MC06g1552 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1552
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	REF/SRPP-like protein At3g05500
Location	MC06: 22751389 .. 22753601 (-)
RNA-Seq Expression	MC06g1552
Synteny	MC06g1552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGGTGTTGCCCCTCTCAGATTGTGCAAATAGAAATAAAGTTGCAATTTGGTAAACAAAATTAAATAAACTAAAATTTAGTTATTCAACTTTAGTTTATAATGATTTGGTCCTTTTAGTCTAAATGAAAAATCTTATTAAAATTAAGTATTAAATTTTATTATATAACAACGGATGGATGGAGTGGAGGAACTCTCACGCGGATTCTAGAACCATCCATAGAGGATTCTTAATCCCTAAGGAACAGTCAGCAGGTTTTTGTACCATGGCCGTTCGTTTCAATTCAACCGACTCTCTAGCCGCGTTCTTCTCTCCTATAAATCCCAAATCTTCCATCAATCGATTATAACGCCCACCAATTCCATTCCATTTCCCACACAAAGCACATCAGAATTTCCTTCCATTTCCAAATCCTAAACTCCCATCCTAAGTTTCTCTCGATTTTGGCTATGGCTGAACCCGATCCTTCCGTGCAGCAACTCGAAATGGTATAGTATCATCCTTCCTCTTCGCATTTCTCTTTTTCGAATTTATTTCTCTTGTTTTATGATCGGAATTTGAAATTTCTCCATCCCTAAATCGTAACCTGATCGGATTTCTCGATTCTTGTGCGAAATCTGCTTTTTCTGAAGCTATGAAGGTTGATTCGTTGATATTTTTGGTTGAATTTTTGTTTCTGAATGTTGGAATTGGTGTTTAGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTACCTAGCGTTCGTTCAAACGGCGGCGTTTTTCGCGACGGCGTGCTTCTTTAACGTTTATGGCTACGCCAAGGACCGGTCCGGTCCGCTGAAGCCCGGCGTCGAGACGGTCGAGGGCACCGTGAAGTCCGTTGTCGGACCGCTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGGTTTCTTACTTCGCTTTCGTTCTTACATAGCTGCTACTGTTCTTGATTTTTCATATGGCTATATGTACGACAATGATTTGAATTTGTTATCTGTATGATCTTCGTACAAATTTCTCTTGCATTTCTTCTTGGATAGATATACCAAATGGTTCTATGATAAAACATGATCAATTATTTACGTTTCAATTCCATTTTCTCCCTCCTTAACTTTCAAGATATTTGTCCTTAATAAAAAAAGTCTCTTACTTTTACAATGACTTTAATAGTCTTTTATTCCATTTTGAGGCAGTATTATGGGACAAGAAATGGGTATTTTAGTAGTTAAAGGACTATTTTAAAAGTTTAGACCAATGGTTTGTTGATTGGTTGGTTTTTTTATTTTTTTAAAGTTCAGGATCATTTTTAAGTTTGTGAACAAAATGGTTGAAGATTAGGGCCAAAATGGTTGTTTTCTAAAGATCCCAAGAACCAAAAAACGCTGAGCATTAAGAGTTGAATTCTCTTATAACACCAAGAAATTTAACGGGAAAATCATTTTGTTTCGATTGTAAATGTGCAGGTAGATGAGTCAGTGACCAAGATTGATCGCCATGTTCCTCCAACCGTCAAGCAAGCCTCCTCGCAGGCTGTGTCCGCAGCACAGCAAGCGCCTGAGGTTGCCCGATCTGTAGCCTCCGAGGTCCGACGCTCCGGCCTCAAAGACTCCCTCTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCCACTGCGAAGCAACTCTACTTCGAATACGAGCCTAAGGCTGAGCAATGCGCGGCTTTGGCATGGCACAAGCTCAACCAGCTCCCCGTCTTCCCCCACGTTGCGCAGGCCATCTTGCCAACAGCAGCGTACTGCACCGAGAAATACAACGAGACTGTGCGCACCACAGCCGAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTGCCAACCGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAGTTGAGGTGGAGCCATTGGTGAGTTGAGAGGCCTTGGATTTCTTCTTGGCTTCTTATATCTTATGTAATAGGAAACGTAATAGATCTTTGTTCTACTGAATGATTTAACTGTTATGTTTGAGAAATTATTCAGTGTGGCAGTCAGAATTTATACTTGTTTGTATGTTGGTATGTTGTAGTTTTTCTGAGGCTTTGTTCCTTTGGCATCAGAAATAGCTATGGCATTTACTTTTGAGGGGTTTTGATGAATATGAACTATATAGTTACGATATTATACGAGAAAAACA

mRNA sequence

GCGGGTGTTGCCCCTCTCAGATTGTGCAAATAGAAATAAAGTTGCAATTTGGTAAACAAAATTAAATAAACTAAAATTTAGTTATTCAACTTTAGTTTATAATGATTTGGTCCTTTTAGTCTAAATGAAAAATCTTATTAAAATTAAGTATTAAATTTTATTATATAACAACGGATGGATGGAGTGGAGGAACTCTCACGCGGATTCTAGAACCATCCATAGAGGATTCTTAATCCCTAAGGAACAGTCAGCAGGTTTTTGTACCATGGCCGTTCGTTTCAATTCAACCGACTCTCTAGCCGCGTTCTTCTCTCCTATAAATCCCAAATCTTCCATCAATCGATTATAACGCCCACCAATTCCATTCCATTTCCCACACAAAGCACATCAGAATTTCCTTCCATTTCCAAATCCTAAACTCCCATCCTAAGTTTCTCTCGATTTTGGCTATGGCTGAACCCGATCCTTCCGTGCAGCAACTCGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTACCTAGCGTTCGTTCAAACGGCGGCGTTTTTCGCGACGGCGTGCTTCTTTAACGTTTATGGCTACGCCAAGGACCGGTCCGGTCCGCTGAAGCCCGGCGTCGAGACGGTCGAGGGCACCGTGAAGTCCGTTGTCGGACCGCTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTAGATGAGTCAGTGACCAAGATTGATCGCCATGTTCCTCCAACCGTCAAGCAAGCCTCCTCGCAGGCTGTGTCCGCAGCACAGCAAGCGCCTGAGGTTGCCCGATCTGTAGCCTCCGAGGTCCGACGCTCCGGCCTCAAAGACTCCCTCTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCCACTGCGAAGCAACTCTACTTCGAATACGAGCCTAAGGCTGAGCAATGCGCGGCTTTGGCATGGCACAAGCTCAACCAGCTCCCCGTCTTCCCCCACGTTGCGCAGGCCATCTTGCCAACAGCAGCGTACTGCACCGAGAAATACAACGAGACTGTGCGCACCACAGCCGAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTGCCAACCGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAGTTGAGGTGGAGCCATTGGTGAGTTGAGAGGCCTTGGATTTCTTCTTGGCTTCTTATATCTTATGTAATAGGAAACGTAATAGATCTTTGTTCTACTGAATGATTTAACTGTTATGTTTGAGAAATTATTCAGTGTGGCAGTCAGAATTTATACTTGTTTGTATGTTGGTATGTTGTAGTTTTTCTGAGGCTTTGTTCCTTTGGCATCAGAAATAGCTATGGCATTTACTTTTGAGGGGTTTTGATGAATATGAACTATATAGTTACGATATTATACGAGAAAAACA

Coding sequence (CDS)

ATGGCTGAACCCGATCCTTCCGTGCAGCAACTCGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTACCTAGCGTTCGTTCAAACGGCGGCGTTTTTCGCGACGGCGTGCTTCTTTAACGTTTATGGCTACGCCAAGGACCGGTCCGGTCCGCTGAAGCCCGGCGTCGAGACGGTCGAGGGCACCGTGAAGTCCGTTGTCGGACCGCTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTAGATGAGTCAGTGACCAAGATTGATCGCCATGTTCCTCCAACCGTCAAGCAAGCCTCCTCGCAGGCTGTGTCCGCAGCACAGCAAGCGCCTGAGGTTGCCCGATCTGTAGCCTCCGAGGTCCGACGCTCCGGCCTCAAAGACTCCCTCTCTGGGATTGTGAAATCTGTGTATGCCAAGTACGAGCCCACTGCGAAGCAACTCTACTTCGAATACGAGCCTAAGGCTGAGCAATGCGCGGCTTTGGCATGGCACAAGCTCAACCAGCTCCCCGTCTTCCCCCACGTTGCGCAGGCCATCTTGCCAACAGCAGCGTACTGCACCGAGAAATACAACGAGACTGTGCGCACCACAGCCGAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTGCCAACCGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAGTTGAGGTGGAGCCATTGGTGAGTTGA

Protein sequence

MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPLVS

Homology

[Close]

BLAST of MC06g1552 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.3e-80
Identity = 150/238 (63.03%), Postives = 194/238 (81.51%), Query Frame = 0


Query: 3   EPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEG 62
           + D +  +L+M  + E+ERLKYL FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG
Sbjct: 4   QTDLAQPKLDM-TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEG 63

Query: 63  TVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEV 122
            VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP V
Sbjct: 64  AVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIV 123

Query: 123 ARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVF 182
           AR++ASEVRR+G+ ++ SG+ KSVY+KYEP AK+LY  YEPKAEQCA  AW KLNQLP+F
Sbjct: 124 ARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLF 183

Query: 183 PHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 241
           P +AQ  +PTAA+C+EKYN+TV   AEKGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 184 PRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of MC06g1552 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 136/230 (59.13%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MAE +   +Q       EE+RLKYL FVQ AA +   CF ++Y YAK+ SGPLKPGV+TV
Sbjct: 1   MAESE--AKQQPETVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  VK+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           E+A +VASEV+R G+ D+   I K+VY+K EPTAK+L  +YEP AEQ A  AW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTAAY +EKYN++V  TAE+GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

[Close]

BLAST of MC06g1552 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.2e-56
Identity = 116/219 (52.97%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 12  EMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YL FVQ AA          Y YAK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +ARS A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILP 191
           ++GL  + +G+ KS  A+ EP A+ LY  YEP AE+ AA AW  LN+LP+ P V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of MC06g1552 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 5.2e-56
Identity = 116/219 (52.97%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 12  EMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YL FVQ AA          Y YAK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +ARS A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILP 191
           ++GL  + +G+ KS  A+ EP A+ LY  YEP AE+ AA AW  LN+LP+ P V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of MC06g1552 vs. ExPASy Swiss-Prot
Match: Q41112 (Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-53
Identity = 113/190 (59.47%), Postives = 136/190 (71.58%), Query Frame = 0


Query: 42  VYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHV 101
           +Y YAK+R+GPLKPGV TVE  VK+VV P+Y++FH VP+E+LK+ DRKV E    +DRHV
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHV 65

Query: 102 PPTVKQASSQAVSAAQQAPEVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEY 161
           P  VK+ SSQ           ARSV SEVRR    D +S   K+VY+KYEPT        
Sbjct: 66  PSNVKKVSSQ-----------ARSVVSEVRR----DGVSTFAKTVYSKYEPT-------- 125

Query: 162 EPKAEQCAALAWHKLNQLPVFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLV 221
              AEQCA  AW KLNQLP+FP VA A+LP AAYCTEKYNE + ++AEKGY+VS+YLPLV
Sbjct: 126 ---AEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLV 165

Query: 222 PTERIAKVFS 232
           PTE+IAKVFS
Sbjct: 186 PTEKIAKVFS 165

[Close]

BLAST of MC06g1552 vs. NCBI nr
Match: XP_022146027.1 (REF/SRPP-like protein At3g05500 [Momordica charantia])

HSP 1 Score: 473 bits (1216), Expect = 7.05e-168
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP
Sbjct: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL
Sbjct: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240

Query: 241 VS 242
           VS
Sbjct: 241 VS 242

[Close]

BLAST of MC06g1552 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416 bits (1068), Expect = 2.55e-145
Identity = 209/242 (86.36%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ +PS Q  EMAARAEEERLKYL FVQTAAF AT CFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           E+AR+VA EVR +GLKDS+SGIVKSVYAKYEPTAKQLY +YEPKAEQCAA AWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTA YCTEKYNETV++T++KGYKVSSYLPLVPTERIAKVFSKDR+E+EPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415 bits (1067), Expect = 3.62e-145
Identity = 209/242 (86.36%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ +PS Q  EMAARAEEERLKYL FVQTAAF AT CFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           E+AR+VA EVR +GLKDS+SGIVKSVYAKYEPTAKQLY +YEPKAEQCAA AWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTA YCTEKYNETV++T++KGYKVSSYLPLVPTERIAKVFSKDR+E+EPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 415 bits (1067), Expect = 3.62e-145
Identity = 213/242 (88.02%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ D S Q+ +MA RA+E+RLKYL FVQTAAF AT CFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           EVAR+VASEVRRSGLKDS+SGIVKSVYAKYEP+AKQLY +YEPKAEQCAA AWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTAAYCTEKYNETVRT+A+KGYKVSSYLPLVPTERIAKVFSK+ VE+EPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. NCBI nr
Match: XP_038879426.1 (REF/SRPP-like protein At3g05500 [Benincasa hispida])

HSP 1 Score: 415 bits (1066), Expect = 5.14e-145
Identity = 212/242 (87.60%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MAE DPS Q+ E  ARAE+ERLKYL FVQTA F AT CFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MAESDPSSQRQETVARAEQERLKYLEFVQTATFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVT+IDRHVPPTVKQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTRIDRHVPPTVKQASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           EVARSVASEVRR+GLK+S+SGIVKSVYAK EPTAK+LY +YEPKAEQCA  AWHKLNQLP
Sbjct: 121 EVARSVASEVRRTGLKESVSGIVKSVYAKCEPTAKELYSKYEPKAEQCAVSAWHKLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTAAYCTEKYNETVRT+AEKGYKVSSYLPLVPTERIA+VFSK+ VE++PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAEVFSKNGVEMKPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. ExPASy TrEMBL
Match: A0A6J1CYC3 (REF/SRPP-like protein At3g05500 OS=Momordica charantia OX=3673 GN=LOC111015336 PE=3 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 3.41e-168
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP
Sbjct: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL
Sbjct: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240

Query: 241 VS 242
           VS
Sbjct: 241 VS 242

[Close]

BLAST of MC06g1552 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 1.75e-145
Identity = 213/242 (88.02%), Postives = 228/242 (94.21%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ D S Q+ +MA RA+E+RLKYL FVQTAAF AT CFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           EVAR+VASEVRRSGLKDS+SGIVKSVYAKYEP+AKQLY +YEPKAEQCAA AWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTAAYCTEKYNETVRT+A+KGYKVSSYLPLVPTERIAKVFSK+ VE+EPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 1.44e-144
Identity = 208/242 (85.95%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ +PS Q  EMAARAEEERLKYL FVQTAAF AT CFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+KQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           E+AR+VA EVR +GLKDS+SGIVKSVYAKYEPTAKQLY +YEPKAEQCAA AWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTA YCTEKYNETV++T++KGYKVSSYLPLVPTERIAKVFSKDR+E+EPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 2.04e-144
Identity = 207/242 (85.54%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60
           MA+ +PS Q  EMAARAEEERLKYL FVQTAAF A+ CFFN YGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180
           E+AR+VA EVR +GLKDS+SGIVKSVYAKYEPTAKQLY +YEPKAEQCAA AWH+LNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240
           VFP VAQAILPTA YCTEKYNETV++T++KGYKVSSYLPLVPTERIAKVFSKDR+E+EPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VS 242
           V+
Sbjct: 241 VN 242

[Close]

BLAST of MC06g1552 vs. ExPASy TrEMBL
Match: A0A5D3CFW4 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003980 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 6.30e-143
Identity = 208/230 (90.43%), Postives = 220/230 (95.65%), Query Frame = 0


Query: 13  MAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLY 72
           MA RA+E+RLKYL FVQTAAF AT CFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 
Sbjct: 1   MAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLC 60

Query: 73  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVRR 132
           NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQA+SAAQQAPEVAR+VASEVRR
Sbjct: 61  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAPEVARNVASEVRR 120

Query: 133 SGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILPT 192
           SGLKDS+SGIVKSVYAKYEP+AKQLY +YEPKAEQCAA AWHKLNQLPVFP VAQAILPT
Sbjct: 121 SGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT 180

Query: 193 AAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPLVS 242
           AAYCTEKYNETVRT+A+KGYKVSSYLPLVPTERIAKVFSK+ VE+EPLV+
Sbjct: 181 AAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN 230

[Close]

BLAST of MC06g1552 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-81
Identity = 150/238 (63.03%), Postives = 194/238 (81.51%), Query Frame = 0


Query: 3   EPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEG 62
           + D +  +L+M  + E+ERLKYL FVQ AA  A   F  +Y  AKD+SGPLKPGVE+VEG
Sbjct: 4   QTDLAQPKLDM-TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEG 63

Query: 63  TVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEV 122
            VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP V
Sbjct: 64  AVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIV 123

Query: 123 ARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVF 182
           AR++ASEVRR+G+ ++ SG+ KSVY+KYEP AK+LY  YEPKAEQCA  AW KLNQLP+F
Sbjct: 124 ARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLF 183

Query: 183 PHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 241
           P +AQ  +PTAA+C+EKYN+TV   AEKGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 184 PRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of MC06g1552 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-46
Identity = 97/221 (43.89%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 18  EEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+L F+Q AA +  ACF  +Y  AKD +GPLK GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVRRSGLKD 137
           VP ++L FVDRKVD+    ++ +VP  VKQASSQA+           +VA+EV+R+G+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVD 156

Query: 138 SLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILPTAAYCT 197
           +   I +SV  KYEP            AE  AA  W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVE 239
           EKYN+ VR   ++ Y  + YLP++P E+I+ +  +D+   +
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQCRAD 235

[Close]

BLAST of MC06g1552 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 82/217 (37.79%), Postives = 108/217 (49.77%), Query Frame = 0


Query: 17  AEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+LAFV+ A     A   N+Y YAK  SGPLK  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVRRSGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A+S   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILPTAAYC 196
            + +         Y  T      EY+      +   W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN---------YAAT------EYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V      GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]

BLAST of MC06g1552 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 82/217 (37.79%), Postives = 108/217 (49.77%), Query Frame = 0


Query: 17  AEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+LAFV+ A     A   N+Y YAK  SGPLK  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAPEVARSVASEVRRSGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A+S   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLPVFPHVAQAILPTAAYC 196
            + +         Y  T      EY+      +   W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN---------YAAT------EYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V      GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

The following BLAST results are available for this feature:

BLAST of MC06g1552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA63	2.3e-80	63.03	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9SW70	1.3e-70	59.13	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
A2Y0H2	5.2e-56	52.97	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
Q9FRA7	5.2e-56	52.97	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
Q41112	2.4e-53	59.47	Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1	[more]

BLAST of MC06g1552 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146027.1	7.05e-168	100.00	REF/SRPP-like protein At3g05500 [Momordica charantia]	[more]
XP_023530281.1	2.55e-145	86.36	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
KAG6588484.1	3.62e-145	86.36	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223...	[more]
XP_008450634.1	3.62e-145	88.02	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]
XP_038879426.1	5.14e-145	87.60	REF/SRPP-like protein At3g05500 [Benincasa hispida]	[more]

BLAST of MC06g1552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYC3	3.41e-168	100.00	REF/SRPP-like protein At3g05500 OS=Momordica charantia OX=3673 GN=LOC111015336 P...	[more]
A0A1S3BP12	1.75e-145	88.02	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=...	[more]
A0A6J1F5J8	1.44e-144	85.95	REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE...	[more]
A0A6J1HXN7	2.04e-144	85.54	REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3...	[more]
A0A5D3CFW4	6.30e-143	90.43	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]

BLAST of MC06g1552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05500.1	1.7e-81	63.03	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	2.3e-46	43.89	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	1.5e-29	37.79	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	1.5e-29	37.79	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 17..231 e-value: 3.8E-91 score: 304.5
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 9..234
None	No IPR available	PANTHER	PTHR33732:SF9	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 9..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1552.1	MC06g1552.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet