MC06g1317 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1317
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein
LocationMC06: 20032806 .. 20032979 (+)
RNA-Seq ExpressionMC06g1317
SyntenyMC06g1317
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAAACATTGGCTTTAATGGCAGTGCAAAGGCAAACAGCAGCTTCAAGATCGGCGAGACCATTGATCAGACTGCAGCACGGAGTCACCGGTGGGTGGCCAATGGTAACATCGACAAGACCGCCGAGCAATTTGGCACAGACGCCAAGTTTAAGAGTGTTTTTGGGGCATTTC

mRNA sequence

CCCAAAACATTGGCTTTAATGGCAGTGCAAAGGCAAACAGCAGCTTCAAGATCGGCGAGACCATTGATCAGACTGCAGCACGGAGTCACCGGTGGGTGGCCAATGGTAACATCGACAAGACCGCCGAGCAATTTGGCACAGACGCCAAGTTTAAGAGTGTTTTTGGGGCATTTC

Coding sequence (CDS)

CCCAAAACATTGGCTTTAATGGCAGTGCAAAGGCAAACAGCAGCTTCAAGATCGGCGAGACCATTGATCAGACTGCAGCACGGAGTCACCGGTGGGTGGCCAATGGTAACATCGACAAGACCGCCGAGCAATTTGGCACAGACGCCAAGTTTAAGAGTGTTTTTGGGGCATTTC

Protein sequence

PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGHF
Homology
BLAST of MC06g1317 vs. NCBI nr
Match: KAF3492506.1 (hypothetical protein DY000_02054766, partial [Brassica cretica])

HSP 1 Score: 85.9 bits (211), Expect = 1.31e-19
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGHF 58
          P+TLAL AVQRQTAAS SA P +RLQHG+TGG P V S RP S LAQTPSLRV LGHF
Sbjct: 27 PRTLALRAVQRQTAASTSASPWMRLQHGLTGGLPRVKSRRPLSTLAQTPSLRVSLGHF 84

BLAST of MC06g1317 vs. NCBI nr
Match: KAF3555844.1 (hypothetical protein F2Q69_00013986 [Brassica cretica])

HSP 1 Score: 81.6 bits (200), Expect = 5.36e-18
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+ LAL AVQRQ AASRSA P I +QHG TGGWP VT +RP S LAQTPS R  LGH
Sbjct: 6  PRILALSAVQRQAAASRSASPFISVQHGSTGGWPRVTLSRPLSTLAQTPSFRASLGH 62

BLAST of MC06g1317 vs. NCBI nr
Match: KAF2574527.1 (hypothetical protein F2Q70_00001605 [Brassica cretica])

HSP 1 Score: 80.1 bits (196), Expect = 6.14e-18
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+ LAL AVQRQ AASRSA PL+R+QHG TGG+P V  +RP S LAQTPSLR  LGH
Sbjct: 6  PRMLALSAVQRQAAASRSASPLMRVQHGFTGGFPRVMLSRPLSTLAQTPSLRASLGH 62

BLAST of MC06g1317 vs. NCBI nr
Match: PON92988.1 (hypothetical protein TorRG33x02_112670 [Trema orientale])

HSP 1 Score: 81.6 bits (200), Expect = 6.23e-18
Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+ LALMAVQRQ AASRSARP IR+Q GVTGG PMVT T PPS  A TP+ R  LGH
Sbjct: 6  PRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

BLAST of MC06g1317 vs. NCBI nr
Match: EYU30298.1 (hypothetical protein MIMGU_mgv1a017316mg [Erythranthe guttata])

HSP 1 Score: 76.6 bits (187), Expect = 1.33e-16
Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLG 56
          P+T ALMAVQRQTAASRSA P +RLQHGV GG P+V    PPS L  TPS RV  G
Sbjct: 26 PRTFALMAVQRQTAASRSANPAMRLQHGVFGGVPIVRPINPPSKLVHTPSFRVSFG 81

BLAST of MC06g1317 vs. ExPASy TrEMBL
Match: A0A2P5F5C4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.02e-18
Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+ LALMAVQRQ AASRSARP IR+Q GVTGG PMVT T PPS  A TP+ R  LGH
Sbjct: 6  PRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

BLAST of MC06g1317 vs. ExPASy TrEMBL
Match: A0A1J3DM00 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR6706_c0_g1_i1_g.22624 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.41e-17
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+  AL AVQRQ AASRSA PL+R+QHG TGG+P V  +RP S LAQTPSLR  LGH
Sbjct: 6  PRMFALRAVQRQAAASRSASPLMRVQHGSTGGFPRVMLSRPLSTLAQTPSLRASLGH 62

BLAST of MC06g1317 vs. ExPASy TrEMBL
Match: A0A1J3HGC2 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LE_TR2848_c0_g1_i1_g.7826 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.41e-17
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+  AL AVQRQ AASRSA PL+R+QHG TGG+P V  +RP S LAQTPSLR  LGH
Sbjct: 6  PRMFALRAVQRQAAASRSASPLMRVQHGSTGGFPRVMLSRPLSTLAQTPSLRASLGH 62

BLAST of MC06g1317 vs. ExPASy TrEMBL
Match: A0A1J3KA09 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=MP_TR4227_c0_g1_i1_g.11098 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.41e-17
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLGH 57
          P+  AL AVQRQ AASRSA PL+R+QHG TGG+P V  +RP S LAQTPSLR  LGH
Sbjct: 6  PRMFALRAVQRQAAASRSASPLMRVQHGSTGGFPRVMLSRPLSTLAQTPSLRASLGH 62

BLAST of MC06g1317 vs. ExPASy TrEMBL
Match: A0A022QSM1 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017316mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.45e-17
Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 1  PKTLALMAVQRQTAASRSARPLIRLQHGVTGGWPMVTSTRPPSNLAQTPSLRVFLG 56
          P+T ALMAVQRQTAASRSA P +RLQHGV GG P+V    PPS L  TPS RV  G
Sbjct: 26 PRTFALMAVQRQTAASRSANPAMRLQHGVFGGVPIVRPINPPSKLVHTPSFRVSFG 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF3492506.11.31e-1975.86hypothetical protein DY000_02054766, partial [Brassica cretica][more]
KAF3555844.15.36e-1870.18hypothetical protein F2Q69_00013986 [Brassica cretica][more]
KAF2574527.16.14e-1870.18hypothetical protein F2Q70_00001605 [Brassica cretica][more]
PON92988.16.23e-1871.93hypothetical protein TorRG33x02_112670 [Trema orientale][more]
EYU30298.11.33e-1667.86hypothetical protein MIMGU_mgv1a017316mg [Erythranthe guttata][more]
Match NameE-valueIdentityDescription
A0A2P5F5C43.02e-1871.93Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV... [more]
A0A1J3DM004.41e-1768.42Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR6706_c0_g1_i1_... [more]
A0A1J3HGC24.41e-1768.42Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LE_TR2848_c0_g1_i1_... [more]
A0A1J3KA094.41e-1768.42Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=MP_TR4227_c0_g1_i1_... [more]
A0A022QSM16.45e-1767.86Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017316mg PE... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1317.1MC06g1317.1mRNA