KAG7036274.1	3.31e-76	87.12	Zinc finger HIT domain-containing protein 3 [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022931150.1	9.50e-76	86.36	zinc finger HIT domain-containing protein 3 [Cucurbita moschata] >XP_022931151.1...	[more]

BLAST of MC06g1768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXU2	4.28e-90	100.00	zinc finger HIT domain-containing protein 3 isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1JZX2	3.94e-77	87.88	zinc finger HIT domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1ESW0	4.60e-76	86.36	zinc finger HIT domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0KDK5	2.26e-74	85.71	HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403610 PE...	[more]
A0A1S3CM88	1.31e-73	85.71	zinc finger HIT domain-containing protein 3 isoform X1 OS=Cucumis melo OX=3656 G...	[more]

BLAST of MC06g1768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28820.1	2.6e-28	46.20	HIT-type Zinc finger family protein	[more]
AT4G28820.2	4.4e-28	45.86	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.60.190		coord: 2..49 e-value: 7.0E-13 score: 50.1
None	No IPR available	PANTHER	PTHR13483	UNCHARACTERIZED	coord: 5..130
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 4..37
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 5..32 e-value: 3.0E-10 score: 39.8
IPR007529	Zinc finger, HIT-type	PROSITE	PS51083	ZF_HIT	coord: 6..39 score: 11.087504
IPR040197	Zinc finger HIT domain-containing protein 3	PANTHER	PTHR13483:SF11	ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 3	coord: 5..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1768.1	MC06g1768.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0048254	snoRNA localization
cellular_component	GO:0005634	nucleus
cellular_component	GO:0070761	pre-snoRNP complex
molecular_function	GO:0046872	metal ion binding