MC06g1580 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1580
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA excision repair protein ERCC-1
Location	MC06: 23054399 .. 23060289 (-)
RNA-Seq Expression	MC06g1580
Synteny	MC06g1580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGTTTCGTACCTAAAAGAAATAGGCCATTCCTTCGATTTCCACAACCGAAATACGCAAGAAAACAGAACGAAGCAGGAGCCCGTTTGAACGTCCCAAATTCCTTCGAGAATCTGAAAATGGAGCAGCGGGAGGAGGAAGACAACTTACAGCAGACTGTCCACAAAAAGAGCAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCCTCGAAATCTCACAACCGAAACCCCAATCCTTCTCCCAAGCCTTTTCTTTCCTCAAATCCTCTGAATTCTACTCTCCTCCTCCAAACCCAGCCTCTGCCTCCTCTTCCCAGCCCCTTCCGCCTTCTCAAATCACGAACCCAAGGTCCATTTTTGTTCTTTTTCCCGCGCTTTCCTTCATTTTGGATTTTGTCTTCTGGGTTTACTTGGATTTCAATATGGTTTTTGTGGGTCGTTGTTGATTTCAGGAAAAATGATCAATTAGAGACTTCATCTTCTTCGACTTCAGCTTCAGCTTCTGCAGCTGCTCCAACTAATAGCTTGTCCGGGTCGAGCTCCGCTACTCGCAATGCCATTCTTGTGAGCAATAGACAGGTGAGATCATCTTAATTTGAACTGGCACGCTGTGTTTTCCATATGTCGTTGTCAATATTTTGGAGTGTACAGTTAGGATCACGGCTTCCACCGGCTGTGTTGTAGCTTATCTCAGTGTGGTACATGAATCAGTTATAATTATTAGGCAGATTGAAAAAGAGACACGAATCTTAGCTCATAACTGATTAATATGAAGTTTAGAAAATGGTAATTTTAAAATATTTTGAAGTTATTCTGCGAGAATTGATTCTTATTATGAATGCTAACGATGGAAGGGTGGAGAGACGTGGTTGTTAGGGGGAGATTCATCTGACGCATTTGCTATTTGTTGATAATAAAATTCTTTTACATTAGTAGTGATTAATGTCTTTTGGTAATGTTAATGGAAGGGAAGGCTAATGGTCTTCAAGGGATTTCTAGGCTCAGCATTAACAGATTGAAATCCTCAGGTTTAGGGGTCAATTGTGATGTACATAAATTGGAAACGTGGGTTCAATTGGTTGGTTGTAAAGTCTCCAAGTCCTCCCTTATTATTTTGGTTTCCCTTGTGCATTTTTATCAATAGGAAAGGAATAAGAGGATCTTCCATTGTAGGAATGTCTTCCGAGGAGGTCCAAAGCATTAATGCTTCATGCCTCACTCTAGACTTCTATGTTCTCTTTTTGTTTTGGGAAATTACAGTTAGCTTTGTTCTTATGTTGTTGCTTTTCTTTTTGTTGCTCTTGGGTGGCTTTGACCTGTCTTTTTTATGTTACCTCATGCTCGGTCTTCCACTATTCTTAGTAAAAGTGGCTTCTTAAAAAGAAAAATAAAGAAAGAAAAAGAAATATTGAATATTAGCCTTTTGGGCTTATTGCTTCATGTTTACTTTATTTGAAATTTATGGCAGTGTGAAGTTGTTAGTAGTAGTGAATGGTTTTTCTCATGTTTCTCTCAGAGGGGAAATCCCCTTCTCAAACATATCAGGAACGTGAGATGGACTTTTGCGGATATTGTGCCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGGTTCAAGTTTCATTCCCTTTCTATTTTTTATACTCATGGTATCTAAAAATAAATAAATGAATAAAATTCTCTCTAGATTTAATGTGTCCAGTGTGCATCTAAGCATGTTCTTTTCTGACATGTATGCACCCCTGGCACTCACAAACTAGAGTGTCTATGCTTATTATTTGCATTTGCTCTCATAAGAATTTATAGGATATAAAATGTGCACCATGAACAGCAGGATGTTGAGGTCTGGAATTCGAAGTGAAATTTTTTATTTGCCTGTTTTCATAACAATGCCTTCTGATTTGTAGTTTCTATTCAGTGTCATGTGTTGGAAGGCTTTTAGATAGCAACTAGTTCTTTAAGGTTAATATGTAATCAAATGTGGTTCTATTTGCGCATATAAGAGTTGTATTATGACAAAAAGTGTTTTCTTTTAGCATTTTAACCTCAGTACTGGGTTTGAACTCTCACAACATCTTATCCAAGCAAAACATTGTGCTAAGAAACACAAACACGGATTCATCTGGACACGTGTCTGACGTGCCAGAAAATGTGTCCAATACTTTTTTATTTATTTTTTTTCCAATTTCGAACATGCCTGGACACACCTTAGACACGCATATGAAAAAAAATAGAACATGCATCAAGAGAGATAAAACCCAGCCCATTAAGCCCAACCTAAAACATAAGAAAAAAAAACCCAGGAACCCTTGAAATAAAAGACCATAAAAACCCAGGAACCCTTGTGAGAAAAGATATGTTGCCAACTGCTAGTGCCTGCCCACTTCGCTGCCAGCTGCTGCAACTGCAAGGTTCCAATTGTTTTTTCTTAACTTCGTAAAAAACAGATGTTGTAGAACACGTATTGATTATTAACAAATCCTATATGTTGATCATATATAAACGATTAGGATAACATCTTCATCTTCCTCTAGCCAATCAAATCCTTCTATATTTTCAAGCTCTTCTATTGTTGAATATGAATAAAAAAATATATCAATATATATATGCATATATTCTTTAAAAAAAATAATGTGTCCCACATGTGTCCATGTCCATGTCCATACATTTTCAAAAATTTATGTGTCACCGACCACCGTGTAGCGTGTCCATGTCATGTCATATTTTTGCCCCGTGTTCATGCTTCTTAGACATTGTGCATCAATCGTTTAAATCATTCTTCTTTCTGCATGTTAGAATATTCCATTGATTAGATCAATCCTCTTTTGCAGTCTCCGGTATCATCTACTGCATCCTGATTACCTGTATTACCGTATAAGAGAATTGCAAAAAAATTTCAAGCTTTGTGTTGTCCTTTGTCATGTTGATGTGGTAAGAAACCATACTAACTAGCTGGCCCTTTTGGTACCCTTTTCTCCCGTTTTCCTGATTAAAACATTAATGTATTGAAATCTTAGTTGTTTTGGTGCTTGTAAGAAGTAATGGCATGTATAGTGTGATTTCAGGAGGATGTTGTCAAACCGTTACTTGAAGTCACTAAAACAGCTCTACTTCACGATTGTACCCTTCTATGTGCTTGGAGGTACATTTTTTATGTTTCTTTGAAGTGGATTTTGGCTAGCTTCTTTGGTATTTCTGTCATCAATGACTTTTGACTGTTCCTGCTATCAACCTACTTGTGAAATAAATATATTTTTAGGACTAATTGTGGTACATATTTCGTTGTCAAGCATTTTAATGGTTTCCGTTGATAATTTTGTCTGTGATAGGAAATGGACTTTTTTTTGTTGATAGAACTTCAATAACTATTAAATTGAAAAGTGGAATTAAAGATTGGAATGGGAACGTTTTGAGTAACCTGTTTGTGCCTTTGTGGGTATCTAATAGTTAAAGAGTAGACAACTTGATGCCCGGAAATTTGACTTTTAGATTTGCTCAAGAGTTTCCATTTCTGCTTTTTATTAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACAATAAAAGTTTATGAAAACAAGTCCGCAGATATTATTCAAGGCCAGATGGACACTGACTATCTCTCACGGGTATTGATTTTCTTGAGGCTTTCTGCCTATTAAACATTTATTTCTGTGATATCAGTATCGTGTGGTCTTTTCCTATTTAAAATACTGATTATTTTTTCAAAATTCAAATCCATGACAATTTATTTTCCTTTCTTAGCCTATAAGTCTATTCTAAATTAAAATTCTCATTTCAATTGTAGCTAACTCATGTCTTAACATCAGTTCGGCATGTTAACAAGACTGATGTTGTCACCCTTGGAACGACATTCGGGGTAAACCTCTGCTGTATTTTGACTAAGATTCTTAAATTATTTTAATGTTGTCTTGAGTTGGTGCCAAACTGCTAATTCATTTTCTGTTGTAGTCCCTGTCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGCATAGGTGAGCGCAAGGTAGTCCTCCATTTTTGGAAACGTGACCCTCCTCTCTACATGTTTCCTTAGTTCGTGTTATTTGTATTCCTGTTTGTTGGCTTTTCTATGTTTATTTTGACAATATCCAATATGTACATGATGTCATACATACTGGTAAATTTTGAATTTATTTTAGCGAGAAGGATTACTCTCTTTGTCATCAAAACATGTTTATAATGGTTAAATTAACAGTTTAGTCCTTGAACTTTTAGAGTTGTGTTGTGCTAATAGATCCCTTAAAATGTGTTTAATAGGTTCTTAGACTTTTAATTTTATGTCTAATAGATCCTTAAATTTTTAATTTTGTGTCTAAGAGGGCTATGAATTAGAAAAAATTTCAAACAGATCAGAGACCTACTAAAACAAAATTGAAAGTTCAAGGACTTATTTGAAACTTTTAAAGTTTAAGGACCTATTGACATAAAAGTGAAAGTTTAGAGACGTACTAGATTTTTTCAACCATCATGGGATGGCTTAAGTAGTCAATGAGGGCCAATGTAAATAGCAAAGGAGTTAGAGGGAATGAGTTCAAACCATGGTGGCCACCTACCTAAGATTTAATATCCTACGAGTTACCTTGTCAACCAAATGTAGTAGGGTCAGGCGGTTGACCCGTGACTAGTCGAGGTGCGCACAAACTAGCCCGGACACACGGATTTCAAAAAAAAATAGATATTTTCTAAAATTTATGGATTAAGCTTGAAATTTAACCTTTATAATATTACAAGTAATTATAGAAACATTTATAATTATTGAGTAATGATATGTTTGAAGAAATGTTAATGAAGATGAGTCTCACATTTTGACATATTATGTTAATAATAAGTATTTAACTGTGATATAACTTGCTTGATTTAATAGTTGTCCCGTATTTTTCACTCATAATGGCATTTTCCTCGATATCCGGTCTATGATCTTGTAAATTTAGATTGCCGATAATTCTAATGATACTGGCAGTTTTCATACTCCACACCAATCTCATTTTTTGATCGGGTGGATGAGCTTATAGCATCTAGAGAATTAGAGTGATGTTTCATTTGCGTGCATGAATGCTGTTGTGAATTTCTCTTACTCATCAGGTAAGGCGGCTGTACGACACTTTCCATGAGCCTTTCAAGCGTGTTGTTTCGACTCACCCTGATGTTCCAGAAACCCCTGCCGAGAAGAATACCGAACCACTCTCAACGGGCGAAGATGTGGATGGGAAGAAAACAGAAGATGCTGGCAAACTCAAGAAAGAACCCGACTTAACCATCAAATCAGCTTTGTCTGCTGCTTTTGCCAAATATGGTAATAAAATTGGTAAAAGTAATAGCAGGTCACAAGGAGAGGAAAAAGAAGAAACAAGTGTGCCCTTGAATTCAGAACCTGAAAGTAGCAACTTACAGTAACGTCATCCTAAACTCACAAGCTTTTGACCATCCAAATCCATGAAGACCAATAGCATAAATATGTCTGAAGTCTTACTGTTGTTCCTGATGCTGCTTGATCACTTCCTACATGTCCACATGTCCTTCAGCAACACAAATGAAATCGAAATGAACTCGTGTTTTGTTTTTAGGTGTGAGCAAGCTTGGCCGAATACTTACAGATATTAAAAAAAAAAAGTGACTCTGCTGTTAGTTGAAATGAAAGATAGGAAGTAATTAAGTTTTGGGTACTAGGTGACTCTAGAGTAGTTTGAAATCTACATGTAAATTATGTTTGCCTTTCTTCTTTCTTCTTTGTTTGTAGCTGTAATTTTTCTTGGACAAGTGAAAACTAAGATCATCTTTTTCCTCAATAAACGTCTTCTTTTTAGACACATATAAGGTCTCCATC

mRNA sequence

GTCGTTTCGTACCTAAAAGAAATAGGCCATTCCTTCGATTTCCACAACCGAAATACGCAAGAAAACAGAACGAAGCAGGAGCCCGTTTGAACGTCCCAAATTCCTTCGAGAATCTGAAAATGGAGCAGCGGGAGGAGGAAGACAACTTACAGCAGACTGTCCACAAAAAGAGCAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCCTCGAAATCTCACAACCGAAACCCCAATCCTTCTCCCAAGCCTTTTCTTTCCTCAAATCCTCTGAATTCTACTCTCCTCCTCCAAACCCAGCCTCTGCCTCCTCTTCCCAGCCCCTTCCGCCTTCTCAAATCACGAACCCAAGGAAAAATGATCAATTAGAGACTTCATCTTCTTCGACTTCAGCTTCAGCTTCTGCAGCTGCTCCAACTAATAGCTTGTCCGGGTCGAGCTCCGCTACTCGCAATGCCATTCTTGTGAGCAATAGACAGAGGGGAAATCCCCTTCTCAAACATATCAGGAACGTGAGATGGACTTTTGCGGATATTGTGCCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTCCGGTATCATCTACTGCATCCTGATTACCTGTATTACCGTATAAGAGAATTGCAAAAAAATTTCAAGCTTTGTGTTGTCCTTTGTCATGTTGATGTGGAGGATGTTGTCAAACCGTTACTTGAAGTCACTAAAACAGCTCTACTTCACGATTGTACCCTTCTATGTGCTTGGAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACAATAAAAGTTTATGAAAACAAGTCCGCAGATATTATTCAAGGCCAGATGGACACTGACTATCTCTCACGGCTAACTCATGTCTTAACATCAGTTCGGCATGTTAACAAGACTGATGTTGTCACCCTTGGAACGACATTCGGGTCCCTGTCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGCATAGGTGAGCGCAAGGTAAGGCGGCTGTACGACACTTTCCATGAGCCTTTCAAGCGTGTTGTTTCGACTCACCCTGATGTTCCAGAAACCCCTGCCGAGAAGAATACCGAACCACTCTCAACGGGCGAAGATGTGGATGGGAAGAAAACAGAAGATGCTGGCAAACTCAAGAAAGAACCCGACTTAACCATCAAATCAGCTTTGTCTGCTGCTTTTGCCAAATATGGTAATAAAATTGGTAAAAGTAATAGCAGGTCACAAGGAGAGGAAAAAGAAGAAACAAGTGTGCCCTTGAATTCAGAACCTGAAAGTAGCAACTTACAGTAACGTCATCCTAAACTCACAAGCTTTTGACCATCCAAATCCATGAAGACCAATAGCATAAATATGTCTGAAGTCTTACTGTTGTTCCTGATGCTGCTTGATCACTTCCTACATGTCCACATGTCCTTCAGCAACACAAATGAAATCGAAATGAACTCGTGTTTTGTTTTTAGGTGTGAGCAAGCTTGGCCGAATACTTACAGATATTAAAAAAAAAAAGTGACTCTGCTGTTAGTTGAAATGAAAGATAGGAAGTAATTAAGTTTTGGGTACTAGGTGACTCTAGAGTAGTTTGAAATCTACATGTAAATTATGTTTGCCTTTCTTCTTTCTTCTTTGTTTGTAGCTGTAATTTTTCTTGGACAAGTGAAAACTAAGATCATCTTTTTCCTCAATAAACGTCTTCTTTTTAGACACATATAAGGTCTCCATC

Coding sequence (CDS)

CGTTTCGTACCTAAAAGAAATAGGCCATTCCTTCGATTTCCACAACCGAAATACGCAAGAAAACAGAACGAAGCAGGAGCCCGTTTGAACGTCCCAAATTCCTTCGAGAATCTGAAAATGGAGCAGCGGGAGGAGGAAGACAACTTACAGCAGACTGTCCACAAAAAGAGCAAGACCATTATCAAGATACCCTCTTATCAAGAAGTCCTCGAAATCTCACAACCGAAACCCCAATCCTTCTCCCAAGCCTTTTCTTTCCTCAAATCCTCTGAATTCTACTCTCCTCCTCCAAACCCAGCCTCTGCCTCCTCTTCCCAGCCCCTTCCGCCTTCTCAAATCACGAACCCAAGGAAAAATGATCAATTAGAGACTTCATCTTCTTCGACTTCAGCTTCAGCTTCTGCAGCTGCTCCAACTAATAGCTTGTCCGGGTCGAGCTCCGCTACTCGCAATGCCATTCTTGTGAGCAATAGACAGAGGGGAAATCCCCTTCTCAAACATATCAGGAACGTGAGATGGACTTTTGCGGATATTGTGCCTGATTACTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTCCGGTATCATCTACTGCATCCTGATTACCTGTATTACCGTATAAGAGAATTGCAAAAAAATTTCAAGCTTTGTGTTGTCCTTTGTCATGTTGATGTGGAGGATGTTGTCAAACCGTTACTTGAAGTCACTAAAACAGCTCTACTTCACGATTGTACCCTTCTATGTGCTTGGAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACAATAAAAGTTTATGAAAACAAGTCCGCAGATATTATTCAAGGCCAGATGGACACTGACTATCTCTCACGGCTAACTCATGTCTTAACATCAGTTCGGCATGTTAACAAGACTGATGTTGTCACCCTTGGAACGACATTCGGGTCCCTGTCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGCATAGGTGAGCGCAAGGTAAGGCGGCTGTACGACACTTTCCATGAGCCTTTCAAGCGTGTTGTTTCGACTCACCCTGATGTTCCAGAAACCCCTGCCGAGAAGAATACCGAACCACTCTCAACGGGCGAAGATGTGGATGGGAAGAAAACAGAAGATGCTGGCAAACTCAAGAAAGAACCCGACTTAACCATCAAATCAGCTTTGTCTGCTGCTTTTGCCAAATATGGTAATAAAATTGGTAAAAGTAATAGCAGGTCACAAGGAGAGGAAAAAGAAGAAACAAGTGTGCCCTTGAATTCAGAACCTGAAAGTAGCAACTTACAGTAA

Protein sequence

RFVPKRNRPFLRFPQPKYARKQNEAGARLNVPNSFENLKMEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ

Homology

[Close]

BLAST of MC06g1580 vs. ExPASy Swiss-Prot
Match: Q9MA98 (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.1e-127
Identity = 256/403 (63.52%), Postives = 309/403 (76.67%), Query Frame = 0


Query: 44  EEEDNLQQTVHKKSKT--IIKIPSYQEVLEISQPK---------PQSFSQAFSFLKSSEF 103
           E+  +L Q + +K KT  +I +PSYQEVLE SQ K          QSFSQAF+F+KSS+ 
Sbjct: 9   EKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDV 68

Query: 104 YS-PPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRN 163
           YS PPP+ A+ASSSQP   SQ+  P  + Q   +  ++S+S   A  T S+  +++  RN
Sbjct: 69  YSPPPPSSAAASSSQPSGASQV--PHSSSQTHQTDGASSSSTPVA--TGSVPSNTTQNRN 128

Query: 164 AILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRE 223
           AILVS+RQ+GNPLLKHIRNV+W F+DI+PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 129 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 188

Query: 224 LQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKS 283
           LQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENK 
Sbjct: 189 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 248

Query: 284 ADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGE 343
           AD+IQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGE
Sbjct: 249 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 308

Query: 344 RKVRRLYDTFHEPFKRVVSTHPDV-----PETPAEKNT---EPLSTGEDVDGKKTEDAGK 403
           RKV+RLYDTFHEPFKR  S++P V     PE P EK+    EP+   ED      ED+ K
Sbjct: 309 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDF----VEDSRK 368

Query: 404 LKK---EPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETS 424
            KK   EP+ T+K+ALSA FA+Y +++ K   +   +EK+ T+
Sbjct: 369 RKKKEPEPEKTVKTALSAVFARYSDRLSKKKEKQ--KEKDTTT 401

[Close]

BLAST of MC06g1580 vs. ExPASy Swiss-Prot
Match: P07992 (DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.8e-60
Identity = 135/309 (43.69%), Postives = 189/309 (61.17%), Query Frame = 0


Query: 40  MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 99
           M+  ++++ + Q     ++    IP  ++ +     KP   S        +   + P   
Sbjct: 1   MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 60

Query: 100 ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 159
           A  + SQPL  +  T P  ++ L             A  T + +    A  N+I+VS RQ
Sbjct: 61  AEYAISQPLEGAGATCPTGSEPL-------------AGETPNQALKPGAKSNSIIVSPRQ 120

Query: 160 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 219
           RGNP+LK +RNV W F D++PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KNF L 
Sbjct: 121 RGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALR 180

Query: 220 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 279
           V+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE K AD++  ++
Sbjct: 181 VLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKL 240

Query: 280 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 339
           + D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDLA CPG+G +K RRL+D
Sbjct: 241 EQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFD 296

Query: 340 TFHEPFKRV 349
             HEPF +V
Sbjct: 301 VLHEPFLKV 296

[Close]

BLAST of MC06g1580 vs. ExPASy Swiss-Prot
Match: Q1LZ75 (DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.1e-59
Identity = 129/273 (47.25%), Postives = 175/273 (64.10%), Query Frame = 0


Query: 87  LKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQ--LETSSSSTSASASAAAP------ 146
           + + E   PPP       S    P+  T+P    Q   E + S     A A  P      
Sbjct: 20  IPTDEDVVPPPGAKPLFRSTRSLPTVETSPPPGPQTYAEYALSGPPGGAEATRPVGPEPL 79

Query: 147 ---TNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSL 206
              T + +    A  N+I+VS RQRGNP+L+ +RNV W F D++PDY+LGQS+CAL+LSL
Sbjct: 80  AEETPNQAPKPGAKSNSIIVSPRQRGNPVLRFVRNVPWEFGDVLPDYVLGQSTCALFLSL 139

Query: 207 RYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLE 266
           RYH LHPDY++ R++ L K++ L V+L  VDV+D  + L E+ K  +L DCTL+ AWS E
Sbjct: 140 RYHNLHPDYIHQRLQSLGKSYALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPE 199

Query: 267 ECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHI 326
           E GRYLET K YE K AD++  +++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  +
Sbjct: 200 EAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQL 259

Query: 327 MDASMEDLARCPGIGERKVRRLYDTFHEPFKRV 349
           + AS EDL+ CPG+G +K RRL+D FHEPF +V
Sbjct: 260 IAASREDLSLCPGLGPQKARRLFDVFHEPFLKV 292

[Close]

BLAST of MC06g1580 vs. ExPASy Swiss-Prot
Match: P07903 (DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 9.1e-59
Identity = 132/290 (45.52%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 71  EISQPKPQSFSQAFSF---LKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQLETSSS 130
           E S+P+P        F   L+  E       P   SS  P  P+   +       E + +
Sbjct: 7   EESRPQPSGPPTRRKFVIPLEEEEVPCAGVKPLFRSSRNPTIPATSAHVAPQTYAEYAIT 66

Query: 131 STSASASAAAPTNSLSGS---------SSATRNAILVSNRQRGNPLLKHIRNVRWTFADI 190
                A A  PT S   +         + A  N+I+VS RQRGNP+LK +RNV W F ++
Sbjct: 67  QPPGGAGATVPTGSEPAAGENPSQTLKTGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGEV 126

Query: 191 VPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVT 250
           +PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KNF L V+L  VDV+D  + L E+ 
Sbjct: 127 IPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELA 186

Query: 251 KTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVN 310
           K  +L DCTL+ AWS EE GRYLET K YE K AD++  +++ ++LSR T  LT+V+ VN
Sbjct: 187 KMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEKLEQNFLSRATECLTTVKSVN 246

Query: 311 KTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV 349
           KTD  TL  TFGSL  +  AS EDLA CPG+G +K RRL++  HEPF +V
Sbjct: 247 KTDSQTLLATFGSLEQLFTASREDLALCPGLGPQKARRLFEVLHEPFLKV 296

[Close]

BLAST of MC06g1580 vs. ExPASy Swiss-Prot
Match: Q06182 (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swi10 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.7e-44
Identity = 97/226 (42.92%), Postives = 144/226 (63.72%), Query Frame = 0


Query: 120 DQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIV 179
           +QL  S+       +  A   +    S  T ++ILV+ RQ+GNPLL H+RNV W + DIV
Sbjct: 10  EQLAVSALEEVEKKAGFAQQPTPQKVSRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIV 69

Query: 180 PDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTK 239
           PD+++G   C+L+LSL+YH LHP+Y+Y RI +L K++ L ++L  VDVE+    + E+ K
Sbjct: 70  PDFVMGTGICSLFLSLKYHHLHPEYIYSRISKLGKSYNLRILLILVDVENHQASIQELVK 129

Query: 240 TALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNK 299
           T++++  TL+ AWS EE  RYLET K YEN S  +I  +  TDYLS++   LTS+R +NK
Sbjct: 130 TSIVNQYTLILAWSSEEAARYLETYKAYENMSPALIMEKPSTDYLSQVQSFLTSIRGINK 189

Query: 300 TDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPF 346
           +D ++L + FGSL   + AS ++L +  G G  KV R  +   +PF
Sbjct: 190 SDSLSLLSKFGSLERALVASRDELEQLEGWGPTKVNRFLEAVQQPF 235

[Close]

BLAST of MC06g1580 vs. NCBI nr
Match: XP_022159707.1 (DNA excision repair protein ERCC-1 isoform X1 [Momordica charantia])

HSP 1 Score: 757 bits (1954), Expect = 1.80e-274
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 40  MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 99
           MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP
Sbjct: 1   MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 60

Query: 100 ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 159
           ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ
Sbjct: 61  ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 120

Query: 160 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 219
           RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC
Sbjct: 121 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 180

Query: 220 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 279
           VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM
Sbjct: 181 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 240

Query: 280 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 339
           DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD
Sbjct: 241 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 300

Query: 340 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA 399
           TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA
Sbjct: 301 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA 360

Query: 400 FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 436
           FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ
Sbjct: 361 FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 397

[Close]

BLAST of MC06g1580 vs. NCBI nr
Match: XP_038884592.1 (DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida] >XP_038884593.1 DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 611 bits (1576), Expect = 4.87e-217
Identity = 328/399 (82.21%), Postives = 350/399 (87.72%), Query Frame = 0


Query: 40  MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 99
           ME+  EE+NLQQT HKKSKTIIKIPSYQEV+E SQPK QSFSQAF+FLKSSEFYSPPP P
Sbjct: 1   MEEGNEEENLQQTAHKKSKTIIKIPSYQEVIESSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 100 ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 159
           ASASSSQ L  S+ITNPRKNDQL+TSSSSTSAS +   P NS S  SS + NAILVSNRQ
Sbjct: 61  ASASSSQSLSASEITNPRKNDQLDTSSSSTSASTTT--PNNSSSVPSSVSHNAILVSNRQ 120

Query: 160 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 219
           +GNPLLKH+RNVRW FAD+VPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 
Sbjct: 121 KGNPLLKHVRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLR 180

Query: 220 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 279
           VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK AD+IQGQM
Sbjct: 181 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQM 240

Query: 280 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 339
           DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD
Sbjct: 241 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 300

Query: 340 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE--DVDGKKTEDAGKLKKEPDLTIKSALS 399
           TFHEPFKR+VSTHP  PETP + NT+P S  E  DVD K+TED  + KKEP+L IKSALS
Sbjct: 301 TFHEPFKRIVSTHPGAPETPTQNNTKPRSMDEEQDVDEKRTEDGSQHKKEPELNIKSALS 360

Query: 400 AAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 436
           AAFAKY +KIGK+ S  +GEE+         EPESSNLQ
Sbjct: 361 AAFAKYADKIGKNCSMPRGEER--------GEPESSNLQ 389

[Close]

BLAST of MC06g1580 vs. NCBI nr
Match: XP_022968743.1 (DNA excision repair protein ERCC-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 610 bits (1574), Expect = 9.45e-217
Identity = 329/384 (85.68%), Postives = 345/384 (89.84%), Query Frame = 0


Query: 40  MEQREEEDNLQQTV-HKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPN 99
           MEQ +EE+NLQQT  HKK KTIIKI SYQEV++ SQPK QSFSQAF+FLKS+EFYSPPP 
Sbjct: 1   MEQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60

Query: 100 PASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNR 159
           P  ASSSQ LP S ITNPRKNDQL+TS SSTSA  SAA P NSLS SSS TRNAILVSNR
Sbjct: 61  PVPASSSQSLPDSDITNPRKNDQLDTSCSSTSA--SAATPANSLSASSSVTRNAILVSNR 120

Query: 160 QRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 219
           QRGNPLLKHIRNVRWTFAD+VPDYLLG+SSCALYLSLRYHLLHPDYLYYRIRELQKNFKL
Sbjct: 121 QRGNPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 180

Query: 220 CVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQ 279
            VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK AD+IQGQ
Sbjct: 181 RVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQ 240

Query: 280 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLY 339
           MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLY
Sbjct: 241 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLY 300

Query: 340 DTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE--DVDGKKTEDAGKLKKEPDLTIKSAL 399
           DTFHEPFKRVVSTHP V ETP + NTEP   GE  DVDGK TEDA + KKEP+L IKSAL
Sbjct: 301 DTFHEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSAL 360

Query: 400 SAAFAKYGNKIGKSNSRSQGEEKE 420
           SAAFAKY  KIGKS S+ +GEEKE
Sbjct: 361 SAAFAKYSAKIGKS-SKPEGEEKE 381

[Close]

BLAST of MC06g1580 vs. NCBI nr
Match: KAG7023940.1 (DNA excision repair protein ERCC-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612 bits (1578), Expect = 1.16e-216
Identity = 337/426 (79.11%), Postives = 358/426 (84.04%), Query Frame = 0


Query: 26  GARLNVPNSFENLK------------MEQR-EEEDNLQQTVHKKSKTIIKIPSYQEVLEI 85
           G + ++ NSF+               MEQ+ +EE+NLQQT HKK KTIIKIPSYQEV++ 
Sbjct: 19  GRKKHIRNSFQRFNFRSSKETYPCKIMEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDS 78

Query: 86  SQPKPQSFSQAFSFLKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSAS 145
           SQPK QSFSQAF+FLKS+EFYSPPP P  AS SQ LP S ITNPRKNDQL+T  SSTSA 
Sbjct: 79  SQPKSQSFSQAFAFLKSTEFYSPPPQPVPASPSQSLPDSDITNPRKNDQLDTPCSSTSA- 138

Query: 146 ASAAAPTNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALY 205
            SAA P N LS SSS TRNAILVSNRQRGNPLLKHIRNVRWTFAD+VPDYLLG SSCALY
Sbjct: 139 -SAATPANRLSASSSVTRNAILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALY 198

Query: 206 LSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 265
           LSLRYHLLHPDYLYYRIRELQKNFKL VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW
Sbjct: 199 LSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 258

Query: 266 SLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 325
           SLEECGRYLETIKVYENK AD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL
Sbjct: 259 SLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 318

Query: 326 SHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE- 385
           SH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHP V ETP + NTEP S GE 
Sbjct: 319 SHVMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVLETPTQNNTEPRSVGEE 378

Query: 386 -DVDGKKTEDAGKLKKEPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEP 436
            DVDGK TEDA + KKEP+L IKSALSAAFAKY  KIGKS S+ +GEEKE         P
Sbjct: 379 QDVDGKNTEDASQHKKEPELNIKSALSAAFAKYSAKIGKS-SKPEGEEKE---------P 432

[Close]

BLAST of MC06g1580 vs. NCBI nr
Match: KAG6590378.1 (DNA excision repair protein ERCC-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 611 bits (1575), Expect = 3.33e-216
Identity = 336/426 (78.87%), Postives = 358/426 (84.04%), Query Frame = 0


Query: 26  GARLNVPNSFENLK------------MEQR-EEEDNLQQTVHKKSKTIIKIPSYQEVLEI 85
           G + ++ NSF+               MEQ+ +EE+NLQQT HKK KTIIKIPSYQEV++ 
Sbjct: 19  GRKKHIRNSFQRFNFRSSKETYPCKIMEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDS 78

Query: 86  SQPKPQSFSQAFSFLKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSAS 145
           SQPK QSFSQAF+FLKS+EFYSPPP P  AS SQ LP S ITNPRKNDQL+T  SSTSA 
Sbjct: 79  SQPKSQSFSQAFAFLKSTEFYSPPPQPVPASPSQSLPDSDITNPRKNDQLDTPCSSTSA- 138

Query: 146 ASAAAPTNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALY 205
            SAA P N LS SSS TRNAILVSNRQRGNPLLKHIRNVRWTFAD+VPDYLLG SSCALY
Sbjct: 139 -SAATPANRLSASSSVTRNAILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALY 198

Query: 206 LSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 265
           LSLRYHLLHPDYLYYRIRELQKNFKL VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW
Sbjct: 199 LSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 258

Query: 266 SLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 325
           SLEECGRYLETIKVYENK AD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL
Sbjct: 259 SLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 318

Query: 326 SHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE- 385
           SH+MDASMEDLARCPGIGERKVRRLYDT+HEPFKRVVSTHP V ETP + NTEP S GE 
Sbjct: 319 SHVMDASMEDLARCPGIGERKVRRLYDTYHEPFKRVVSTHPAVLETPTQNNTEPRSVGEE 378

Query: 386 -DVDGKKTEDAGKLKKEPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEP 436
            DVDGK TEDA + KKEP+L IKSALSAAFAKY  KIGKS S+ +GEEKE         P
Sbjct: 379 QDVDGKNTEDASQHKKEPELNIKSALSAAFAKYSAKIGKS-SKPEGEEKE---------P 432

[Close]

BLAST of MC06g1580 vs. ExPASy TrEMBL
Match: A0A6J1E0J7 (DNA excision repair protein ERCC-1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026050 PE=3 SV=1)

HSP 1 Score: 757 bits (1954), Expect = 8.73e-275
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 40  MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 99
           MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP
Sbjct: 1   MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 60

Query: 100 ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 159
           ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ
Sbjct: 61  ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 120

Query: 160 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 219
           RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC
Sbjct: 121 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 180

Query: 220 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 279
           VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM
Sbjct: 181 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 240

Query: 280 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 339
           DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD
Sbjct: 241 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 300

Query: 340 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA 399
           TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA
Sbjct: 301 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGEDVDGKKTEDAGKLKKEPDLTIKSALSAA 360

Query: 400 FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 436
           FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ
Sbjct: 361 FAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 397

[Close]

BLAST of MC06g1580 vs. ExPASy TrEMBL
Match: A0A6J1HYZ8 (DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467887 PE=3 SV=1)

HSP 1 Score: 610 bits (1574), Expect = 4.58e-217
Identity = 329/384 (85.68%), Postives = 345/384 (89.84%), Query Frame = 0


Query: 40  MEQREEEDNLQQTV-HKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPN 99
           MEQ +EE+NLQQT  HKK KTIIKI SYQEV++ SQPK QSFSQAF+FLKS+EFYSPPP 
Sbjct: 1   MEQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60

Query: 100 PASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNR 159
           P  ASSSQ LP S ITNPRKNDQL+TS SSTSA  SAA P NSLS SSS TRNAILVSNR
Sbjct: 61  PVPASSSQSLPDSDITNPRKNDQLDTSCSSTSA--SAATPANSLSASSSVTRNAILVSNR 120

Query: 160 QRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 219
           QRGNPLLKHIRNVRWTFAD+VPDYLLG+SSCALYLSLRYHLLHPDYLYYRIRELQKNFKL
Sbjct: 121 QRGNPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 180

Query: 220 CVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQ 279
            VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK AD+IQGQ
Sbjct: 181 RVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQ 240

Query: 280 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLY 339
           MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLY
Sbjct: 241 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLY 300

Query: 340 DTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE--DVDGKKTEDAGKLKKEPDLTIKSAL 399
           DTFHEPFKRVVSTHP V ETP + NTEP   GE  DVDGK TEDA + KKEP+L IKSAL
Sbjct: 301 DTFHEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSAL 360

Query: 400 SAAFAKYGNKIGKSNSRSQGEEKE 420
           SAAFAKY  KIGKS S+ +GEEKE
Sbjct: 361 SAAFAKYSAKIGKS-SKPEGEEKE 381

[Close]

BLAST of MC06g1580 vs. ExPASy TrEMBL
Match: A0A6J1HED7 (DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462101 PE=3 SV=1)

HSP 1 Score: 610 bits (1572), Expect = 4.61e-216
Identity = 336/426 (78.87%), Postives = 359/426 (84.27%), Query Frame = 0


Query: 26  GARLNVPNSFENLK------------MEQR-EEEDNLQQTVHKKSKTIIKIPSYQEVLEI 85
           G + ++ NSF+               MEQ+ +EE+NLQQT HKK KTIIKIPSYQEV++ 
Sbjct: 19  GRKKHIRNSFQRFNFRSSKETYPCKIMEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDS 78

Query: 86  SQPKPQSFSQAFSFLKSSEFYSPPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSAS 145
           SQPK QSFSQAF+FLKS+EFYSPPP P  ASSSQ LP S ITNPRKNDQL+T  SSTSA 
Sbjct: 79  SQPKSQSFSQAFAFLKSTEFYSPPPQPVPASSSQSLPDSDITNPRKNDQLDTPCSSTSA- 138

Query: 146 ASAAAPTNSLSGSSSATRNAILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALY 205
            SAA P N LS SSS TRNAILVSNRQRGNPLLKHIRNVRWTFAD+VPDYLLG SSCALY
Sbjct: 139 -SAATPANRLSASSSVTRNAILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALY 198

Query: 206 LSLRYHLLHPDYLYYRIRELQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 265
           LSLRYHLLHPDYLYYRIRELQKNFKL VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW
Sbjct: 199 LSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAW 258

Query: 266 SLEECGRYLETIKVYENKSADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 325
           SLEECGRYLETIKVYENK AD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL
Sbjct: 259 SLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSL 318

Query: 326 SHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE- 385
           SH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHP V ETP + +TEP S  E 
Sbjct: 319 SHVMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPSVLETPTQNSTEPRSIREE 378

Query: 386 -DVDGKKTEDAGKLKKEPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEP 436
            DVDGK TEDA + KKEP+L+IKSALSAAFAKY  KIGKS S+ +GEEKE         P
Sbjct: 379 QDVDGKNTEDASQHKKEPELSIKSALSAAFAKYSAKIGKS-SKPEGEEKE---------P 432

[Close]

BLAST of MC06g1580 vs. ExPASy TrEMBL
Match: A0A1S3CIE0 (DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 SV=1)

HSP 1 Score: 600 bits (1546), Expect = 8.97e-213
Identity = 326/400 (81.50%), Postives = 346/400 (86.50%), Query Frame = 0


Query: 40  MEQREEEDNLQQTVHKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPNP 99
           ME+   E+N QQT HKKSKTIIKIPSYQEV + SQPK QSFSQAF+FLKSSEFYSPPP P
Sbjct: 1   MEEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKP 60

Query: 100 ASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNRQ 159
            S SSSQ LP S ITNPRKNDQL+TSSSSTSA  S A P NSLS SSS +RNAILVSNRQ
Sbjct: 61  PSPSSSQSLPASNITNPRKNDQLDTSSSSTSA--STATPVNSLSVSSSVSRNAILVSNRQ 120

Query: 160 RGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLC 219
           +GNPLLKHIRNVRW FAD+VPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 
Sbjct: 121 KGNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLR 180

Query: 220 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQM 279
           VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK AD+IQGQM
Sbjct: 181 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQM 240

Query: 280 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 339
           DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD
Sbjct: 241 DTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYD 300

Query: 340 TFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE--DVDGKKTEDAGKL-KKEPDLTIKSAL 399
           TFHEPFKR+VSTHP VPETP + +T+P S  E  DVDGK+ E+ G   KKEP L +KSAL
Sbjct: 301 TFHEPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSAL 360

Query: 400 SAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 436
           SAAFAKY +KI KS+S  Q +E          EPESSN+Q
Sbjct: 361 SAAFAKYADKIAKSSSMPQEKEI--------GEPESSNVQ 390

[Close]

BLAST of MC06g1580 vs. ExPASy TrEMBL
Match: A0A0A0KDK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014860 PE=3 SV=1)

HSP 1 Score: 599 bits (1544), Expect = 1.88e-212
Identity = 328/401 (81.80%), Postives = 347/401 (86.53%), Query Frame = 0


Query: 40  MEQREEEDNLQQTV-HKKSKTIIKIPSYQEVLEISQPKPQSFSQAFSFLKSSEFYSPPPN 99
           ME+   EDN QQT  HKKSKTIIKIPSYQEV++ SQP  QSFSQAF+FLKSSEFYSPPP 
Sbjct: 1   MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPK 60

Query: 100 PASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRNAILVSNR 159
           P S SSSQ LPPS ITNPRKNDQL+TSSSSTSA  SAA P NSLS SSS +RNAILVSNR
Sbjct: 61  PPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSA--SAATPVNSLSVSSSVSRNAILVSNR 120

Query: 160 QRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 219
           Q+GNPLLKHIRNVRW FAD+VPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL
Sbjct: 121 QKGNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 180

Query: 220 CVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQ 279
            V+LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK AD+IQG 
Sbjct: 181 RVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGH 240

Query: 280 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLY 339
           MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLY
Sbjct: 241 MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLY 300

Query: 340 DTFHEPFKRVVSTHPDVPETPAEKNTEPLSTGE--DVDGKKTEDAGKL-KKEPDLTIKSA 399
           DTFHEPFKRVVSTHP VPETP + +T+P S+ E  DVDGK+ E+ G   KKEP L +KSA
Sbjct: 301 DTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSA 360

Query: 400 LSAAFAKYGNKIGKSNSRSQGEEKEETSVPLNSEPESSNLQ 436
           LSAAFAKY +KI KS S  Q +EK         EPESSN Q
Sbjct: 361 LSAAFAKYADKIAKSGSIPQEKEK--------GEPESSNTQ 391

[Close]

BLAST of MC06g1580 vs. TAIR 10
Match: AT3G05210.1 (nucleotide repair protein, putative )

HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-128
Identity = 256/403 (63.52%), Postives = 309/403 (76.67%), Query Frame = 0


Query: 44  EEEDNLQQTVHKKSKT--IIKIPSYQEVLEISQPK---------PQSFSQAFSFLKSSEF 103
           E+  +L Q + +K KT  +I +PSYQEVLE SQ K          QSFSQAF+F+KSS+ 
Sbjct: 9   EKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDV 68

Query: 104 YS-PPPNPASASSSQPLPPSQITNPRKNDQLETSSSSTSASASAAAPTNSLSGSSSATRN 163
           YS PPP+ A+ASSSQP   SQ+  P  + Q   +  ++S+S   A  T S+  +++  RN
Sbjct: 69  YSPPPPSSAAASSSQPSGASQV--PHSSSQTHQTDGASSSSTPVA--TGSVPSNTTQNRN 128

Query: 164 AILVSNRQRGNPLLKHIRNVRWTFADIVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRE 223
           AILVS+RQ+GNPLLKHIRNV+W F+DI+PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 129 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 188

Query: 224 LQKNFKLCVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKS 283
           LQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENK 
Sbjct: 189 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 248

Query: 284 ADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGE 343
           AD+IQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGE
Sbjct: 249 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 308

Query: 344 RKVRRLYDTFHEPFKRVVSTHPDV-----PETPAEKNT---EPLSTGEDVDGKKTEDAGK 403
           RKV+RLYDTFHEPFKR  S++P V     PE P EK+    EP+   ED      ED+ K
Sbjct: 309 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDF----VEDSRK 368

Query: 404 LKK---EPDLTIKSALSAAFAKYGNKIGKSNSRSQGEEKEETS 424
            KK   EP+ T+K+ALSA FA+Y +++ K   +   +EK+ T+
Sbjct: 369 RKKKEPEPEKTVKTALSAVFARYSDRLSKKKEKQ--KEKDTTT 401

The following BLAST results are available for this feature:

BLAST of MC06g1580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA98	2.1e-127	63.52	DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2...	[more]
P07992	4.8e-60	43.69	DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1	[more]
Q1LZ75	3.1e-59	47.25	DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1	[more]
P07903	9.1e-59	45.52	DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2	[more]
Q06182	1.7e-44	42.92	Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of MC06g1580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159707.1	1.80e-274	100.00	DNA excision repair protein ERCC-1 isoform X1 [Momordica charantia]	[more]
XP_038884592.1	4.87e-217	82.21	DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida] >XP_038884593....	[more]
XP_022968743.1	9.45e-217	85.68	DNA excision repair protein ERCC-1 isoform X1 [Cucurbita maxima]	[more]
KAG7023940.1	1.16e-216	79.11	DNA excision repair protein ERCC-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590378.1	3.33e-216	78.87	DNA excision repair protein ERCC-1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MC06g1580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0J7	8.73e-275	100.00	DNA excision repair protein ERCC-1 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1HYZ8	4.58e-217	85.68	DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HED7	4.61e-216	78.87	DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3CIE0	8.97e-213	81.50	DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 ...	[more]
A0A0A0KDK6	1.88e-212	81.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014860 PE=3 SV=1	[more]

BLAST of MC06g1580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05210.1	1.5e-128	63.52	nucleotide repair protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	GENE3D	1.10.150.20		coord: 266..354 e-value: 1.6E-33 score: 116.2
None	No IPR available	GENE3D	3.40.50.10130		coord: 151..265 e-value: 4.8E-49 score: 166.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
IPR004579	ERCC1/RAD10/SWI10 family	TIGRFAM	TIGR00597	TIGR00597	coord: 151..262 e-value: 8.0E-43 score: 142.9
IPR004579	ERCC1/RAD10/SWI10 family	PFAM	PF03834	Rad10	coord: 153..265 e-value: 1.8E-43 score: 147.2
IPR004579	ERCC1/RAD10/SWI10 family	PANTHER	PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	coord: 63..351
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 151..277
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 239..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1580.1	MC06g1580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000710	meiotic mismatch repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion
biological_process	GO:0070914	UV-damage excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0070522	ERCC4-ERCC1 complex
cellular_component	GO:0000110	nucleotide-excision repair factor 1 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003697	single-stranded DNA binding