MC06g1509 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1509
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Signal recognition particle 9 kDa protein
Location	MC06: 22383310 .. 22388730 (+)
RNA-Seq Expression	MC06g1509
Synteny	MC06g1509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAATTAGCGGTATGTTATCTTGCAACATTTTCATCTGGCGCTGGTGCCATTCGCACGCACGCGGCACGCGGGACGGGTTTATGTTCAGGTGTTACTCACACCACAGTAAGAGTAACGAAGCGAGCGATATTGGTTTCACCTCTCTATACGCAAAAATTCACAAGCTCTCTCTCTGTGTCGCGCCTGCTGCCGAGCCATGGTCTACATTACCTCGTGGGATGAATTCGTCGAGCGTTCTGTGCAGCTGTTCCGTTCCGATCCCAATTCAGTAAGTCATTCGTTCGAAATTCGATACCCTAGATATCGTTTTCTGTTTGATTACTGAGAAATTGATGTCACGAGATGAGAAAATCGATCGCATTGCTGTATTTTCATTCTTCAATCCCCTTCTTTACTGCTGAATTACATGTAACTGAGCAAATCAGCGCCACGGATTTGAATGGTATGAATTGAGCTTAGTCAATTGTGAAGGGCGTTCTAATTCATCGACTAAAATTTTAATTTCAATCTGACTATTTTGGTTTCTGTGACTACTTGCGATAGCGATCTAACAGTTTATTCGTATGTTTCCTTTATTGCCGCTTTCGTCATATTTTGGCTAATTCTAACTTCTACCACCGTTTTCCTTTTCAATCCAACTGGGAATATAGACGCGGTACAACATAAAGTATCGGCACTGCGATGGGAAACTGGTTCTTAAGGTCACTGATAACCGTGAGGTGAGGAATTATTTGTTGTATTCTTCATTAACGTCGTGTGTTTTCCTGATTAGTGATCAGGGTGGGAATTTTGATTATTGACTTCCAACTATATGCATGGCTATGTGGTTCACGTGGCAAACTCTTGGCCTTATGGATATTATACGCCAATGTTTGAAGATGCGTTTGAGTCTTTGATGCTCCTATACCTAAGTAGACTCGTGATCCAGTTTTCGTTCAATCTATGCTTCTCTGAAACTCTGCTTTATCGTTATATAATTTGGATGCCACTATTTTATGCAACCACGAGCTATTAATCTATAAATCAGGACTTGTACAATTATATTTAGTCACTAGTCTGAACCAAAATTTTCACCAATTTTATCAGTTCATTTCATTATATTGACTGAAGATATCACTTCATCATTCTAGCGCTGTAGAAGATTATGATCATCATCATTCATAATCATTTTATGCAACCACGTACCCTCATGATAAACCCAGACAATGAAACGATTTTGTATTGAAATGAAGCTCTGGAAGTTAACCAATTGGCATAAGGTTCTATGTTGAATCCTTATCATCATCAAGATTGTAAATGATTGGAAGGCCCTTTTGATTTAGTTTTTCTTGGGTGGGTTCCCTCTACCCCCGGCATCTAGGTTGTTCCCCCCTCCTCTTTCAAGTTTTTTTTAATATATTCTGTCTCTTATCTTAAAAAAAAAACAGTATCCTCATCAGGATAGTAATTTTTATCTTTTTTTAGAAGCATAAGATCTACTAATTTCCCTTTTTTCTTTTCCCCCCTATTCTCCAGTGTCTCAAGTTCAAGACAGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGGTATTATTCTTTGAATTTCTCTTTATTAATGGAGCATCTGAATATTCTGTTGAATAACAAACAAATAACCAGTTATTAATCACATGATTTTTTACTCAAATTTTGTTAAGATTTGAATCCTTGTTCTATTTGGATGACGTAAACTATAAATTCTCTAATTGCATGAAAGTCCCATATCCATATACTTGAAGGATGAGTTCACTTCCCTTCTGAATGCAGTTTTACTGTCTTGTGTCCGTGAATGAACATAGACCTGCTTGCCAACTGTCTAAAATTCGCCAAAATGGTTCATGGTGTGCCTGTAGTTCTCACTCCAACTATGATCCAAAAATGCACCTAGCATCCATGGACCATCTTTTTGATATATCCAGGATGGCAGCATATGAATGCTCCAACATGTATAACTAATGTGCACTCAGTTCTACTGATTGGAATTCTCTTATATTTTTGCCTTTTTCTCTTTTGTGAAGTGGATATATCAGAAGTGACGGGCAAAGAACAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGACTTTTCATTGACTACTTCACTAATAGGTTTCACGTACTTCTCTAAACCCATTGATGAGTTATAATCTTTATCTACATGATTTCAGTTAATATTATCGTCTTACTTTTATCAGAGTCAAATAGATTACTAAAGTTCTGCAATGAATTTACCGTATGCTGTTCCCATTTTTCCTAAAAAATTTTGGTGTCTAGTTCTTCTTCTATATTGAGAAACATTTTCACAAGTTTCCACCTCATTACACCGATTTGCTACTATACTTACAGATGTGCTTTCATCTTAGGCCAAAACTTCATTGTATTTAGTTCAATGTAATTGAAGAAATTAACCACCATGGATTGTGGTCATTCAGGGACTTTAGGAGAATGGGTTTTAGCCCATAGTGTCCATTTACCTAGGATACCGCAATCCTACAAGTTTTCTAACAATCTAGGGTCCTAATACTCGTGGATGCAAAAGAAAAAAAATATTTAAGCAATTTGTGTTAGAGCAAGGTCAATGTATGAATGAATACAAGATATTGAATCATCATATGATATAAATTAATGATAACACAGAGACCTTAAGATTTTGTCAATGCTATCTAAATGAGTATTGTCCTGCTGCCATATAAACATGGAGAGGACTCTCTTGTCTATTTCAAATTTCTTTGAATTGTTTACATCTTTCATTGTTTATTACTTCAAATAAAATTCAATTTTGTAAGTAGTGTATTCATCGTTGTTTTTTTTTTTTTTGAGAGAATGTATTCATCGTTGTTGATTGCTTAGCGATCGTATTTTCTTTGATTATCTATTTTATATCAGAAAATCAACAAAAAAGTATTTGGTTGATCCAGAATTGTTAGAAGATGGCAGACATTGCTTTCTTGTGCCTCCTGATTTAGACTTATTAACATGCCTTGCACATCGGACCACTAGACAGCCTACTAAAACCACTTGAGTGCGTGCATATAAAAAAATTTCCCTAACAATGTTTTGGTCTTTAACAAGATGCTCCAACCATCCATTTCAGCTTTATCTTCAAATCTGCATAGATGGAAGGCACCTTCTTTAGTTGCTTTTGGGATGTCTTTCTGGGATTTGTTTCAATTGCTGGAATTTCACACGCCAAGGCAAAGTTTTTCTTATGTTGGAGCTGAACACGAGGTGTTATAGTTATAGATTTGAGTGTCTTCAGGATAGCTTTAGGATAAACATTTTTAGGGGAATCGTTTTTTCAACAAGTCCTTTGGGAAAAGAAAATAGTAGTTAAATGTTTTCTCAAAGAGCACTTGAAAGTTGAAAATGCTTCTGAGGTTTCTTTAAAATTAAAAAATTTTCAAAATTCTGCTTAATTTGTTTTTTTTTTTTAACAAGATACGAAAAATTTTTGATTAAATTTGTTAAAGTCAATTTTAAGATATTGGAAAACTATTTCAAATACACTGCTAGTATTCTGAAGTTGATCGAATTGTTCGGAAAAAATACTGAGAAGAATTATAATGGCTAACGCATTCTCCAAAAGATTCTTTGATGTATAACTTTGCAGTGGCACTTTATAAAAGATGGAAACTATTTCTTAATACTTTCAATGGTGCTATTCTCTCATAGAATCAATCCATGCATAACAAGATCTCTTTTCGTTGAAACTTGGGTATGTGGGTACCTAGGGTCTCCGTCTCATCTTTTTCATTGGCAACAACATTTTTGGGTTAGTTCATGGCTTTAAATTGTTGTAGTTATATATTAAGATGCTAAATATATGCTGCATCATATTAGTTGGAGTACATATAAATTGGTGTAAATATGTCGAGATAGACTTGATACTTAGACATATGACATTACTAAGCATACTCTGAGCGGGTGACAAACATTGGGGTAATCATTCCATCCATTGTTAGGTATATTCAAAATTTAAAAACTCAAACTCACTTTTGATGAGGCAGAAACACCACATCCTTCAACTTTGTTGCTTTTACCTTTGGTTCAAATCTAGGATTCTGTTCCCAAAAAGTACACATATTTTTCTTCTTTAGCATGTGATTTGTCAAGATTGAAGAAAGCTGTTTCAGTCACTGTCAAATGCAATCTTCTTGGCTGCACTAGCCAAGCAAAAACACCACCACTCTTTATTCTGTGGGAAGATAAAGTCTCCTTCCCATATTGGATTTATTATCCATCCATACAGAACTACTGGTTACTGAGTGTGGGCTGCAGTCTGAAGATTCCCTTAAAACAGATGATTATGAACATGATATTGTTGATATTTCAGGGCTTCCTGCTCAATGAAAATGCCACTTTTCCAGGCTTTGTACATTAATGCCCTTGGTCTCATTATCAACACAAAATTATTGATATGGAAGTTATTTGGCTCTCTCTCTACAGAAAATCAACTATAGGCAAATTGATTCCCAAGAAAAGCTAGAAGAAAGGGGTGGAAGATCGTTTGAAAATGAGTAGCTAAGATCTCGATTTAGACATGTATTTTGGCAGGGATGGTTAGATTAGAAAACTTTATGGTTGGAACCATCATCGATACTCAAAAATGTTCTTCAAAGATCCATAGCATTTCTTTTACAAGCCTTTTGGAAGGCCTCCATCTGTAATAACGATCGAACCTAGTCAAGTTAGATTGGTCTATCATCTATCTAGGTCATTTCCCTATATCGTCCCGATTTTATCGGAGGTCCCCGAAGGGACCGTCTAGGTCATTTAGATTGATTAAATCTACCATCCTGCATTTTAATCGAGACTAAAATGTCTCTTAGGCTAACCTAAGAATATTCATAAACACTTCTCTGACAACAGTATGTTTGATCAGAGTGATTATTTTTTTTTCTCCGTTTTCCAATAGCAATATGTCAACTGACTCGATCAATATAGATCTCAGAAGCTTCCAACTTCAATGAAAAATTCTTTGAAACTAGTTTTGCAATTTTTGGGAAAGTTTATGACTTTGTGGATTAAATCCAATGATATTGGAAGAAGGGTTAGATTGGATTCAAAGAATAGCAAGAAAGCCTCCATCTCTCTCTCTCTCAAACCTGTCCTGTCCAACCAAAATCCCAAACACCACCTTTTCCCTTTTGTTGGACCACTTTATTCAAAGGATTCAAAACAAAATGTTTAAATTCATGTGTCTCATTATCTTGTGAAGAAATTCAAACGTTGTATTGTATTTTTCTTTTTCTTTTTTTCCTTTTTCTTTTTTGCCTGTCAGTCAAAGTGAAGTTGTATTTCAATTTCTCACTAGTGGGGTGATATCCAATGCAAATTGAATTGGGG

mRNA sequence

CCTAATTAGCGGTATGTTATCTTGCAACATTTTCATCTGGCGCTGGTGCCATTCGCACGCACGCGGCACGCGGGACGGGTTTATGTTCAGGTGTTACTCACACCACAGTAAGAGTAACGAAGCGAGCGATATTGGTTTCACCTCTCTATACGCAAAAATTCACAAGCTCTCTCTCTGTGTCGCGCCTGCTGCCGAGCCATGGTCTACATTACCTCGTGGGATGAATTCGTCGAGCGTTCTGTGCAGCTGTTCCGTTCCGATCCCAATTCAACGCGGTACAACATAAAGTATCGGCACTGCGATGGGAAACTGGTTCTTAAGGTCACTGATAACCGTGAGTGTCTCAAGTTCAAGACAGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCAGAAGTGACGGGCAAAGAACAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGACTTTTCATTGACTACTTCACTAATAGAAAATCAACTATAGGCAAATTGATTCCCAAGAAAAGCTAGAAGAAAGGGGTGGAAGATCGTTTGAAAATGAGTAGCTAAGATCTCGATTTAGACATGTATTTTGGCAGGGATGGTTAGATTAGAAAACTTTATGGTTGGAACCATCATCGATACTCAAAAATGTTCTTCAAAGATCCATAGCATTTCTTTTACAAGCCTTTTGGAAGGCCTCCATCTGTAATAACGATCGAACCTAGTCAAGTTAGATTGGTCTATCATCTATCTAGGTCATTTCCCTATATCGTCCCGATTTTATCGGAGGTCCCCGAAGGGACCGTCTAGGTCATTTAGATTGATTAAATCTACCATCCTGCATTTTAATCGAGACTAAAATGTCTCTTAGGCTAACCTAAGAATATTCATAAACACTTCTCTGACAACAGTATGTTTGATCAGAGTGATTATTTTTTTTTCTCCGTTTTCCAATAGCAATATGTCAACTGACTCGATCAATATAGATCTCAGAAGCTTCCAACTTCAATGAAAAATTCTTTGAAACTAGTTTTGCAATTTTTGGGAAAGTTTATGACTTTGTGGATTAAATCCAATGATATTGGAAGAAGGGTTAGATTGGATTCAAAGAATAGCAAGAAAGCCTCCATCTCTCTCTCTCTCAAACCTGTCCTGTCCAACCAAAATCCCAAACACCACCTTTTCCCTTTTGTTGGACCACTTTATTCAAAGGATTCAAAACAAAATGTTTAAATTCATGTGTCTCATTATCTTGTGAAGAAATTCAAACGTTGTATTGTATTTTTCTTTTTCTTTTTTTCCTTTTTCTTTTTTGCCTGTCAGTCAAAGTGAAGTTGTATTTCAATTTCTCACTAGTGGGGTGATATCCAATGCAAATTGAATTGGGG

Coding sequence (CDS)

ATGGTCTACATTACCTCGTGGGATGAATTCGTCGAGCGTTCTGTGCAGCTGTTCCGTTCCGATCCCAATTCAACGCGGTACAACATAAAGTATCGGCACTGCGATGGGAAACTGGTTCTTAAGGTCACTGATAACCGTGAGTGTCTCAAGTTCAAGACAGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAATAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCAGAAGTGACGGGCAAAGAACAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA

Protein sequence

MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ

Homology

[Close]

BLAST of MC06g1509 vs. ExPASy Swiss-Prot
Match: Q9SMU7 (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.5e-48
Identity = 90/103 (87.38%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 104
           KMEKLNNIFFTLMARGPDVD+SEVTGKEQ++ QP KKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy Swiss-Prot
Match: O04438 (Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.8e-45
Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVY+ SW+EFVERSVQLFR DPN+TRY +KYRHC+GKLVLKVTD+RECLKFKTDQAQDAK
Sbjct: 1   MVYVDSWEEFVERSVQLFRGDPNATRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 104
           KMEKLNNIFF LM RGPDVDISEV+GKEQ + Q  KKGRGR+Q
Sbjct: 61  KMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy Swiss-Prot
Match: Q55GL2 (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 GN=srp9 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16
Identity = 35/71 (49.30%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 2  VYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKK 61
          +YI  WDEF ++S QL+R+DP  TR++ K+RH +GK+VLKVT++   LKF+TD+  D K+
Sbjct: 1  MYIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKR 60

Query: 62 MEKLNNIFFTL 73
          ++++N++FF L
Sbjct: 61 IDQINSLFFRL 71

[Close]

BLAST of MC06g1509 vs. ExPASy Swiss-Prot
Match: P34642 (Signal recognition particle 9 kDa protein OS=Caenorhabditis elegans OX=6239 GN=ZK512.4 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
          M Y TSWDEF + + +L  ++P   R+  KY H  G+LVLK+TD+  CL++ T+Q QD K
Sbjct: 1  MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60

Query: 61 KMEKLNN 68
          K+EKL++
Sbjct: 61 KLEKLSS 67

[Close]

BLAST of MC06g1509 vs. ExPASy Swiss-Prot
Match: P21262 (Signal recognition particle 9 kDa protein OS=Canis lupus familiaris OX=9615 GN=SRP9 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 1  MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
          M    +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL ++TDQAQD K
Sbjct: 1  MAQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVK 60

Query: 61 KMEKLNNIFFTLM 74
          K+EK ++    LM
Sbjct: 61 KIEKFHSQLMRLM 73

[Close]

BLAST of MC06g1509 vs. NCBI nr
Match: XP_022146059.1 (signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_022146061.1 signal recognition particle 9 kDa protein isoform X1 [Momordica charantia])

HSP 1 Score: 211 bits (536), Expect = 9.56e-69
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. NCBI nr
Match: XP_022963515.1 (signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 signal recognition particle 9 kDa protein [Cucurbita moschata] >KAG7011249.1 Signal recognition particle 9 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207 bits (527), Expect = 2.26e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. NCBI nr
Match: XP_038887366.1 (signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 signal recognition particle 9 kDa protein [Benincasa hispida])

HSP 1 Score: 206 bits (524), Expect = 6.48e-67
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVY+ SWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYVASWDEFVERSVQLFRSDPNSTRYNMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. NCBI nr
Match: KAG6571487.1 (Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206 bits (523), Expect = 9.21e-67
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. NCBI nr
Match: XP_004154105.1 (signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 signal recognition particle 9 kDa protein [Cucumis sativus] >XP_008449345.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_008449346.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_031736389.1 signal recognition particle 9 kDa protein [Cucumis sativus] >KAA0057425.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa] >KGN61688.1 hypothetical protein Csa_006515 [Cucumis sativus] >TYK30124.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (522), Expect = 1.31e-66
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy TrEMBL
Match: A0A6J1CY87 (Signal recognition particle 9 kDa protein OS=Momordica charantia OX=3673 GN=LOC111015357 PE=3 SV=1)

HSP 1 Score: 211 bits (536), Expect = 4.63e-69
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy TrEMBL
Match: A0A6J1HI87 (Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111463821 PE=3 SV=1)

HSP 1 Score: 207 bits (527), Expect = 1.09e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy TrEMBL
Match: A0A6J1K1A1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111490803 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.34e-67
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFF LMARGPDVDISEVTGKEQ DAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFALMARGPDVDISEVTGKEQADAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy TrEMBL
Match: A0A6J1HSA1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111466989 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.34e-67
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKL+NIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLDNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. ExPASy TrEMBL
Match: A0A1S3BLU0 (Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC103491251 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.34e-67
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFVERSVQLFRSDP STRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPDVDISEVTGK+QVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]

BLAST of MC06g1509 vs. TAIR 10
Match: AT3G49100.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 191.0 bits (484), Expect = 4.6e-49
Identity = 90/103 (87.38%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MVYITSWDEFVERSVQLFRSDPNSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYI SWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 61  KMEKLNNIFFTLMARGPDVDISEVTGKEQVDAQPTKKGRGRKQ 104
           KMEKLNNIFFTLMARGPDVD+SEVTGKEQ++ QP KKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103

The following BLAST results are available for this feature:

BLAST of MC06g1509 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMU7	6.5e-48	87.38	Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP...	[more]
O04438	8.8e-45	82.52	Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1	[more]
Q55GL2	5.0e-16	49.30	Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 G...	[more]
P34642	1.5e-12	47.76	Signal recognition particle 9 kDa protein OS=Caenorhabditis elegans OX=6239 GN=Z...	[more]
P21262	2.0e-12	45.21	Signal recognition particle 9 kDa protein OS=Canis lupus familiaris OX=9615 GN=S...	[more]

BLAST of MC06g1509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146059.1	9.56e-69	100.00	signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_0...	[more]
XP_022963515.1	2.26e-67	97.09	signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 s...	[more]
XP_038887366.1	6.48e-67	96.12	signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 si...	[more]
KAG6571487.1	9.21e-67	96.12	Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp...	[more]
XP_004154105.1	1.31e-66	97.09	signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 sign...	[more]

BLAST of MC06g1509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY87	4.63e-69	100.00	Signal recognition particle 9 kDa protein OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1HI87	1.09e-67	97.09	Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1K1A1	6.34e-67	97.09	Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HSA1	6.34e-67	96.12	Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3BLU0	6.34e-67	97.09	Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC10349125...	[more]

BLAST of MC06g1509 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49100.1	4.6e-49	87.38	Signal recognition particle, SRP9/SRP14 subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009018	Signal recognition particle, SRP9/SRP14 subunit	GENE3D	3.30.720.10	Signal recognition particle alu RNA binding heterodimer, srp9/1	coord: 2..83 e-value: 1.3E-35 score: 123.0
IPR009018	Signal recognition particle, SRP9/SRP14 subunit	SUPERFAMILY	54762	Signal recognition particle alu RNA binding heterodimer, SRP9/14	coord: 4..79
IPR008832	Signal recognition particle, SRP9 subunit	PIRSF	PIRSF017029	SRP9	coord: 1..97 e-value: 3.5E-39 score: 130.6
IPR039432	SRP9 domain	PFAM	PF05486	SRP9-21	coord: 5..66 e-value: 1.6E-10 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..97
None	No IPR available	PANTHER	PTHR12834:SF13	SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN	coord: 1..103
IPR039914	Signal recognition particle SRP9	PANTHER	PTHR12834	SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1509.1	MC06g1509.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045900	negative regulation of translational elongation
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding