MC06g1736 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1736
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Seed nucellus-specific protein
Location	MC06: 24719930 .. 24720277 (+)
RNA-Seq Expression	MC06g1736
Synteny	MC06g1736

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGTAAGGCTCTAGTGCCCATGCTTGCAGTGTCTGCCATGGCAATGGTGATTCTGCAGAGTGTTGAAGGAGGGAGAGACCTGGCCCTGAAGGAAGCAAAAGTTCACAATCCCCAGATTTTCAATGAAAATTTGGGCTACAAATCCAGGGAGGAATATGACTGTGACAGATACAAATACAAAGATAGAGACTGCTATGAATATGGAGGCTGCGACAAGTCCCCTTACCCTGATGATGGTGGCGATGATCAACACGGGTATAACTGGGAATCTAAGCAACAGGCTGCGCCGGAGTCCAAAGAAGTCGCGGGTCCCGGAAAGTATGGAGTCCGCCACCATTTCCCC

mRNA sequence

ATGATGAGTAAGGCTCTAGTGCCCATGCTTGCAGTGTCTGCCATGGCAATGGTGATTCTGCAGAGTGTTGAAGGAGGGAGAGACCTGGCCCTGAAGGAAGCAAAAGTTCACAATCCCCAGATTTTCAATGAAAATTTGGGCTACAAATCCAGGGAGGAATATGACTGTGACAGATACAAATACAAAGATAGAGACTGCTATGAATATGGAGGCTGCGACAAGTCCCCTTACCCTGATGATGGTGGCGATGATCAACACGGGTATAACTGGGAATCTAAGCAACAGGCTGCGCCGGAGTCCAAAGAAGTCGCGGGTCCCGGAAAGTATGGAGTCCGCCACCATTTCCCC

Coding sequence (CDS)

ATGATGAGTAAGGCTCTAGTGCCCATGCTTGCAGTGTCTGCCATGGCAATGGTGATTCTGCAGAGTGTTGAAGGAGGGAGAGACCTGGCCCTGAAGGAAGCAAAAGTTCACAATCCCCAGATTTTCAATGAAAATTTGGGCTACAAATCCAGGGAGGAATATGACTGTGACAGATACAAATACAAAGATAGAGACTGCTATGAATATGGAGGCTGCGACAAGTCCCCTTACCCTGATGATGGTGGCGATGATCAACACGGGTATAACTGGGAATCTAAGCAACAGGCTGCGCCGGAGTCCAAAGAAGTCGCGGGTCCCGGAAAGTATGGAGTCCGCCACCATTTCCCC

Protein sequence

MMSKALVPMLAVSAMAMVILQSVEGGRDLALKEAKVHNPQIFNENLGYKSREEYDCDRYKYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYGVRHHFP

Homology

[Close]

BLAST of MC06g1736 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 112 bits (279), Expect = 3.44e-29
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 4   KALVPMLAVSAMAMVILQSVEGGRDLALKEAKVHN-PQIFNENL-GYKSREEYDCDRYKY 63
           K LV ML +SA+AM +L++VEGGR++ LKEA  +  P + NE   GYK +E+Y+CD YKY
Sbjct: 6   KVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYECDGYKY 65

Query: 64  KDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYGVRHHFP 116
           KD++CYEYG CDKSPY ++  +D   YN    ++  P+ KE+A   KYGV H+FP
Sbjct: 66  KDKNCYEYGNCDKSPYNEE--EDDRQYNGSPYKKPIPKPKEMAR--KYGVHHNFP 116

[Close]

BLAST of MC06g1736 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])

HSP 1 Score: 106 bits (265), Expect = 4.73e-27
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 4   KALVPMLAVSAMAMVILQSVEGGRDLALKEA-KVHNPQIFNENLGYKSRE-EYDCDRYKY 63
           K LV +LA S +AM+ +++VEG R + LKEA K +N Q+ NE + Y   E EYDCD YKY
Sbjct: 6   KNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDCDGYKY 65

Query: 64  KDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYGVRHHFP 116
           KD+DCY+YG CDKSPY D   DD   YNW S +   P+ KEV    KY V  +FP
Sbjct: 66  KDKDCYDYGNCDKSPY-DHSDDDDGQYNWNSYKNPVPKPKEVDE--KYKVHKNFP 117

[Close]

BLAST of MC06g1736 vs. NCBI nr
Match: TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (263), Expect = 8.48e-27
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 1   MMSKALVPMLAVSAMAMVILQSVEGGRDLALKEA-KVHNPQIFNENLGYKSREEYDCDRY 60
           M+ K LV +LA+S + M+ +++VEGGR++ LKEA K +N  + NEN+ YK +EE  CD Y
Sbjct: 3   MIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEEDGCDGY 62

Query: 61  KYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEV 103
           KYKD+DCYEYG C KSPYPD    D   YNW S  +  P+ KE+
Sbjct: 63  KYKDKDCYEYGNCGKSPYPDY---DDGQYNWNSHMKPVPKPKEM 103

[Close]

BLAST of MC06g1736 vs. NCBI nr
Match: KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 2.12e-24
Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 3   SKALVPMLAVSAMAMVILQSVEGGRDLALKE--AKVHNPQIFNENL----------GYKS 62
           SK L+ +L VSA+AM +L++VEGGR++A K+  AK + PQ  ++N           GYK 
Sbjct: 4   SKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTY-PQELDDNYEGYKPKEDYEGYKP 63

Query: 63  REEYDCDRYKYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYG 116
           +E+Y+CD YKYKD+DCYEYG CDKSPY +D     H YNW   ++   + KE+    KYG
Sbjct: 64  KEDYECDGYKYKDKDCYEYGNCDKSPYNEDV---DHQYNWGPYKKPITKPKEMGE--KYG 123

[Close]

BLAST of MC06g1736 vs. NCBI nr
Match: KAG6606309.1 (hypothetical protein SDJN03_03626, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.0 bits (245), Expect = 7.54e-24
Identity = 69/144 (47.92%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 1   MMSKALVPMLAVSAMAMVI--LQSVEGGRDLALKEAKVHNPQIFNENLGYKSREEYDCDR 60
           M+SKALV +LAVSAMAM +  LQS EG        AK  NPQ+F ENLGYKS+ +Y CD 
Sbjct: 1   MISKALVILLAVSAMAMAMTALQSAEG--------AKTQNPQVFKENLGYKSKGDYGCDG 60

Query: 61  YKYKDRDCY-------------------------EYGGCDKSPYPDDGGDDQHGYNWES- 116
           YKYKDRDCY                         EYG CDK+PY + G    H Y+  S 
Sbjct: 61  YKYKDRDCYKYGYCDKSNEDCDCDEYKYKDGDCDEYGNCDKAPYYEAG---DHPYDGNSY 120

[Close]

BLAST of MC06g1736 vs. ExPASy TrEMBL
Match: O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 1.67e-29
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 4   KALVPMLAVSAMAMVILQSVEGGRDLALKEAKVHN-PQIFNENL-GYKSREEYDCDRYKY 63
           K LV ML +SA+AM +L++VEGGR++ LKEA  +  P + NE   GYK +E+Y+CD YKY
Sbjct: 6   KVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYECDGYKY 65

Query: 64  KDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYGVRHHFP 116
           KD++CYEYG CDKSPY ++  +D   YN    ++  P+ KE+A   KYGV H+FP
Sbjct: 66  KDKNCYEYGNCDKSPYNEE--EDDRQYNGSPYKKPIPKPKEMAR--KYGVHHNFP 116

[Close]

BLAST of MC06g1736 vs. ExPASy TrEMBL
Match: A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 2.29e-27
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 4   KALVPMLAVSAMAMVILQSVEGGRDLALKEA-KVHNPQIFNENLGYKSRE-EYDCDRYKY 63
           K LV +LA S +AM+ +++VEG R + LKEA K +N Q+ NE + Y   E EYDCD YKY
Sbjct: 6   KNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDCDGYKY 65

Query: 64  KDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYGVRHHFP 116
           KD+DCY+YG CDKSPY D   DD   YNW S +   P+ KEV    KY V  +FP
Sbjct: 66  KDKDCYDYGNCDKSPY-DHSDDDDGQYNWNSYKNPVPKPKEVDE--KYKVHKNFP 117

[Close]

BLAST of MC06g1736 vs. ExPASy TrEMBL
Match: A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 4.10e-27
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 1   MMSKALVPMLAVSAMAMVILQSVEGGRDLALKEA-KVHNPQIFNENLGYKSREEYDCDRY 60
           M+ K LV +LA+S + M+ +++VEGGR++ LKEA K +N  + NEN+ YK +EE  CD Y
Sbjct: 3   MIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEEDGCDGY 62

Query: 61  KYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEV 103
           KYKD+DCYEYG C KSPYPD    D   YNW S  +  P+ KE+
Sbjct: 63  KYKDKDCYEYGNCGKSPYPDY---DDGQYNWNSHMKPVPKPKEM 103

[Close]

BLAST of MC06g1736 vs. ExPASy TrEMBL
Match: A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 1.03e-24
Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 3   SKALVPMLAVSAMAMVILQSVEGGRDLALKE--AKVHNPQIFNENL----------GYKS 62
           SK L+ +L VSA+AM +L++VEGGR++A K+  AK + PQ  ++N           GYK 
Sbjct: 4   SKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTY-PQELDDNYEGYKPKEDYEGYKP 63

Query: 63  REEYDCDRYKYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESKEVAGPGKYG 116
           +E+Y+CD YKYKD+DCYEYG CDKSPY +D     H YNW   ++   + KE+    KYG
Sbjct: 64  KEDYECDGYKYKDKDCYEYGNCDKSPYNEDV---DHQYNWGPYKKPITKPKEMGE--KYG 123

[Close]

BLAST of MC06g1736 vs. ExPASy TrEMBL
Match: A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.53e-24
Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 3   SKALVPMLAVSAMAMVILQSVEGGRDLALKE--AKVHNPQIFNENL-------------- 62
           SK LV +L VSAMAM  L++VEGGR++ALK+  AK ++ ++ +EN               
Sbjct: 4   SKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQEL-DENYEGYKPKEDYEGYKP 63

Query: 63  -----GYKSREEYDCDRYKYKDRDCYEYGGCDKSPYPDDGGDDQHGYNWESKQQAAPESK 116
                GYK +E+Y+CD YKY D+DCYEYG CDKSPY +D     H YNW   ++   + K
Sbjct: 64  KEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNED---IDHQYNWGPNKKPIAKPK 123

The following BLAST results are available for this feature:

BLAST of MC06g1736 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1736 vs. NCBI nr


Match Name	E-value	Identity	Description
AAB82329.1	3.44e-29	51.30	seed nucellus-specific protein [Citrullus lanatus]	[more]
KGN46573.1	4.73e-27	52.17	hypothetical protein Csa_005092 [Cucumis sativus]	[more]
TYK14008.1	8.48e-27	51.92	Seed nucellus-specific protein [Cucumis melo var. makuwa]	[more]
KAA0068070.1	2.12e-24	46.03	Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel...	[more]
KAG6606309.1	7.54e-24	47.92	hypothetical protein SDJN03_03626, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC06g1736 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
O22351	1.67e-29	51.30	Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1	[more]
A0A0A0KAR7	2.29e-27	52.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1	[more]
A0A5D3CS37	4.10e-27	51.92	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VLH5	1.03e-24	46.03	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L8T2	7.53e-24	43.70	Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S...	[more]

BLAST of MC06g1736 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1736.1	MC06g1736.1	mRNA