MC06g1508 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1508
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein kinase protein with adenine nucleotidealpha hydrolases-like domain
Location	MC06: 22378300 .. 22378632 (+)
RNA-Seq Expression	MC06g1508
Synteny	MC06g1508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACAAGAAAAACCCCAATCAAAATCGAAACGAATACATTAAGCGATACATCCGTCAAAACCAAGGCGACAATCGTGACCAATCCAAGCACAGCCAAGACAACTCGATCATCGAGGACACGGTTAAACACCTCCAAGGGCTCGTCCCGGGAGAAATAAAGAAAGAACCAGGCAACGAAGACGATCAAGAAGACAATCAAAGAAACAGGGTGCCAGAGGAGGCTGAGAAAGAGAATGAGAAGGACGATGAAGGTGTAATTGACGCGGAAGTACTTGAGATTGCGCTTACTCCGAATGGTCGCTTCGCCGACGGAGGCAGGGCGGGTGAAGGA

mRNA sequence

AGAAACAAGAAAAACCCCAATCAAAATCGAAACGAATACATTAAGCGATACATCCGTCAAAACCAAGGCGACAATCGTGACCAATCCAAGCACAGCCAAGACAACTCGATCATCGAGGACACGGTTAAACACCTCCAAGGGCTCGTCCCGGGAGAAATAAAGAAAGAACCAGGCAACGAAGACGATCAAGAAGACAATCAAAGAAACAGGGTGCCAGAGGAGGCTGAGAAAGAGAATGAGAAGGACGATGAAGGTGTAATTGACGCGGAAGTACTTGAGATTGCGCTTACTCCGAATGGTCGCTTCGCCGACGGAGGCAGGGCGGGTGAAGGA

Coding sequence (CDS)

AGAAACAAGAAAAACCCCAATCAAAATCGAAACGAATACATTAAGCGATACATCCGTCAAAACCAAGGCGACAATCGTGACCAATCCAAGCACAGCCAAGACAACTCGATCATCGAGGACACGGTTAAACACCTCCAAGGGCTCGTCCCGGGAGAAATAAAGAAAGAACCAGGCAACGAAGACGATCAAGAAGACAATCAAAGAAACAGGGTGCCAGAGGAGGCTGAGAAAGAGAATGAGAAGGACGATGAAGGTGTAATTGACGCGGAAGTACTTGAGATTGCGCTTACTCCGAATGGTCGCTTCGCCGACGGAGGCAGGGCGGGTGAAGGA

Protein sequence

RNKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNEDDQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADGGRAGEG

Homology

[Close]

BLAST of MC06g1508 vs. NCBI nr
Match: RXH86496.1 (hypothetical protein DVH24_021769 [Malus domestica])

HSP 1 Score: 85.9 bits (211), Expect = 4.76e-18
Identity = 46/113 (40.71%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N ++PNQNR+++++ ++R+NQ  + D  ++ Q++++++D+V++ +  V  E+++EPG+ED
Sbjct: 70  NNRDPNQNRHQHVQPHVRENQSHDGDDGENPQNDAVVDDSVENYERFVAEEVEEEPGDED 129

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG---GRAGEG 111
           ++EDN+ + VPEEAE+E+++D+  V+ AEV E+AL  +G FA+G     AGEG
Sbjct: 130 EEEDNEGDWVPEEAEEEDKEDEHRVVYAEVAEVALDSDGGFAEGVGAREAGEG 182

[Close]

BLAST of MC06g1508 vs. NCBI nr
Match: KAB2636788.1 (E3 ubiquitin protein ligase DRIP2-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 80.5 bits (197), Expect = 6.88e-15
Identity = 46/113 (40.71%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N + PNQNR ++++ ++R++Q  + D S+  Q++++I+D+V++ +  V  E+++EPG+ED
Sbjct: 536 NNREPNQNRYQHVQPHVREDQSHDGDDSESPQNDAVIDDSVENYERFVAEEVEEEPGDED 595

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG---GRAGEG 111
           ++ED++ + VP+EAE+E+E+D   V+ AEV E+AL  +G FA G     AGEG
Sbjct: 596 EEEDDEGDGVPKEAEEEDEEDKHRVVHAEVAEVALDSDGGFAKGVGAREAGEG 648

[Close]

BLAST of MC06g1508 vs. NCBI nr
Match: RXH78243.1 (hypothetical protein DVH24_001761 [Malus domestica])

HSP 1 Score: 68.2 bits (165), Expect = 7.40e-12
Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N+ +PN  RN+ +  ++ Q+Q  NR   K++  +S+ +   +HL+GLV GE++ EPG ED
Sbjct: 31  NQNDPNHPRNDDVDPHVSQDQSHNRHHRKNNHHDSVRDHKPEHLEGLVTGEVEHEPGGED 90

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGR 101
           DQED+    V EEAE+E+++ D+GV+ AEV ++ L  +GR
Sbjct: 91  DQEDDDGEWVVEEAEEEHDQGDQGVVGAEVGQV-LGESGR 129

[Close]

BLAST of MC06g1508 vs. NCBI nr
Match: RXH98348.1 (hypothetical protein DVH24_010673 [Malus domestica])

HSP 1 Score: 70.9 bits (172), Expect = 1.68e-11
Identity = 39/104 (37.50%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 2    NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
            N + PNQNR ++++ +         D  ++ Q++++++D+V++ +  V  E+++EPG+ED
Sbjct: 922  NNREPNQNRYQHVQPHSHDG-----DDGENPQNDAVVDDSVENYERFVAEEVEEEPGDED 981

Query: 62   DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG 105
            ++ED++   VPEEAE+E+E+D   V+ AEV E+AL  +G FA+G
Sbjct: 982  EEEDDEGEGVPEEAEEEDEEDKHSVVHAEVAEVALDSDGGFAEG 1020

[Close]

BLAST of MC06g1508 vs. NCBI nr
Match: KAF3973387.1 (hypothetical protein CMV_003168 [Castanea mollissima])

HSP 1 Score: 66.2 bits (160), Expect = 2.39e-10
Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 25  NRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNEDDQEDNQRNRVPEEAEKENEKDDE 84
           N D  +  QD+++++  V+  +  V  E+++ PG+ED +EDN  +RVPEEAE+E+E+ DE
Sbjct: 109 NGDDGEQGQDDAVVDSDVEEEEWTVTKEVEERPGDEDGKEDNHGDRVPEEAEEEDEERDE 168

Query: 85  GVIDAEVLEIALTPNGRFADGGRAGEG 111
            V+ AEV+E+ L   G F +  RA EG
Sbjct: 169 HVVHAEVIEVVLDAGGGFDECVRAREG 195

[Close]

BLAST of MC06g1508 vs. ExPASy TrEMBL
Match: A0A498IT65 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021769 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.30e-18
Identity = 46/113 (40.71%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N ++PNQNR+++++ ++R+NQ  + D  ++ Q++++++D+V++ +  V  E+++EPG+ED
Sbjct: 70  NNRDPNQNRHQHVQPHVRENQSHDGDDGENPQNDAVVDDSVENYERFVAEEVEEEPGDED 129

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG---GRAGEG 111
           ++EDN+ + VPEEAE+E+++D+  V+ AEV E+AL  +G FA+G     AGEG
Sbjct: 130 EEEDNEGDWVPEEAEEEDKEDEHRVVYAEVAEVALDSDGGFAEGVGAREAGEG 182

[Close]

BLAST of MC06g1508 vs. ExPASy TrEMBL
Match: A0A5N5IAF5 (E3 ubiquitin protein ligase DRIP2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_027322 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.33e-15
Identity = 46/113 (40.71%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N + PNQNR ++++ ++R++Q  + D S+  Q++++I+D+V++ +  V  E+++EPG+ED
Sbjct: 536 NNREPNQNRYQHVQPHVREDQSHDGDDSESPQNDAVIDDSVENYERFVAEEVEEEPGDED 595

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG---GRAGEG 111
           ++ED++ + VP+EAE+E+E+D   V+ AEV E+AL  +G FA G     AGEG
Sbjct: 596 EEEDDEGDGVPKEAEEEDEEDKHRVVHAEVAEVALDSDGGFAKGVGAREAGEG 648

[Close]

BLAST of MC06g1508 vs. ExPASy TrEMBL
Match: A0A498IAT1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_001761 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.58e-12
Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 2   NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
           N+ +PN  RN+ +  ++ Q+Q  NR   K++  +S+ +   +HL+GLV GE++ EPG ED
Sbjct: 31  NQNDPNHPRNDDVDPHVSQDQSHNRHHRKNNHHDSVRDHKPEHLEGLVTGEVEHEPGGED 90

Query: 62  DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGR 101
           DQED+    V EEAE+E+++ D+GV+ AEV ++ L  +GR
Sbjct: 91  DQEDDDGEWVVEEAEEEHDQGDQGVVGAEVGQV-LGESGR 129

[Close]

BLAST of MC06g1508 vs. ExPASy TrEMBL
Match: A0A498JRE4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_010673 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.15e-12
Identity = 39/104 (37.50%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 2    NKKNPNQNRNEYIKRYIRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNED 61
            N + PNQNR ++++ +         D  ++ Q++++++D+V++ +  V  E+++EPG+ED
Sbjct: 922  NNREPNQNRYQHVQPHSHDG-----DDGENPQNDAVVDDSVENYERFVAEEVEEEPGDED 981

Query: 62   DQEDNQRNRVPEEAEKENEKDDEGVIDAEVLEIALTPNGRFADG 105
            ++ED++   VPEEAE+E+E+D   V+ AEV E+AL  +G FA+G
Sbjct: 982  EEEDDEGEGVPEEAEEEDEEDKHSVVHAEVAEVALDSDGGFAEG 1020

[Close]

BLAST of MC06g1508 vs. ExPASy TrEMBL
Match: A0A5A7QT97 (Protein kinase protein with adenine nucleotidealpha hydrolases-like domain (Fragment) OS=Striga asiatica OX=4170 GN=STAS_24764 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.61e-10
Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 18  IRQNQGDNRDQSKHSQDNSIIEDTVKHLQGLVPGEIKKEPGNEDDQEDNQRNRVPEEAEK 77
           +RQ Q D+R   +  QD+ I + + +HL+ LVP +++++PG     ED++R+ VPEEAE+
Sbjct: 55  VRQQQDDHRRHGERDQDHPICDQSTEHLERLVPEKVEEQPGRHHRDEDDERDWVPEEAEE 114

Query: 78  ENEKDDEGVIDAEVLEIALTPNGRFADGGRAGE 110
           ++ +DD+GV+  EV E+      R A G R  E
Sbjct: 115 QDAEDDDGVVHPEVGEVLPHARRRLAGGSREAE 147

The following BLAST results are available for this feature:

BLAST of MC06g1508 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1508 vs. NCBI nr


Match Name	E-value	Identity	Description
RXH86496.1	4.76e-18	40.71	hypothetical protein DVH24_021769 [Malus domestica]	[more]
KAB2636788.1	6.88e-15	40.71	E3 ubiquitin protein ligase DRIP2-like [Pyrus ussuriensis x Pyrus communis]	[more]
RXH78243.1	7.40e-12	42.00	hypothetical protein DVH24_001761 [Malus domestica]	[more]
RXH98348.1	1.68e-11	37.50	hypothetical protein DVH24_010673 [Malus domestica]	[more]
KAF3973387.1	2.39e-10	42.53	hypothetical protein CMV_003168 [Castanea mollissima]	[more]

BLAST of MC06g1508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498IT65	2.30e-18	40.71	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021769 PE=4 SV=1	[more]
A0A5N5IAF5	3.33e-15	40.71	E3 ubiquitin protein ligase DRIP2-like OS=Pyrus ussuriensis x Pyrus communis OX=...	[more]
A0A498IAT1	3.58e-12	42.00	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_001761 PE=4 SV=1	[more]
A0A498JRE4	8.15e-12	37.50	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_010673 PE=3 SV=1	[more]
A0A5A7QT97	3.61e-10	38.71	Protein kinase protein with adenine nucleotidealpha hydrolases-like domain (Frag...	[more]

BLAST of MC06g1508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1508.1	MC06g1508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006810	transport
molecular_function	GO:0016740	transferase activity