MC06g1532 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1532
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOB domain-containing protein 16-like
LocationMC06: 22582221 .. 22583517 (+)
RNA-Seq ExpressionMC06g1532
SyntenyMC06g1532
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTATGCTTTAAACCCAGACCCGCACGCCCTCCCTCTAACTTATACATTTTTGCACTTTTTTCTACTCTCCTCGTGCGCTGAATCCTTCTTCTTCTTCTTCTTTCTCTTTCAATTCCATGGCGTCTTCTAGCACTGGAAATTACAATAATAGTGTCTCCGGATCTTCCCCTTGTGGAGCATGCAAGTTTCTGAGGCGAAAATGTGTGGCCGATTGCATTTTTGCCCCTTACTTTTGCTCGGAGCAAGGCCCTGCAAGATTCGCGGCCATTCACAAGGTGTTCGGCGCTAGCAATGTTTCCAAGTTGCTTCTCCACGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACTATTGCGTATGAAGCTCAGGCCAGGATTCGAGATCCTGTTTATGGCTGTGTGGCTCATATTTTTGCTCTCCAACAACAGGTCTGATTTTTCTTCCAAAATTTGGCTTTTTTTTTTAGTTTTCTTCATCTGGGTTTGTTTAGTTAGTGAAGAAAAGAAACTAAAGATTGGTTTTTTTTTGAAGGTGGCATACTTGCAAACACAGCTGATGCAAGCCAAGGCTCAACTGGCTCAAACCCTAATCGATTCAGAAGGAAATTACATGGAGAAGAGCTCCAATCTCCCCACCGGATCATTCCCAAATTTCCCACAGAGCTCTCTGGAATCGGCTGCCAATAGCGATGAGGCAATAATGATGAACAATTTTCAGGAGGAGAGCCAAAGCAGATCACCAGAAGAATTAGCTCATCAGTTTCAACAATTTTCTAGAAAAAGATTAGCTTGTCATGGTGATGTGGGGGAGCTCCAAGCTTTGGCCCTTAGAATGATGAGAAACTAAATTCTATGAATAATTTTCCCTTGCTATGCTATACCTTCCAATTTGTCTCTCTATGATTAACCAAGAACAGTAATAATTCATTGAGATTGGACCATGATGGATTGGTTGGTTGCAAGTTGAGGGCAGAATAGATAATTTTGTCTTTGATGTAACTCGAAAAAATGGGGAAAAAAAGGGGAAAAAAGTAGCTTTGGGATGTGGAGTTTAGGGTTGACATAAAACGGGTGTGGGCGTGGGATAAAAGTTGATCCCAATTAACATAGGGATTGGGGGAAAGGGTGAAAATTGAATTCCATGATTGTAAATTATAGACAAAACACACACGAGGTTGCCATCGAGTGGACCCTTCTTGTTGAGGGTTTTACAATATATATGATGGAGTGTAATAATTAGGTGCACCTATACCTTTATTTTGGTGTCCCCATTTAAACTAAGTTTGAAACTAATCCC

mRNA sequence

TGTATGCTTTAAACCCAGACCCGCACGCCCTCCCTCTAACTTATACATTTTTGCACTTTTTTCTACTCTCCTCGTGCGCTGAATCCTTCTTCTTCTTCTTCTTTCTCTTTCAATTCCATGGCGTCTTCTAGCACTGGAAATTACAATAATAGTGTCTCCGGATCTTCCCCTTGTGGAGCATGCAAGTTTCTGAGGCGAAAATGTGTGGCCGATTGCATTTTTGCCCCTTACTTTTGCTCGGAGCAAGGCCCTGCAAGATTCGCGGCCATTCACAAGGTGTTCGGCGCTAGCAATGTTTCCAAGTTGCTTCTCCACGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACTATTGCGTATGAAGCTCAGGCCAGGATTCGAGATCCTGTTTATGGCTGTGTGGCTCATATTTTTGCTCTCCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCAAGCCAAGGCTCAACTGGCTCAAACCCTAATCGATTCAGAAGGAAATTACATGGAGAAGAGCTCCAATCTCCCCACCGGATCATTCCCAAATTTCCCACAGAGCTCTCTGGAATCGGCTGCCAATAGCGATGAGGCAATAATGATGAACAATTTTCAGGAGGAGAGCCAAAGCAGATCACCAGAAGAATTAGCTCATCAGTTTCAACAATTTTCTAGAAAAAGATTAGCTTGTCATGGTGATGTGGGGGAGCTCCAAGCTTTGGCCCTTAGAATGATGAGAAACTAAATTCTATGAATAATTTTCCCTTGCTATGCTATACCTTCCAATTTGTCTCTCTATGATTAACCAAGAACAGTAATAATTCATTGAGATTGGACCATGATGGATTGGTTGGTTGCAAGTTGAGGGCAGAATAGATAATTTTGTCTTTGATGTAACTCGAAAAAATGGGGAAAAAAAGGGGAAAAAAGTAGCTTTGGGATGTGGAGTTTAGGGTTGACATAAAACGGGTGTGGGCGTGGGATAAAAGTTGATCCCAATTAACATAGGGATTGGGGGAAAGGGTGAAAATTGAATTCCATGATTGTAAATTATAGACAAAACACACACGAGGTTGCCATCGAGTGGACCCTTCTTGTTGAGGGTTTTACAATATATATGATGGAGTGTAATAATTAGGTGCACCTATACCTTTATTTTGGTGTCCCCATTTAAACTAAGTTTGAAACTAATCCC

Coding sequence (CDS)

ATGGCGTCTTCTAGCACTGGAAATTACAATAATAGTGTCTCCGGATCTTCCCCTTGTGGAGCATGCAAGTTTCTGAGGCGAAAATGTGTGGCCGATTGCATTTTTGCCCCTTACTTTTGCTCGGAGCAAGGCCCTGCAAGATTCGCGGCCATTCACAAGGTGTTCGGCGCTAGCAATGTTTCCAAGTTGCTTCTCCACGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACTATTGCGTATGAAGCTCAGGCCAGGATTCGAGATCCTGTTTATGGCTGTGTGGCTCATATTTTTGCTCTCCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCAAGCCAAGGCTCAACTGGCTCAAACCCTAATCGATTCAGAAGGAAATTACATGGAGAAGAGCTCCAATCTCCCCACCGGATCATTCCCAAATTTCCCACAGAGCTCTCTGGAATCGGCTGCCAATAGCGATGAGGCAATAATGATGAACAATTTTCAGGAGGAGAGCCAAAGCAGATCACCAGAAGAATTAGCTCATCAGTTTCAACAATTTTCTAGAAAAAGATTAGCTTGTCATGGTGATGTGGGGGAGCTCCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

Protein sequence

MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQFQQFSRKRLACHGDVGELQALALRMMRN
Homology
BLAST of MC06g1532 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-49
Identity = 129/248 (52.02%), Postives = 151/248 (60.89%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60
           MASS  G    +    SPCGACKFLRRKC +DCIFAPYF SEQG ARFAAIHKVFGASNV
Sbjct: 1   MASSGNG---TTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNV 60

Query: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120
           SKLLL+VP+ DRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A
Sbjct: 61  SKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 120

Query: 121 --QTLIDSEGNYMEKSSN----------LPTGSF-------------------PNFPQSS 180
             QT    +  +  +S+N           P GS                    P  PQSS
Sbjct: 121 GHQTSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSS 180

Query: 181 LESAAN--SDEAIMMNNFQEESQSRSPEELAHQFQQF-----SRKRLA--CHGDVGELQA 209
           LE + +  S +     N +E           H    F     ++KR    C  D+GELQA
Sbjct: 181 LEESFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQA 240

BLAST of MC06g1532 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.1e-41
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 0

Query: 10  NNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPV 69
           ++S S  SPCGACKFLRRKC   C+FAPYFC EQG + FAAIHKVFGASN SKLL H+P+
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 70  PDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLIDSEGN 129
            DRCEA +TI+YEAQAR++DP+YGCV+HIFALQQQV  LQ +L   K Q AQ++I ++  
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS- 122

Query: 130 YMEKSSNLPTGSFPN 145
                   PT   PN
Sbjct: 123 --------PTSENPN 128

BLAST of MC06g1532 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.3e-41
Identity = 85/125 (68.00%), Postives = 96/125 (76.80%), Query Frame = 0

Query: 17  SPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRCEAV 76
           SPCGACKFLRRKCV  C+FAPYFC EQG A FAAIHKVFGASNVSKLL H+P+ DR EA 
Sbjct: 6   SPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAA 65

Query: 77  VTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTL------IDSEGNY 136
           VTI+YEAQAR+RDP+YGCVAHIFALQQQV  LQ QL   KA  AQ +        ++G Y
Sbjct: 66  VTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGATTKGGY 125

BLAST of MC06g1532 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-40
Identity = 84/117 (71.79%), Postives = 93/117 (79.49%), Query Frame = 0

Query: 4   SSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKL 63
           SS G  ++   G  PCGACKFLRRKCV  CIFAPYF SEQG A FAA+HKVFGASNVSKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 64  LLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 121
           LLH+PV  R +AVVTI YEAQARIRDP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of MC06g1532 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 106/211 (50.24%), Postives = 131/211 (62.09%), Query Frame = 0

Query: 4   SSTGN-YNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSK 63
           SS+GN  ++S  G  PCGACKFLRRKCVA CIFAPYF SEQG A FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 64  LLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA-- 123
           LL HVP   R +AVV+I +EAQAR+RDP+YGCV+HI +LQQQV  LQT+L   +A LA  
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATL 121

Query: 124 --------QTLIDSEGNYMEKS-SNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQS 183
                   Q  + S G+    S ++LPT S   +  SS+       E +M + +  + Q 
Sbjct: 122 ELPQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSI------FEPVMSSTWAMQQQP 181

Query: 184 RSPEELAHQFQQFSRKRLACHGDVGELQALA 203
           R  + L      F     +  G  GELQALA
Sbjct: 182 RPSDHL------FGVPSSSNMGGGGELQALA 200

BLAST of MC06g1532 vs. NCBI nr
Match: XP_022146014.1 (LOB domain-containing protein 16-like [Momordica charantia])

HSP 1 Score: 405 bits (1040), Expect = 3.53e-142
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60
           MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV
Sbjct: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60

Query: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120
           SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA
Sbjct: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120

Query: 121 QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ 180
           QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ
Sbjct: 121 QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ 180

Query: 181 FQQFSRKRLACHGDVGELQALALRMMRN 208
           FQQFSRKRLACHGDVGELQALALRMMRN
Sbjct: 181 FQQFSRKRLACHGDVGELQALALRMMRN 208

BLAST of MC06g1532 vs. NCBI nr
Match: XP_008461877.1 (PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 2.66e-88
Identity = 165/238 (69.33%), Postives = 177/238 (74.37%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSG-------SSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHK 60
           MASSS+ + N SVSG        SPCGACKFLRRKCVADCIFAPYFCSEQG ARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLESAAN 180
           QAKAQLAQTL+DS G+ ME        +SNL  GS PN            PQSSLESAAN
Sbjct: 121 QAKAQLAQTLMDS-GSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAAN 180

Query: 181 SDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRLAC-HGDVGELQALALRMMRN 208
           +DEA++  N    F E   SRS +E     Q F RK+L+  H D+GEL ALALRMMRN
Sbjct: 181 NDEALLFINQNQLFHESQLSRSSQE-PQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of MC06g1532 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 262 bits (669), Expect = 3.44e-85
Identity = 162/243 (66.67%), Postives = 175/243 (72.02%), Query Frame = 0

Query: 1   MASSST--------GNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIH 60
           MASSS+        G+     SG SPCGACKFLRRKCVADCIFAPYFCSEQG ARFAAIH
Sbjct: 1   MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60

Query: 61  KVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQL 120
           KVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120

Query: 121 MQAKAQLAQTLIDSEGN----YMEKSSNLPTGSFPN-----------------FPQSSLE 180
           MQAKAQLAQTL+DS GN    + E  +N  +   PN                  PQSSLE
Sbjct: 121 MQAKAQLAQTLMDSRGNMEIQWTENFNNNLSNGIPNNFQNNYQTQIMNNNPAVSPQSSLE 180

Query: 181 SAANSDEAIM----MNNFQEESQSRSPEELAHQFQQFSRKRLACHG--DVGELQALALRM 208
           SAAN+DEA++    ++NF E SQSRSPEE     Q F  K+L      D+GELQALALRM
Sbjct: 181 SAANNDEALLFINQIHNFHE-SQSRSPEESQF-LQPFPTKKLPSSHVHDLGELQALALRM 240

BLAST of MC06g1532 vs. NCBI nr
Match: XP_004152037.2 (LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 261 bits (666), Expect = 9.82e-85
Identity = 160/243 (65.84%), Postives = 176/243 (72.43%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGS-----------SPCGACKFLRRKCVADCIFAPYFCSEQGPARFA 60
           MASSS+ + N S+SG            SPCGACKFLRRKCVADCIFAPYFCSEQG ARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMQAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLE 180
           TQLM AKAQLA+TL+DS G+ ME        ++NL  GS P+            PQSSLE
Sbjct: 121 TQLMHAKAQLAETLMDS-GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLE 180

Query: 181 SAANSDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRL--ACHGDVGELQALALRM 208
           SAAN+DEA++  N    F E   SRS +E     Q F RK+L  + H D+GEL ALALRM
Sbjct: 181 SAANNDEALLFINQNQLFHESQLSRSSQEPQF-LQPFPRKKLPSSSHADLGELHALALRM 240

BLAST of MC06g1532 vs. NCBI nr
Match: KAE8650674.1 (hypothetical protein Csa_009642 [Cucumis sativus])

HSP 1 Score: 261 bits (666), Expect = 5.53e-84
Identity = 160/243 (65.84%), Postives = 176/243 (72.43%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGS-----------SPCGACKFLRRKCVADCIFAPYFCSEQGPARFA 60
           MASSS+ + N S+SG            SPCGACKFLRRKCVADCIFAPYFCSEQG ARFA
Sbjct: 54  MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 113

Query: 61  AIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 114 AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 173

Query: 121 TQLMQAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLE 180
           TQLM AKAQLA+TL+DS G+ ME        ++NL  GS P+            PQSSLE
Sbjct: 174 TQLMHAKAQLAETLMDS-GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLE 233

Query: 181 SAANSDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRL--ACHGDVGELQALALRM 208
           SAAN+DEA++  N    F E   SRS +E     Q F RK+L  + H D+GEL ALALRM
Sbjct: 234 SAANNDEALLFINQNQLFHESQLSRSSQEPQF-LQPFPRKKLPSSSHADLGELHALALRM 293

BLAST of MC06g1532 vs. ExPASy TrEMBL
Match: A0A6J1CWX3 (LOB domain-containing protein 16-like OS=Momordica charantia OX=3673 GN=LOC111015325 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 1.71e-142
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60
           MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV
Sbjct: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60

Query: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120
           SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA
Sbjct: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120

Query: 121 QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ 180
           QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ
Sbjct: 121 QTLIDSEGNYMEKSSNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQSRSPEELAHQ 180

Query: 181 FQQFSRKRLACHGDVGELQALALRMMRN 208
           FQQFSRKRLACHGDVGELQALALRMMRN
Sbjct: 181 FQQFSRKRLACHGDVGELQALALRMMRN 208

BLAST of MC06g1532 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 270 bits (689), Expect = 1.29e-88
Identity = 165/238 (69.33%), Postives = 177/238 (74.37%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSG-------SSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHK 60
           MASSS+ + N SVSG        SPCGACKFLRRKCVADCIFAPYFCSEQG ARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLESAAN 180
           QAKAQLAQTL+DS G+ ME        +SNL  GS PN            PQSSLESAAN
Sbjct: 121 QAKAQLAQTLMDS-GSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAAN 180

Query: 181 SDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRLAC-HGDVGELQALALRMMRN 208
           +DEA++  N    F E   SRS +E     Q F RK+L+  H D+GEL ALALRMMRN
Sbjct: 181 NDEALLFINQNQLFHESQLSRSSQE-PQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of MC06g1532 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 270 bits (689), Expect = 1.29e-88
Identity = 165/238 (69.33%), Postives = 177/238 (74.37%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSG-------SSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHK 60
           MASSS+ + N SVSG        SPCGACKFLRRKCVADCIFAPYFCSEQG ARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 61  VFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLM 120
           VFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 121 QAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLESAAN 180
           QAKAQLAQTL+DS G+ ME        +SNL  GS PN            PQSSLESAAN
Sbjct: 121 QAKAQLAQTLMDS-GSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLESAAN 180

Query: 181 SDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRLAC-HGDVGELQALALRMMRN 208
           +DEA++  N    F E   SRS +E     Q F RK+L+  H D+GEL ALALRMMRN
Sbjct: 181 NDEALLFINQNQLFHESQLSRSSQE-PQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of MC06g1532 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 261 bits (666), Expect = 4.75e-85
Identity = 160/243 (65.84%), Postives = 176/243 (72.43%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGS-----------SPCGACKFLRRKCVADCIFAPYFCSEQGPARFA 60
           MASSS+ + N S+SG            SPCGACKFLRRKCVADCIFAPYFCSEQG ARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMQAKAQLAQTLIDSEGNYME-------KSSNLPTGSFPN-----------FPQSSLE 180
           TQLM AKAQLA+TL+DS G+ ME        ++NL  GS P+            PQSSLE
Sbjct: 121 TQLMHAKAQLAETLMDS-GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLE 180

Query: 181 SAANSDEAIMMNN----FQEESQSRSPEELAHQFQQFSRKRL--ACHGDVGELQALALRM 208
           SAAN+DEA++  N    F E   SRS +E     Q F RK+L  + H D+GEL ALALRM
Sbjct: 181 SAANNDEALLFINQNQLFHESQLSRSSQEPQF-LQPFPRKKLPSSSHADLGELHALALRM 240

BLAST of MC06g1532 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 255 bits (651), Expect = 5.49e-83
Identity = 152/234 (64.96%), Postives = 170/234 (72.65%), Query Frame = 0

Query: 2   ASSSTGNYNNSVSGS------------SPCGACKFLRRKCVADCIFAPYFCSEQGPARFA 61
           +SSS+   N+SVSG             SPCGACKFLRRKCVA+CIFAPYF SEQG ARFA
Sbjct: 4   SSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFA 63

Query: 62  AIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQ 121
           A+HKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 64  AVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQ 123

Query: 122 TQLMQAKAQLAQTLIDSEGNYMEK-----SSNLPTGSFPNF----------PQSSLESAA 181
            QLMQAKAQLAQTL+DS GN   +     ++NL  G   N+          PQSS+ESAA
Sbjct: 124 AQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAA 183

Query: 182 NSDEAIMMNNFQEESQSRSPEELAHQFQQFSRKRLACHGDVGELQALALRMMRN 208
           N+D A+M  N  +ESQ+     LA       R+  +CHGD+GELQALALRMMRN
Sbjct: 184 NNDAALMFMNHYQESQT-----LAR------RRSASCHGDLGELQALALRMMRN 226

BLAST of MC06g1532 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50
Identity = 129/248 (52.02%), Postives = 151/248 (60.89%), Query Frame = 0

Query: 1   MASSSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNV 60
           MASS  G    +    SPCGACKFLRRKC +DCIFAPYF SEQG ARFAAIHKVFGASNV
Sbjct: 1   MASSGNG---TTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNV 60

Query: 61  SKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 120
           SKLLL+VP+ DRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A
Sbjct: 61  SKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 120

Query: 121 --QTLIDSEGNYMEKSSN----------LPTGSF-------------------PNFPQSS 180
             QT    +  +  +S+N           P GS                    P  PQSS
Sbjct: 121 GHQTSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSS 180

Query: 181 LESAAN--SDEAIMMNNFQEESQSRSPEELAHQFQQF-----SRKRLA--CHGDVGELQA 209
           LE + +  S +     N +E           H    F     ++KR    C  D+GELQA
Sbjct: 181 LEESFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQA 240

BLAST of MC06g1532 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-42
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 0

Query: 10  NNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPV 69
           ++S S  SPCGACKFLRRKC   C+FAPYFC EQG + FAAIHKVFGASN SKLL H+P+
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 70  PDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLIDSEGN 129
            DRCEA +TI+YEAQAR++DP+YGCV+HIFALQQQV  LQ +L   K Q AQ++I ++  
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS- 122

Query: 130 YMEKSSNLPTGSFPN 145
                   PT   PN
Sbjct: 123 --------PTSENPN 128

BLAST of MC06g1532 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-41
Identity = 84/117 (71.79%), Postives = 93/117 (79.49%), Query Frame = 0

Query: 4   SSTGNYNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKL 63
           SS G  ++   G  PCGACKFLRRKCV  CIFAPYF SEQG A FAA+HKVFGASNVSKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 64  LLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 121
           LLH+PV  R +AVVTI YEAQARIRDP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of MC06g1532 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.9e-40
Identity = 106/211 (50.24%), Postives = 131/211 (62.09%), Query Frame = 0

Query: 4   SSTGN-YNNSVSGSSPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSK 63
           SS+GN  ++S  G  PCGACKFLRRKCVA CIFAPYF SEQG A FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 64  LLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA-- 123
           LL HVP   R +AVV+I +EAQAR+RDP+YGCV+HI +LQQQV  LQT+L   +A LA  
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATL 121

Query: 124 --------QTLIDSEGNYMEKS-SNLPTGSFPNFPQSSLESAANSDEAIMMNNFQEESQS 183
                   Q  + S G+    S ++LPT S   +  SS+       E +M + +  + Q 
Sbjct: 122 ELPQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSI------FEPVMSSTWAMQQQP 181

Query: 184 RSPEELAHQFQQFSRKRLACHGDVGELQALA 203
           R  + L      F     +  G  GELQALA
Sbjct: 182 RPSDHL------FGVPSSSNMGGGGELQALA 200

BLAST of MC06g1532 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 0

Query: 17  SPCGACKFLRRKCVADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRCEAV 76
           SPCGACKFLRR+CV  C+FAPYFC EQG + FAAIH+VFGASN SKLL H+P+ DR EA 
Sbjct: 6   SPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRREAA 65

Query: 77  VTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLI------------ 136
            TI YEAQAR +DP+YGCV+HIF+LQQQV  LQTQL   K Q  Q+++            
Sbjct: 66  TTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDSPSIENPNY 125

Query: 137 --DSEGNYMEKSSNLPTGSFPNFPQSSLESAANSD 158
             D++  Y+++S +L      +   S+ ++  NSD
Sbjct: 126 YQDTKPQYLQESHDL---HHHHLTTSNCQTEQNSD 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SLB71.8e-4952.02LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
Q9M2J74.1e-4161.48LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
Q5UG135.3e-4168.00LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
O221314.5e-4071.79LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
O813231.1e-3850.24LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S... [more]
Match NameE-valueIdentityDescription
XP_022146014.13.53e-142100.00LOB domain-containing protein 16-like [Momordica charantia][more]
XP_008461877.12.66e-8869.33PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domai... [more]
XP_038888851.13.44e-8566.67LOB domain-containing protein 16-like [Benincasa hispida][more]
XP_004152037.29.82e-8565.84LOB domain-containing protein 16 [Cucumis sativus][more]
KAE8650674.15.53e-8465.84hypothetical protein Csa_009642 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1CWX31.71e-142100.00LOB domain-containing protein 16-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A5D3C5361.29e-8869.33LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CG761.29e-8869.33LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV... [more]
A0A0A0LAE84.75e-8565.84LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV... [more]
A0A6J1HWM75.49e-8364.96LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695... [more]
Match NameE-valueIdentityDescription
AT2G42430.11.3e-5052.02lateral organ boundaries-domain 16 [more]
AT3G58190.12.9e-4261.48lateral organ boundaries-domain 29 [more]
AT2G45420.13.2e-4171.79LOB domain-containing protein 18 [more]
AT4G00220.17.9e-4050.24Lateral organ boundaries (LOB) domain family protein [more]
AT2G42440.11.3e-3752.90Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 18..116
e-value: 1.2E-36
score: 125.3
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 17..119
score: 22.809698
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 1..207
NoneNo IPR availablePANTHERPTHR31529:SF23LOB DOMAIN-CONTAINING PROTEIN 16coord: 1..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1532.1MC06g1532.1mRNA