MC06g1371 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1371
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 20892468 .. 20892662 (+)
RNA-Seq ExpressionMC06g1371
SyntenyMC06g1371
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAGCCTCCTCGGGATCTTCGTGGTCGTCGGAGGTGGAGAGATTGATGCAGGAGCAGCGCTCGAGGGAGGCGAAGAAGGCGGAGGCGACGCTGGTTCCGACCCATGTGGCCATGCCGTTGAGCTTCTCGTACGACAAGCAGGTGCTCTGATTCTCCATGGCTATGGCGGATTCGCTCTTCCCGTTGCTTGCCTT

mRNA sequence

GTGAGCCTCCTCGGGATCTTCGTGGTCGTCGGAGGTGGAGAGATTGATGCAGGAGCAGCGCTCGAGGGAGGCGAAGAAGGCGGAGGCGACGCTGGTTCCGACCCATGTGGCCATGCCGTTGAGCTTCTCGTACGACAAGCAGGTGCTCTGATTCTCCATGGCTATGGCGGATTCGCTCTTCCCGTTGCTTGCCTT

Coding sequence (CDS)

GTGAGCCTCCTCGGGATCTTCGTGGTCGTCGGAGGTGGAGAGATTGATGCAGGAGCAGCGCTCGAGGGAGGCGAAGAAGGCGGAGGCGACGCTGGTTCCGACCCATGTGGCCATGCCGTTGAGCTTCTCGTACGACAAGCAGGTGCTCTGATTCTCCATGGCTATGGCGGATTCGCTCTTCCCGTTGCTTGCCTT

Protein sequence

VSLLGIFVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALILHGYGGFALPVACL
Homology
BLAST of MC06g1371 vs. NCBI nr
Match: TQE04631.1 (hypothetical protein C1H46_009714 [Malus baccata])

HSP 1 Score: 66.6 bits (161), Expect = 9.44e-12
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   VSLLGI-FVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALIL 52
           V LLG+ FVVVGGGE+DAGAAL+GGEEGGG  G  P G AV+LLVRQA AL L
Sbjct: 54  VGLLGVGFVVVGGGEVDAGAALKGGEEGGGHVGPKPTGDAVDLLVRQARALAL 106

BLAST of MC06g1371 vs. NCBI nr
Match: TQD94557.1 (hypothetical protein C1H46_019802 [Malus baccata])

HSP 1 Score: 64.7 bits (156), Expect = 3.91e-10
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   VSLLGI-FVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALIL 52
           V LLG+ F+VVGGGE+DAGAALEG EEGGG+ G  P G AV+LLVRQA AL L
Sbjct: 55  VGLLGVGFLVVGGGEVDAGAALEGVEEGGGNVGPKPAGDAVDLLVRQARALAL 107

BLAST of MC06g1371 vs. NCBI nr
Match: KAF5731309.1 (hypothetical protein HS088_TW19G00917 [Tripterygium wilfordii])

HSP 1 Score: 53.5 bits (127), Expect = 4.79e-07
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 2  SLLGIFVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALILH 53
          +++GIF VVGGGE+DAG   EG EEGG  AG  P  H+V+ L+RQ    I+H
Sbjct: 45 AVVGIFGVVGGGEVDAGTPFEGREEGGSHAGPHPRRHSVQFLIRQTRGQIVH 96

BLAST of MC06g1371 vs. NCBI nr
Match: KAF7826206.1 (hypothetical protein G2W53_017370 [Senna tora])

HSP 1 Score: 53.1 bits (126), Expect = 5.84e-07
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 2   SLLGI--FVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALILHGYGGFA 61
           +++GI  FVVVGG EIDAGA+L+GGEE G D G++P   A+E +    G  +LH     A
Sbjct: 41  TIIGIVFFVVVGGAEIDAGASLQGGEENGCDVGAEPVSEAIEFIAGDGGGGVLHFGIAIA 100

Query: 62  LPVA 63
           L +A
Sbjct: 101 LALA 104

BLAST of MC06g1371 vs. NCBI nr
Match: KAF3455453.1 (hypothetical protein FNV43_RR00080 [Rhamnella rubrinervis])

HSP 1 Score: 49.7 bits (117), Expect = 9.62e-06
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 5  GIFVVV---GGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALIL 52
          G+ VVV    GGE+D G  LEGGEEGGG+ G DP GH ++LL  + G +I+
Sbjct: 28 GVVVVVFEIDGGEMDKGVVLEGGEEGGGNNGDDPVGHTIQLLAGKKGCVIV 78

BLAST of MC06g1371 vs. ExPASy TrEMBL
Match: A0A540N0Q2 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009714 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.57e-12
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   VSLLGI-FVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALIL 52
           V LLG+ FVVVGGGE+DAGAAL+GGEEGGG  G  P G AV+LLVRQA AL L
Sbjct: 54  VGLLGVGFVVVGGGEVDAGAALKGGEEGGGHVGPKPTGDAVDLLVRQARALAL 106

BLAST of MC06g1371 vs. ExPASy TrEMBL
Match: A0A540M725 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_019802 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.89e-10
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   VSLLGI-FVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALIL 52
           V LLG+ F+VVGGGE+DAGAALEG EEGGG+ G  P G AV+LLVRQA AL L
Sbjct: 55  VGLLGVGFLVVGGGEVDAGAALEGVEEGGGNVGPKPAGDAVDLLVRQARALAL 107

BLAST of MC06g1371 vs. ExPASy TrEMBL
Match: A0A7J7CB18 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00917 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.32e-07
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 2  SLLGIFVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELLVRQAGALILH 53
          +++GIF VVGGGE+DAG   EG EEGG  AG  P  H+V+ L+RQ    I+H
Sbjct: 45 AVVGIFGVVGGGEVDAGTPFEGREEGGSHAGPHPRRHSVQFLIRQTRGQIVH 96

BLAST of MC06g1371 vs. ExPASy TrEMBL
Match: A0A0D3A5T6 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.24e-04
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0

Query: 6  IFVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELL 43
          +FVV+G GEIDAGAA+EGGEE G D G++P    ++LL
Sbjct: 21 VFVVMGSGEIDAGAAVEGGEESGDDRGAEPARCLIDLL 58

BLAST of MC06g1371 vs. ExPASy TrEMBL
Match: D7M8Y5 (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_492459 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 6.38e-04
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 6  IFVVVGGGEIDAGAALEGGEEGGGDAGSDPCGHAVELL 43
          +F+++ GGEIDAGA  EGGEE G D G+DP    V+LL
Sbjct: 20 VFIIMRGGEIDAGATFEGGEESGDDGGADPARGVVDLL 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TQE04631.19.44e-1273.58hypothetical protein C1H46_009714 [Malus baccata][more]
TQD94557.13.91e-1071.70hypothetical protein C1H46_019802 [Malus baccata][more]
KAF5731309.14.79e-0753.85hypothetical protein HS088_TW19G00917 [Tripterygium wilfordii][more]
KAF7826206.15.84e-0748.44hypothetical protein G2W53_017370 [Senna tora][more]
KAF3455453.19.62e-0652.94hypothetical protein FNV43_RR00080 [Rhamnella rubrinervis][more]
Match NameE-valueIdentityDescription
A0A540N0Q24.57e-1273.58Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009714 PE=4 SV=1[more]
A0A540M7251.89e-1071.70Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_019802 PE=4 SV=1[more]
A0A7J7CB182.32e-0753.85Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00917 ... [more]
A0A0D3A5T63.24e-0460.53Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1[more]
D7M8Y56.38e-0457.89Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRA... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1371.1MC06g1371.1mRNA