MC06g1346 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1346
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionResponse to low sulfur protein, putative
LocationMC06: 20675914 .. 20676153 (+)
RNA-Seq ExpressionMC06g1346
SyntenyMC06g1346
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAACCGAAACGAGGAGCTGGAGAAGGAGCTGCAGCAGAGCCACGAGAGAGAGGAGATTATGAGGGAGGAGCTGAAGAGGGCGTGGGAAAGGCTGAGGGTGGCAGAGGAGGCTGAAGAGAGGCTTTCGTCGCAGCTGGGGGAGCTGGAGGCAGAGGCTCTCACACAGGCTCGTGATTATCACCAACAAATCGCATCATTGATGAACCAGCTCTCTCGAGCTCATCAACTCTTGCAAGCT

mRNA sequence

CGAAACCGAAACGAGGAGCTGGAGAAGGAGCTGCAGCAGAGCCACGAGAGAGAGGAGATTATGAGGGAGGAGCTGAAGAGGGCGTGGGAAAGGCTGAGGGTGGCAGAGGAGGCTGAAGAGAGGCTTTCGTCGCAGCTGGGGGAGCTGGAGGCAGAGGCTCTCACACAGGCTCGTGATTATCACCAACAAATCGCATCATTGATGAACCAGCTCTCTCGAGCTCATCAACTCTTGCAAGCT

Coding sequence (CDS)

CGAAACCGAAACGAGGAGCTGGAGAAGGAGCTGCAGCAGAGCCACGAGAGAGAGGAGATTATGAGGGAGGAGCTGAAGAGGGCGTGGGAAAGGCTGAGGGTGGCAGAGGAGGCTGAAGAGAGGCTTTCGTCGCAGCTGGGGGAGCTGGAGGCAGAGGCTCTCACACAGGCTCGTGATTATCACCAACAAATCGCATCATTGATGAACCAGCTCTCTCGAGCTCATCAACTCTTGCAAGCT

Protein sequence

RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQQIASLMNQLSRAHQLLQA
Homology
BLAST of MC06g1346 vs. ExPASy Swiss-Prot
Match: Q9FIR9 (Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.1e-10
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R +N E+EK +++       M++E+ + W R +VAEEAEERL SQL ELEAE+L QARDY
Sbjct: 19 RRKNGEMEKAVEE-------MKKEMLQLWRRTQVAEEAEERLCSQLAELEAESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  LMN+LSR
Sbjct: 79 HSRIIFLMNELSR 84

BLAST of MC06g1346 vs. ExPASy Swiss-Prot
Match: Q9SCK2 (Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RN ELE+E+++       M++E+ + W R  VAEEAEERL SQL ELE E+L QARDY
Sbjct: 19 RRRNGELEREMEE-------MKKEMVQLWRRTVVAEEAEERLCSQLAELEVESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  LM+Q+SR
Sbjct: 79 HSRIVFLMDQISR 84

BLAST of MC06g1346 vs. ExPASy Swiss-Prot
Match: Q8L8S2 (Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-09
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R +N E+EK +++       MR+E+ + W R +VAEEAEE L SQL ELEAE+L QARDY
Sbjct: 19 RQKNGEMEKAVEE-------MRKEMLQLWRRTQVAEEAEEHLCSQLAELEAESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  L NQLSR
Sbjct: 79 HTRIIFLTNQLSR 84

BLAST of MC06g1346 vs. ExPASy Swiss-Prot
Match: Q9SCK1 (Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-07
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RN EL +E+ +       M+ E+ + W+R  VAEEAEE+L SQL ELE E+L QARDY
Sbjct: 19 RRRNIELSREVAE-------MKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H ++  LM+Q+SR
Sbjct: 79 HDRMLFLMDQISR 84

BLAST of MC06g1346 vs. NCBI nr
Match: XP_022137820.1 (protein RESPONSE TO LOW SULFUR 2-like [Momordica charantia])

HSP 1 Score: 138 bits (348), Expect = 2.10e-40
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1   RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
           RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY
Sbjct: 26  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 85

Query: 61  HQQIASLMNQLSRAHQLLQA 80
           HQQIASLMNQLSRAHQLLQA
Sbjct: 86  HQQIASLMNQLSRAHQLLQA 105

BLAST of MC06g1346 vs. NCBI nr
Match: XP_038875209.1 (protein RESPONSE TO LOW SULFUR 2-like [Benincasa hispida])

HSP 1 Score: 122 bits (305), Expect = 6.66e-34
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RNEELEKEL+ S ERE++MREELKRAWERL+VAEEAEERLSSQLGELEAEALTQARDY
Sbjct: 15 RRRNEELEKELEASQEREQVMREELKRAWERLKVAEEAEERLSSQLGELEAEALTQARDY 74

Query: 61 HQQIASLMNQLSRAHQLLQA 80
          HQQI SLMNQLS AH+LLQA
Sbjct: 75 HQQITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. NCBI nr
Match: XP_011654590.1 (protein RESPONSE TO LOW SULFUR 2 [Cucumis sativus] >KGN49827.1 hypothetical protein Csa_000140 [Cucumis sativus])

HSP 1 Score: 110 bits (276), Expect = 1.55e-29
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 3  RNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQ 62
          RNEELEKEL+ SHERE IMR+EL+R  ERL+VAEEAEERLS QLGELEAEALTQARDYHQ
Sbjct: 17 RNEELEKELEASHERELIMRKELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQ 76

Query: 63 QIASLMNQLSRAHQLLQA 80
          QI SLMNQLS AH+LLQA
Sbjct: 77 QITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. NCBI nr
Match: XP_008437659.1 (PREDICTED: uncharacterized protein LOC103482998 [Cucumis melo] >KAA0042521.1 ribonuclease Y-like [Cucumis melo var. makuwa] >TYK05924.1 ribonuclease Y-like [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 8.96e-29
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 3  RNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQ 62
          RNEELEKEL+ S ERE +MREEL+R  ERL+VAEEAEERLS QLGELEAEALTQARDYHQ
Sbjct: 17 RNEELEKELEASQERELVMREELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQ 76

Query: 63 QIASLMNQLSRAHQLLQA 80
          QI SLMNQLS AH+LLQA
Sbjct: 77 QITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. NCBI nr
Match: KAG6605817.1 (Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035779.1 Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (270), Expect = 1.60e-28
Identity = 64/79 (81.01%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RNEELEKELQ S ERE++MR++L+RA ERL+VAEEAEERLSSQLGELEAEALTQARDY
Sbjct: 18 RRRNEELEKELQASREREQVMRQQLQRACERLKVAEEAEERLSSQLGELEAEALTQARDY 77

Query: 61 HQQIASLMNQLSRAHQLLQ 79
          H QIA+LMNQLS+A +LLQ
Sbjct: 78 HHQIAALMNQLSQAQKLLQ 96

BLAST of MC06g1346 vs. ExPASy TrEMBL
Match: A0A6J1C7R4 (protein RESPONSE TO LOW SULFUR 2-like OS=Momordica charantia OX=3673 GN=LOC111009164 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 1.02e-40
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1   RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
           RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY
Sbjct: 26  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 85

Query: 61  HQQIASLMNQLSRAHQLLQA 80
           HQQIASLMNQLSRAHQLLQA
Sbjct: 86  HQQIASLMNQLSRAHQLLQA 105

BLAST of MC06g1346 vs. ExPASy TrEMBL
Match: A0A0A0KN32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139070 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 7.51e-30
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 3  RNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQ 62
          RNEELEKEL+ SHERE IMR+EL+R  ERL+VAEEAEERLS QLGELEAEALTQARDYHQ
Sbjct: 17 RNEELEKELEASHERELIMRKELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQ 76

Query: 63 QIASLMNQLSRAHQLLQA 80
          QI SLMNQLS AH+LLQA
Sbjct: 77 QITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. ExPASy TrEMBL
Match: A0A5A7TLR6 (Ribonuclease Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00160 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 4.34e-29
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 3  RNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQ 62
          RNEELEKEL+ S ERE +MREEL+R  ERL+VAEEAEERLS QLGELEAEALTQARDYHQ
Sbjct: 17 RNEELEKELEASQERELVMREELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQ 76

Query: 63 QIASLMNQLSRAHQLLQA 80
          QI SLMNQLS AH+LLQA
Sbjct: 77 QITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. ExPASy TrEMBL
Match: A0A1S3AV51 (uncharacterized protein LOC103482998 OS=Cucumis melo OX=3656 GN=LOC103482998 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 4.34e-29
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 3  RNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQ 62
          RNEELEKEL+ S ERE +MREEL+R  ERL+VAEEAEERLS QLGELEAEALTQARDYHQ
Sbjct: 17 RNEELEKELEASQERELVMREELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQ 76

Query: 63 QIASLMNQLSRAHQLLQA 80
          QI SLMNQLS AH+LLQA
Sbjct: 77 QITSLMNQLSHAHKLLQA 94

BLAST of MC06g1346 vs. ExPASy TrEMBL
Match: A0A6J1K1F9 (protein RESPONSE TO LOW SULFUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491545 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 2.22e-28
Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RNEELEKELQ S ERE++MR++L+RA +RL+VAEEAEERLSSQLGELEAEALTQARDY
Sbjct: 18 RRRNEELEKELQASREREQVMRQQLQRACQRLKVAEEAEERLSSQLGELEAEALTQARDY 77

Query: 61 HQQIASLMNQLSRAHQLLQ 79
          H QIA+LMNQLS+A +LLQ
Sbjct: 78 HHQIAALMNQLSQAQKLLQ 96

BLAST of MC06g1346 vs. TAIR 10
Match: AT5G24660.1 (response to low sulfur 2 )

HSP 1 Score: 64.3 bits (155), Expect = 5.1e-11
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R +N E+EK +++       M++E+ + W R +VAEEAEERL SQL ELEAE+L QARDY
Sbjct: 19 RRKNGEMEKAVEE-------MKKEMLQLWRRTQVAEEAEERLCSQLAELEAESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  LMN+LSR
Sbjct: 79 HSRIIFLMNELSR 84

BLAST of MC06g1346 vs. TAIR 10
Match: AT3G49570.1 (response to low sulfur 3 )

HSP 1 Score: 63.5 bits (153), Expect = 8.6e-11
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RN ELE+E+++       M++E+ + W R  VAEEAEERL SQL ELE E+L QARDY
Sbjct: 19 RRRNGELEREMEE-------MKKEMVQLWRRTVVAEEAEERLCSQLAELEVESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  LM+Q+SR
Sbjct: 79 HSRIVFLMDQISR 84

BLAST of MC06g1346 vs. TAIR 10
Match: AT5G24655.1 (response to low sulfur 4 )

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R +N E+EK +++       MR+E+ + W R +VAEEAEE L SQL ELEAE+L QARDY
Sbjct: 19 RQKNGEMEKAVEE-------MRKEMLQLWRRTQVAEEAEEHLCSQLAELEAESLDQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H +I  L NQLSR
Sbjct: 79 HTRIIFLTNQLSR 84

BLAST of MC06g1346 vs. TAIR 10
Match: AT3G49580.1 (response to low sulfur 1 )

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  RNRNEELEKELQQSHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDY 60
          R RN EL +E+ +       M+ E+ + W+R  VAEEAEE+L SQL ELE E+L QARDY
Sbjct: 19 RRRNIELSREVAE-------MKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDY 78

Query: 61 HQQIASLMNQLSR 74
          H ++  LM+Q+SR
Sbjct: 79 HDRMLFLMDQISR 84

BLAST of MC06g1346 vs. TAIR 10
Match: AT3G49580.2 (response to low sulfur 1 )

HSP 1 Score: 43.9 bits (102), Expect = 7.1e-05
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 14 SHEREEIMREELKRAWERLRVAEEAEERLSSQLGELEAEALTQARDYHQQIASLMNQLSR 73
          + E +E+ R  ++ +       EEAEE+L SQL ELE E+L QARDYH ++  LM+Q+SR
Sbjct: 12 AEEMDELRRRNIELS------REEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISR 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FIR97.1e-1054.79Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV... [more]
Q9SCK21.2e-0954.79Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV... [more]
Q8L8S23.5e-0954.79Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV... [more]
Q9SCK11.5e-0750.68Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV... [more]
Match NameE-valueIdentityDescription
XP_022137820.12.10e-40100.00protein RESPONSE TO LOW SULFUR 2-like [Momordica charantia][more]
XP_038875209.16.66e-3487.50protein RESPONSE TO LOW SULFUR 2-like [Benincasa hispida][more]
XP_011654590.11.55e-2984.62protein RESPONSE TO LOW SULFUR 2 [Cucumis sativus] >KGN49827.1 hypothetical prot... [more]
XP_008437659.18.96e-2983.33PREDICTED: uncharacterized protein LOC103482998 [Cucumis melo] >KAA0042521.1 rib... [more]
KAG6605817.11.60e-2881.01Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. sororia... [more]
Match NameE-valueIdentityDescription
A0A6J1C7R41.02e-40100.00protein RESPONSE TO LOW SULFUR 2-like OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A0A0KN327.51e-3084.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139070 PE=4 SV=1[more]
A0A5A7TLR64.34e-2983.33Ribonuclease Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A1S3AV514.34e-2983.33uncharacterized protein LOC103482998 OS=Cucumis melo OX=3656 GN=LOC103482998 PE=... [more]
A0A6J1K1F92.22e-2879.75protein RESPONSE TO LOW SULFUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC11149154... [more]
Match NameE-valueIdentityDescription
AT5G24660.15.1e-1154.79response to low sulfur 2 [more]
AT3G49570.18.6e-1154.79response to low sulfur 3 [more]
AT5G24655.12.5e-1054.79response to low sulfur 4 [more]
AT3G49580.11.1e-0850.68response to low sulfur 1 [more]
AT3G49580.27.1e-0546.67response to low sulfur 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableCOILSCoilCoilcoord: 4..28
NoneNo IPR availablePANTHERPTHR34283:SF1PROTEIN RESPONSE TO LOW SULFUR 1coord: 1..79
IPR039282Protein response to low sulfurPANTHERPTHR34283PROTEIN RESPONSE TO LOW SULFUR 1coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1346.1MC06g1346.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098869 cellular oxidant detoxification