MC06g1525 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1525
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 22529138 .. 22529437 (-)
RNA-Seq ExpressionMC06g1525
SyntenyMC06g1525
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCAAATTTGGTCTCTTTTTGGCCATTGTGCTTCTTCTTGCCGCCACTCAACGGCGGGAAGCTTGCAGATTAATGAAAGAGGAGCGGCGGCGGCAGCAGTGGCAGACGGCGGCTGTGGTGCTTCAGCAGTCGCTGCAGAGGGCGCCGGTTCCTCCCTCTGGGAGAAATGGAGACACCACTATTCCGGTGCCGGTCCGGCAAAGGGCTTTTGCCGGAAAATCCACGGCGGCGCCGGCAAACGCCTACCAAGACCATGTCATGGTTCCTAATTCTGGTGTGGCCTTGAACACAAAT

mRNA sequence

ATGAAGATCAAATTTGGTCTCTTTTTGGCCATTGTGCTTCTTCTTGCCGCCACTCAACGGCGGGAAGCTTGCAGATTAATGAAAGAGGAGCGGCGGCGGCAGCAGTGGCAGACGGCGGCTGTGGTGCTTCAGCAGTCGCTGCAGAGGGCGCCGGTTCCTCCCTCTGGGAGAAATGGAGACACCACTATTCCGGTGCCGGTCCGGCAAAGGGCTTTTGCCGGAAAATCCACGGCGGCGCCGGCAAACGCCTACCAAGACCATGTCATGGTTCCTAATTCTGGTGTGGCCTTGAACACAAAT

Coding sequence (CDS)

ATGAAGATCAAATTTGGTCTCTTTTTGGCCATTGTGCTTCTTCTTGCCGCCACTCAACGGCGGGAAGCTTGCAGATTAATGAAAGAGGAGCGGCGGCGGCAGCAGTGGCAGACGGCGGCTGTGGTGCTTCAGCAGTCGCTGCAGAGGGCGCCGGTTCCTCCCTCTGGGAGAAATGGAGACACCACTATTCCGGTGCCGGTCCGGCAAAGGGCTTTTGCCGGAAAATCCACGGCGGCGCCGGCAAACGCCTACCAAGACCATGTCATGGTTCCTAATTCTGGTGTGGCCTTGAACACAAAT

Protein sequence

MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGDTTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN
Homology
BLAST of MC06g1525 vs. NCBI nr
Match: KAG6571506.1 (hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106 bits (264), Expect = 1.88e-27
Identity = 60/100 (60.00%), Postives = 79/100 (79.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F   LAI L+LA   + ++CR+MK ++  Q+W   ++VLQQSLQRAPVPPSG++G 
Sbjct: 1   MKIQFAFILAIFLVLANVHQLQSCRIMKVDQ--QKW---SMVLQQSLQRAPVPPSGKDGG 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           TTIPVP+ +RAFAGK  A PA+AY DH+++P SGVALNTN
Sbjct: 61  TTIPVPLGERAFAGKFMAPPADAYPDHLLIP-SGVALNTN 94

BLAST of MC06g1525 vs. NCBI nr
Match: KAG6571505.1 (hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (249), Expect = 3.61e-25
Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F   LAIV+LLA   + ++CR MK++R  Q+W   +++LQQSLQRAPVPPS +NG 
Sbjct: 1   MKIQFAFLLAIVVLLANAHQLQSCRTMKDDR--QKW---SILLQQSLQRAPVPPSAKNGG 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           TTIPVP+ QRAF GKST +PA++Y   V VP  GVA+ TN
Sbjct: 61  TTIPVPLGQRAFVGKSTPSPAHSYHHQVPVP-FGVAMKTN 94

BLAST of MC06g1525 vs. NCBI nr
Match: KAG6571503.1 (hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 7.48e-25
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F   LAI+++LA   + ++CR MKE+R  Q+W  + ++LQQSLQRAPVPPS +NG 
Sbjct: 1   MKIQFAFLLAILVVLANAHQLQSCRTMKEDR--QKW--SILLLQQSLQRAPVPPSAKNGG 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           TTIPVP+ QR+F GKST +PA++Y   V VP  GVA+NTN
Sbjct: 61  TTIPVPLGQRSFVGKSTPSPAHSYHHQVPVP-FGVAMNTN 95

BLAST of MC06g1525 vs. NCBI nr
Match: KAA0025373.1 (hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa] >TYJ95702.1 hypothetical protein E5676_scaffold63958G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 2.14e-22
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F  F AI++LLA     ++CR MK+++R+  W   ++++QQSLQRAPVPPS R+GD
Sbjct: 1   MKIQFTFFFAILVLLANAHHLQSCRTMKDDQRK--W---SMLIQQSLQRAPVPPSTRDGD 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           T IPVP+ Q+AFAGKST  PA    D++ VP SGVAL TN
Sbjct: 61  TNIPVPLGQQAFAGKSTVPPAFPDPDNLEVP-SGVALKTN 94

BLAST of MC06g1525 vs. NCBI nr
Match: KAG6571501.1 (hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.8 bits (229), Expect = 4.07e-22
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F   LAI+++LA   + ++CR MKE+R  Q+W  + ++LQQSL+R PVPPS +NG 
Sbjct: 1   MKIQFAFLLAILVVLANAHQLQSCRTMKEDR--QKW--SILLLQQSLKRVPVPPSAQNGG 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           TTIP  + QRAF GKST +PA++Y   V VP  GVA+NTN
Sbjct: 61  TTIPTQLGQRAFVGKSTPSPAHSYHHQVPVP-FGVAMNTN 95

BLAST of MC06g1525 vs. ExPASy TrEMBL
Match: A0A5D3B777 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63958G00010 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.04e-22
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query: 1   MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
           MKI+F  F AI++LLA     ++CR MK+++R+  W   ++++QQSLQRAPVPPS R+GD
Sbjct: 1   MKIQFTFFFAILVLLANAHHLQSCRTMKDDQRK--W---SMLIQQSLQRAPVPPSTRDGD 60

Query: 61  TTIPVPVRQRAFAGKSTAAPANAYQDHVMVPNSGVALNTN 100
           T IPVP+ Q+AFAGKST  PA    D++ VP SGVAL TN
Sbjct: 61  TNIPVPLGQQAFAGKSTVPPAFPDPDNLEVP-SGVALKTN 94

BLAST of MC06g1525 vs. ExPASy TrEMBL
Match: A0A0A0LCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.44e-20
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 1  MKIKFGLFLAIVLLLAATQRREACRLMKEERRRQQWQTAAVVLQQSLQRAPVPPSGRNGD 60
          MKI+F   LAI++LLA T   ++CR +K+++  Q W     +LQQSLQR PVPPS +NGD
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQ--QNWSIDLQLLQQSLQRVPVPPSAKNGD 60

Query: 61 TTIPVPVRQRAFAGKSTAAPANAY 84
          T IPVPV QRAFAGK++AA A  Y
Sbjct: 61 TNIPVPVGQRAFAGKTSAALARNY 82

BLAST of MC06g1525 vs. ExPASy TrEMBL
Match: A0A7J7CYF4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00102 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.71e-06
Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 41 VVLQQSLQRAPVPPSGRNGDTTIP----VP-VRQRAFAGKSTAAPANAYQDHVMVPNSGV 98
          V++ QSLQR PV PSG NG T IP     P   QR FAG++ AAP NAY D++MVP  GV
Sbjct: 39 VLMLQSLQRGPVRPSGPNGCTYIPGRGGAPCTSQRGFAGRAVAAP-NAYPDNLMVP-FGV 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6571506.11.88e-2760.00hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6571505.13.61e-2558.00hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6571503.17.48e-2557.00hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0025373.12.14e-2256.00hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa] >TYJ957... [more]
KAG6571501.14.07e-2254.00hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3B7771.04e-2256.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LCY55.44e-2057.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1[more]
A0A7J7CYF41.71e-0657.14Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00102 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1525.1MC06g1525.1mRNA