Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGTGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAAC
mRNA sequence
TTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGTGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAAC
Coding sequence (CDS)
TTGAGGAGGAAGTTTGGGGAGCTGAAAGATATTAATGAGAAGCAAGAATCAAGGGTGTGTTACCATGAGGCCAAATTCCAGAAAATCGTTTCTGGATACCTCATTTTAACACGCTTGTTCTTCTTTGGCATCTCCCAGACTTCTTCCTCCAAGTGCCACGATTGGTGGGTCATTCTGTCTTTAAGTCTTTTGTGTAGCTTTGTCTACTTTTTGCTTTTCCTGGATGCTGCCACTAGACTGTATCAGACCAAGGGCCAACTAGACATGATCTGCAAGGAACTAATTGAAGTTTGCCAACAAATTTTGGTAGCCCAAAACCAAGATGATGTGGATCTAGCAATGGAGGGTGGGGATTTTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGCTTGACCACTTTAGATTTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGGTTGCTGTGACTGCTATTGAGTTATATGTTTCCAAGTATTTGTTGTGCAAC
Protein sequence
LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFSDGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Homology
BLAST of MC06g1410 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 331 bits (848), Expect = 4.40e-114
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 60
LRRKFGELKDINEKQESRV YHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS
Sbjct: 6 LRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 65
Query: 61 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 120
LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS
Sbjct: 66 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 125
Query: 121 DGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
DGFEFGFHEKML+LDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Sbjct: 126 DGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MC06g1410 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 254 bits (650), Expect = 6.82e-84
Identity = 134/171 (78.36%), Postives = 148/171 (86.55%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHDWWVIL 60
L RKF ELKDINEKQESRV Y+E K Q IV GYLI TRLFFFGISQTSSS C DWWVIL
Sbjct: 6 LERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWWVIL 65
Query: 61 SLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDF 120
+LSLLCSF+YFLLFLDA L++T+ QLD+ICKEL E+ QQILV++NQDDV L+ME G+
Sbjct: 66 ALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMETGES 125
Query: 121 SDGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
S GFEFGFHEKMLMLDHFR VGRKVYIYFTV AL+AVTAIELYVSKY+LCN
Sbjct: 126 SGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MC06g1410 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 223 bits (567), Expect = 2.75e-71
Identity = 113/170 (66.47%), Postives = 137/170 (80.59%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 60
L+R+F EL D+NEKQE++VCYH+ K Q IV GYLI RLF +GISQ S KC++WWVIL+
Sbjct: 6 LKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNWWVILA 65
Query: 61 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 120
LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E G+
Sbjct: 66 LSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGESR 125
Query: 121 DGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
DGFEFGFH+KMLMLDH VGR VYIYF VCAL+AV AIELY KYLLC
Sbjct: 126 DGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
BLAST of MC06g1410 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 219 bits (559), Expect = 1.43e-69
Identity = 112/170 (65.88%), Postives = 136/170 (80.00%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 60
L+R+ EL D+NEKQE++VCYH+ K Q IV GYLI RLFF+GISQ S KC++WWVIL+
Sbjct: 41 LKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSFKCNNWWVILA 100
Query: 61 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 120
LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E G+
Sbjct: 101 LSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGESC 160
Query: 121 DGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
D FEFGFH+KMLMLDH VGR VYIYF VCAL+AV AIELY KYLLC
Sbjct: 161 DRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 209
BLAST of MC06g1410 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 198 bits (504), Expect = 1.31e-61
Identity = 108/173 (62.43%), Postives = 129/173 (74.57%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCHDWWVI 60
L+R F LKD+ EKQESRV YHE++ Q I YLI RLFFF ISQTSSS KC DWW++
Sbjct: 6 LKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCIDWWMV 65
Query: 61 LSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDLAMEGG 120
L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDLAME G
Sbjct: 66 LGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLAMEAG 125
Query: 121 DFSDGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
D SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY +L C+
Sbjct: 126 DSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MC06g1410 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 331 bits (848), Expect = 2.13e-114
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 60
LRRKFGELKDINEKQESRV YHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS
Sbjct: 6 LRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 65
Query: 61 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 120
LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS
Sbjct: 66 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 125
Query: 121 DGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
DGFEFGFHEKML+LDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN
Sbjct: 126 DGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of MC06g1410 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 254 bits (650), Expect = 3.30e-84
Identity = 134/171 (78.36%), Postives = 148/171 (86.55%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHDWWVIL 60
L RKF ELKDINEKQESRV Y+E K Q IV GYLI TRLFFFGISQTSSS C DWWVIL
Sbjct: 6 LERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWWVIL 65
Query: 61 SLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDF 120
+LSLLCSF+YFLLFLDA L++T+ QLD+ICKEL E+ QQILV++NQDDV L+ME G+
Sbjct: 66 ALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMETGES 125
Query: 121 SDGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
S GFEFGFHEKMLMLDHFR VGRKVYIYFTV AL+AVTAIELYVSKY+LCN
Sbjct: 126 SGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of MC06g1410 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 198 bits (504), Expect = 6.36e-62
Identity = 108/173 (62.43%), Postives = 129/173 (74.57%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSS--KCHDWWVI 60
L+R F LKD+ EKQESRV YHE++ Q I YLI RLFFF ISQTSSS KC DWW++
Sbjct: 6 LKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCIDWWMV 65
Query: 61 LSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQ-DDVDLAMEGG 120
L LS+ C+FVYFL FL+A T LY+ + Q+D+ICKE E+CQQILVA++Q DDVDLAME G
Sbjct: 66 LGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLAMEAG 125
Query: 121 DFSDGFEFGFHEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
D SDGF+F FH K+L FR V RK YI TV AL+AVTAIELY +L C+
Sbjct: 126 DSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of MC06g1410 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 198 bits (503), Expect = 3.03e-61
Identity = 109/172 (63.37%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 LRRKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWVILS 60
LRR F LKDIN+ QE+ + Y E K Q +V GYL RLFFFG+S S KC DWWVIL+
Sbjct: 50 LRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSF--SFKCKDWWVILA 109
Query: 61 LSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGGDFS 120
L+L +F YFLLF+DA L +T QLD+I KEL E+CQQILVAQNQD+V L+ME G+ S
Sbjct: 110 LTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGEDS 169
Query: 121 DGFEFGFHEKMLMLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
DGFE FHE+M MLD FR V GRKVYIYF VC L+A+TAIELY K LLCN
Sbjct: 170 DGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of MC06g1410 vs. ExPASy TrEMBL
Match:
A0A5A7TLI0 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00770 PE=4 SV=1)
HSP 1 Score: 191 bits (484), Expect = 6.95e-59
Identity = 105/175 (60.00%), Postives = 129/175 (73.71%), Query Frame = 0
Query: 3 RKFGELKDINEKQESRVCYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHDWWVILSL 62
R F E+ I ++QE +VCYHE K Q +V GYL+ RL FG +QTS KC DWWVIL+L
Sbjct: 7 RSFEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFGFTQTSLPFKCKDWWVILAL 66
Query: 63 SLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDV----DLAMEGG 122
+L C+ VYF L LDA T L +T+ +LD+I KELIE+CQ+ILV+QNQ D+ L ME
Sbjct: 67 TLSCTLVYFSLLLDAVTMLCRTEYELDIIRKELIEICQRILVSQNQRDLVDLTQLTMEAE 126
Query: 123 DFSDGFEFGF--HEKMLMLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 170
+ SDGF+FGF H+KMLMLDHFR V RKV+IYFTV AL+ V IELYVSKYLLC+
Sbjct: 127 ESSDGFDFGFGFHQKMLMLDHFRTVRRKVHIYFTVSALLVVVVIELYVSKYLLCH 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022157176.1 | 4.40e-114 | 98.82 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
XP_022157182.1 | 6.82e-84 | 78.36 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
KAG6579338.1 | 2.75e-71 | 66.47 | hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016840.1 | 1.43e-69 | 65.88 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022157130.1 | 1.31e-61 | 62.43 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DX74 | 2.13e-114 | 98.82 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DSQ0 | 3.30e-84 | 78.36 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DS87 | 6.36e-62 | 62.43 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 3.03e-61 | 63.37 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5A7TLI0 | 6.95e-59 | 60.00 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |