MC06g1544 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1544
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	HIG1 domain-containing protein
Location	MC06: 22680187 .. 22681770 (+)
RNA-Seq Expression	MC06g1544
Synteny	MC06g1544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAATCTAAGGGCAAACTCGAATCCCTGAGGGAGTGGGTTTCCGAGCACAAGCTTCGTACCGTTGGTAATCAATCGTCTATTTCATCTTCTAATTTTCGTTTTGATTGTGCTTTTCGGCGGTTTGTGTTTCGATTTGTGGTCTAGTTGAGTTTTTGTTTAATTTTAATTGTTGTGTATCGTTTGGGGTGAAGGGTCTCTGTGGCTTAGCGGAATAGCGGGTTCTATTGCGTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCACGCTAGGTGAGTTTCTAATTTTGTGCTTAATTGTTGATGTTTTTGTTTCTTAATCCTAGAATTTGGAGTTCTGCTATAGTTCTGCATGTCAATGGAATTTTGATTCTAGAAGGGCCAAATGAATCGACCTTATTTGATGAAAGCCTGAAAAAACCATCCCTCTTTGGGGATCTTGCTGAGTTTTTAAATCTTAAGGATGTTTTGGAGCTATTTTGAGAAAACAAGTATCCTCCCCCCAATTTTGTTTGGAGAGATGTTTTGGGTGGCTTGGAACGGTTGAGATTGTTTGTATTTAATCATTATGTCCCTGATTTGGAGAGTAGAACAATTTTGATTTATCTCAAAAGAAAAGGGGAGAAAAAACAGCTATGAGAACATGTTTTTCTTTAATTTTTGTTCTAAAATCTGAAAACTGCATTTTGGAACAGCTTTCAAGCAGCTCTCAGTCCTTCTTCTCCCTCCTTGTATCTTTTTACGCTTGTTATATGATAGAATGCTTTGTTTTGATGATGAACACCAAAAACACTCTCATATTTTGTGATTTTTAATTGATTGAAAACACTTTAACATTTTTCACTATGTCCATATGATCAGAATTATTTTATGTGCATGTTAATCATCTCTCATCTATTCATTGTTTTTCAATGTCATGTAATAATTGAAGCGCATTGCATCTTTGATGCAACTCTGCTCGTTATCTCATTATTCAATATCCATGTTACTATCTTTACAATAATGGTTAATTATGGAATTTAATTTAAGTTTGAGGATTACAATTGAGATTTCAAACATAGAGGATTGGAAATAGAAAGGGGATAGACGTTCTAAGAAGGATCAGACTGAAAATTTGACAGAAGTTTGAGGAGTAAAATCATAGGCAGATGTATAGAACCTTTTAGATGGCTTAGGCTATGTGTGGGAGCGTTTTTGGGAAAATTCAGAGGCCCTCTATCACAAAGCACTTGTAAAGTACTTTTGGCTTAATACTCTTAGGGGCATAGAACCAACCATCAAAGTGATTAGTGATTATACTTAAAGTACTTTTTGCTATTAACAACTTATTTCTAAAACGCTCTTAGTAGATACACCTCGACATTGGCATCCTTTTCCATGCTTTTTTCTGTATGATATCTGATTCCAATGCGTTGCTTCTTCAAAATCACTGTCAGGTTACACGCACAGGCTCTTACCTTAGCCGCTCTTGCTGGTGCTGCTGTTGTTGAATACTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAGTTTCTTCCAATTGATAACTACTCACACAAGGAC

mRNA sequence

ATGGCCGAATCTAAGGGCAAACTCGAATCCCTGAGGGAGTGGGTTTCCGAGCACAAGCTTCGTACCGTTGGGTCTCTGTGGCTTAGCGGAATAGCGGGTTCTATTGCGTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCACGCTAGGTTACACGCACAGGCTCTTACCTTAGCCGCTCTTGCTGGTGCTGCTGTTGTTGAATACTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAGTTTCTTCCAATTGATAACTACTCACACAAGGAC

Coding sequence (CDS)

ATGGCCGAATCTAAGGGCAAACTCGAATCCCTGAGGGAGTGGGTTTCCGAGCACAAGCTTCGTACCGTTGGGTCTCTGTGGCTTAGCGGAATAGCGGGTTCTATTGCGTACAATTGGTCTCAACCTAATATGAAGACCAGCGTGAAGATCATCCACGCTAGGTTACACGCACAGGCTCTTACCTTAGCCGCTCTTGCTGGTGCTGCTGTTGTTGAATACTATGAACACAAATCAGGAGCAAAGGCGGAGCGATATGCCAAGTTTCTTCCAATTGATAACTACTCACACAAGGAC

Protein sequence

MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD

Homology

[Close]

BLAST of MC06g1544 vs. NCBI nr
Match: XP_022145879.1 (uncharacterized protein LOC111015231 [Momordica charantia])

HSP 1 Score: 196 bits (497), Expect = 5.92e-63
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. NCBI nr
Match: XP_022961523.1 (uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 uncharacterized protein LOC111779972 [Cucurbita pepo subsp. pepo] >KAG6590446.1 hypothetical protein SDJN03_15869, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195 bits (496), Expect = 8.42e-63
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLP+DNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. NCBI nr
Match: XP_022924720.1 (uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 uncharacterized protein LOC111469164 [Cucurbita maxima] >XP_023530300.1 uncharacterized protein LOC111792905 [Cucurbita pepo subsp. pepo] >KAG6588489.1 hypothetical protein SDJN03_17054, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022318.1 hypothetical protein SDJN02_16049 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192 bits (489), Expect = 9.84e-62
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of MC06g1544 vs. NCBI nr
Match: XP_022968827.1 (uncharacterized protein LOC111467946 [Cucurbita maxima])

HSP 1 Score: 192 bits (489), Expect = 9.84e-62
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. NCBI nr
Match: XP_004135606.1 (uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622.1 PREDICTED: uncharacterized protein LOC103492155 [Cucumis melo] >KAA0050906.1 HIG_1_N domain-containing protein [Cucumis melo var. makuwa] >KGN66059.1 hypothetical protein Csa_007690 [Cucumis sativus] >TYK10257.1 HIG_1_N domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (485), Expect = 4.01e-61
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE KGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAEPKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHK+
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKE 98

[Close]

BLAST of MC06g1544 vs. ExPASy TrEMBL
Match: A0A6J1CWJ8 (uncharacterized protein LOC111015231 OS=Momordica charantia OX=3673 GN=LOC111015231 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 2.87e-63
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. ExPASy TrEMBL
Match: A0A6J1HC22 (uncharacterized protein LOC111462074 OS=Cucurbita moschata OX=3662 GN=LOC111462074 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 4.07e-63
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLP+DNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. ExPASy TrEMBL
Match: A0A6J1HUL1 (uncharacterized protein LOC111467946 OS=Cucurbita maxima OX=3661 GN=LOC111467946 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.77e-62
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of MC06g1544 vs. ExPASy TrEMBL
Match: A0A6J1I284 (uncharacterized protein LOC111469164 OS=Cucurbita maxima OX=3661 GN=LOC111469164 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.77e-62
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of MC06g1544 vs. ExPASy TrEMBL
Match: A0A6J1EFV1 (uncharacterized protein LOC111432132 OS=Cucurbita moschata OX=3662 GN=LOC111432132 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.77e-62
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98
          TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of MC06g1544 vs. TAIR 10
Match: AT3G05550.1 (Hypoxia-responsive family protein )

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-38
Identity = 78/98 (79.59%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          M ESK K E +R+WVS+HKLRTVG LWLSGI GSIAYNWSQP MKTSVKIIHARLHAQAL
Sbjct: 1  MVESKTKFEEIRKWVSDHKLRTVGCLWLSGITGSIAYNWSQPAMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYY+HK+ A   RY KFLP +N SHKD
Sbjct: 61 TLAALAGAAVVEYYDHKTEA-TNRYPKFLPPENLSHKD 97

[Close]

BLAST of MC06g1544 vs. TAIR 10
Match: AT5G27760.1 (Hypoxia-responsive family protein )

HSP 1 Score: 140.6 bits (353), Expect = 6.8e-34
Identity = 71/93 (76.34%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE K K+  +REW+ EHKLRTVG LWLSGI+GSIAYNWS+P MKTSV+IIHARLHAQAL
Sbjct: 1  MAEPKTKVAEIREWIIEHKLRTVGCLWLSGISGSIAYNWSKPAMKTSVRIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDN 94
          TLAALAGAA VEYY+HKSGA  +R  KFL  DN
Sbjct: 61 TLAALAGAAAVEYYDHKSGA-TDRIPKFLKPDN 92

The following BLAST results are available for this feature:

BLAST of MC06g1544 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145879.1	5.92e-63	100.00	uncharacterized protein LOC111015231 [Momordica charantia]	[more]
XP_022961523.1	8.42e-63	98.98	uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 unchar...	[more]
XP_022924720.1	9.84e-62	98.98	uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 unchar...	[more]
XP_022968827.1	9.84e-62	97.96	uncharacterized protein LOC111467946 [Cucurbita maxima]	[more]
XP_004135606.1	4.01e-61	96.94	uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622.1 PREDICTED...	[more]

BLAST of MC06g1544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWJ8	2.87e-63	100.00	uncharacterized protein LOC111015231 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1HC22	4.07e-63	98.98	uncharacterized protein LOC111462074 OS=Cucurbita moschata OX=3662 GN=LOC1114620...	[more]
A0A6J1HUL1	4.77e-62	97.96	uncharacterized protein LOC111467946 OS=Cucurbita maxima OX=3661 GN=LOC111467946...	[more]
A0A6J1I284	4.77e-62	98.98	uncharacterized protein LOC111469164 OS=Cucurbita maxima OX=3661 GN=LOC111469164...	[more]
A0A6J1EFV1	4.77e-62	98.98	uncharacterized protein LOC111432132 OS=Cucurbita moschata OX=3662 GN=LOC1114321...	[more]

BLAST of MC06g1544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05550.1	5.9e-38	79.59	Hypoxia-responsive family protein	[more]
AT5G27760.1	6.8e-34	76.34	Hypoxia-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007667	Hypoxia induced protein, domain	PFAM	PF04588	HIG_1_N	coord: 17..67 e-value: 3.6E-10 score: 39.9
IPR007667	Hypoxia induced protein, domain	PROSITE	PS51503	HIG1	coord: 1..83 score: 21.037001
None	No IPR available	GENE3D	6.10.140.1320		coord: 20..78 e-value: 1.5E-7 score: 33.1
None	No IPR available	PANTHER	PTHR28018:SF7	HYPOXIA-RESPONSIVE FAMILY PROTEIN-RELATED	coord: 4..98
IPR040153	Respiratory supercomplex factor 2, mitochondrial	PANTHER	PTHR28018	RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1544.1	MC06g1544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005746	mitochondrial respirasome