MC06g1328 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1328
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGlutaredoxin domain-containing protein
LocationMC06: 20294134 .. 20294208 (-)
RNA-Seq ExpressionMC06g1328
SyntenyMC06g1328
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGGGTGTGGAGATGTCAAATTTGTGCCAGGTGAGACATGTTGTGGAAGTTGTGAAGTATATTATGAAGAAGAA

mRNA sequence

GAAGGGTGTGGAGATGTCAAATTTGTGCCAGGTGAGACATGTTGTGGAAGTTGTGAAGTATATTATGAAGAAGAA

Coding sequence (CDS)

GAAGGGTGTGGAGATGTCAAATTTGTGCCAGGTGAGACATGTTGTGGAAGTTGTGAAGTATATTATGAAGAAGAA

Protein sequence

EGCGDVKFVPGETCCGSCEVYYEEE
Homology
[Close]
BLAST of MC06g1328 vs. ExPASy Swiss-Prot
Match: Q9LH89 (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana OX=3702 GN=At3g28850 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 26
           E CGDV+FVP ETC GSC+VYYE E
Sbjct: 362 EACGDVRFVPCETCSGSCKVYYEYE 386

[Close]
BLAST of MC06g1328 vs. ExPASy Swiss-Prot
Match: Q9FLE8 (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 3.1e-04
Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 26
           E CGDV+FVP ETC GSC++Y+E E
Sbjct: 336 EACGDVRFVPCETCSGSCKLYHEGE 360

[Close]
BLAST of MC06g1328 vs. NCBI nr
Match: XP_011652241.1 (uncharacterized protein At3g28850 [Cucumis sativus] >KGN59580.1 hypothetical protein Csa_002086 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 2.28e-07
Identity = 20/25 (80.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGD++FVP ETCCGSC+V+YEEE
Sbjct: 375 EGCGDIRFVPCETCCGSCKVFYEEE 399

[Close]
BLAST of MC06g1328 vs. NCBI nr
Match: CAA7051919.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 52.8 bits (125), Expect = 1.09e-06
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGDV+FVP ETC GSC+VYYEEE
Sbjct: 378 EGCGDVRFVPCETCSGSCKVYYEEE 402

[Close]
BLAST of MC06g1328 vs. NCBI nr
Match: XP_008443421.1 (PREDICTED: uncharacterized protein At3g28850-like [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 1.49e-06
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           E CGD++FVP ETCCGSC+V+YEEE
Sbjct: 371 EACGDIRFVPCETCCGSCKVFYEEE 395

[Close]
BLAST of MC06g1328 vs. NCBI nr
Match: KAA0053751.1 (Glutaredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 1.49e-06
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           E CGD++FVP ETCCGSC+V+YEEE
Sbjct: 345 EACGDIRFVPCETCCGSCKVFYEEE 369

[Close]
BLAST of MC06g1328 vs. NCBI nr
Match: KAG6588378.1 (hypothetical protein SDJN03_16943, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 51.2 bits (121), Expect = 3.81e-06
Identity = 18/25 (72.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           E CGD++FVP ETCCGSC+V+YEE+
Sbjct: 373 EACGDIRFVPCETCCGSCKVFYEED 397

[Close]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match: A0A0A0LC50 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G827230 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.11e-07
Identity = 20/25 (80.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGD++FVP ETCCGSC+V+YEEE
Sbjct: 375 EGCGDIRFVPCETCCGSCKVFYEEE 399

[Close]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match: A0A1J3HTP3 (Glutaredoxin domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LE_TR20669_c0_g1_i1_g.66129 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.28e-07
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGDV+FVP ETC GSC+VYYEEE
Sbjct: 376 EGCGDVRFVPCETCSGSCKVYYEEE 400

[Close]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match: A0A1J3FG54 (Glutaredoxin domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_TR8923_c0_g1_i1_g.32292 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.28e-07
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGDV+FVP ETC GSC+VYYEEE
Sbjct: 376 EGCGDVRFVPCETCSGSCKVYYEEE 400

[Close]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match: A0A6D2KC03 (Glutaredoxin domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS39154 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.28e-07
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGDV+FVP ETC GSC+VYYEEE
Sbjct: 378 EGCGDVRFVPCETCSGSCKVYYEEE 402

[Close]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match: A0A1J3JHT0 (Glutaredoxin domain-containing protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR737_c0_g1_i1_g.1828 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.28e-07
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 25
           EGCGDV+FVP ETC GSC+VYYEEE
Sbjct: 361 EGCGDVRFVPCETCSGSCKVYYEEE 385

[Close]
BLAST of MC06g1328 vs. TAIR 10
Match: AT3G28850.1 (Glutaredoxin family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-06
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 26
           E CGDV+FVP ETC GSC+VYYE E
Sbjct: 362 EACGDVRFVPCETCSGSCKVYYEYE 386

[Close]
BLAST of MC06g1328 vs. TAIR 10
Match: AT5G39865.1 (Glutaredoxin family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-05
Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   EGCGDVKFVPGETCCGSCEVYYEEE 26
           E CGDV+FVP ETC GSC++Y+E E
Sbjct: 336 EACGDVRFVPCETCSGSCKLYHEGE 360

The following BLAST results are available for this feature:
BLAST of MC06g1328 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LH893.7e-0576.00Uncharacterized protein At3g28850 OS=Arabidopsis thaliana OX=3702 GN=At3g28850 P... [more]
Q9FLE83.1e-0468.00Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 P... [more]
BLAST of MC06g1328 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652241.12.28e-0780.00uncharacterized protein At3g28850 [Cucumis sativus] >KGN59580.1 hypothetical pro... [more]
CAA7051919.11.09e-0684.00unnamed protein product [Microthlaspi erraticum][more]
XP_008443421.11.49e-0676.00PREDICTED: uncharacterized protein At3g28850-like [Cucumis melo][more]
KAA0053751.11.49e-0676.00Glutaredoxin [Cucumis melo var. makuwa][more]
KAG6588378.13.81e-0672.00hypothetical protein SDJN03_16943, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MC06g1328 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC501.11e-0780.00Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G82723... [more]
A0A1J3HTP35.28e-0784.00Glutaredoxin domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LE_T... [more]
A0A1J3FG545.28e-0784.00Glutaredoxin domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LC_T... [more]
A0A6D2KC035.28e-0784.00Glutaredoxin domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=M... [more]
A0A1J3JHT05.28e-0784.00Glutaredoxin domain-containing protein (Fragment) OS=Noccaea caerulescens OX=107... [more]
BLAST of MC06g1328 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G28850.12.6e-0676.00Glutaredoxin family protein [more]
AT5G39865.12.2e-0568.00Glutaredoxin family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1328.1MC06g1328.1mRNA