MC06g1308 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1308
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CCHC-type domain-containing protein
Location	MC06: 19915848 .. 19922850 (-)
RNA-Seq Expression	MC06g1308
Synteny	MC06g1308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACCAAAAGGGCTGAAATCTGAGCAGCGGGAAAACGAGAGAAGAAAAATGGGCAGTAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGATTTGAATCTCTCCTCCGCTCTTCAGAACCTAAGAGGTGATAATTCTTATTCAGTTTACTTTCTCCCCGAAATTTTGTTTGGATGTCTGAGAAAACGCCGGAAGAATCAACTCAGTGGATAATATGGCATCAAGCTACCTCTTTAATTTGTCTAATGGAAGAATAAACTTGTAATTCGGATGAGAATTTTTGCTTCCAGCATATGTAACATAACGATTAGAGTGGAGAACTTGGTGCAGCTTTATCTGTTGGTTTATTATTTGATCGTCAAGCATGTTTATGCTACTTTTCGGATTGCTGAGATTGTTTTCTTTTTTAAAAATTTCGCCAGCATATAATATTGCTACCGGTAATGCTCCTCTGACCGAAGAACAACCACCTCCCGTCGTGAAGAAGAATGAGAACCGGAAACGCCACCGGGAGCCAGAATTGTCAAGTAATCCAAAATATGATGTTGGGTACAGTGACGGACCTATGTCACATCAAGATTATATTGAGAGGAGAAGGTACGCTGAAATGTTTAATTCTTGATTTCCAATTTTTCAAGGCATGGAAGTTTTTCTTGTAGCTGATTGTTAGTGTATAATCATGCTATTGAAACGGAATTTAATGCCAAATCTCTTCAATGCTGACAGAAAAGAAGCAAATAAATCTCAACCTTACGAGATCCTTATGGAAGATGTTTTGGTAATTGAATTTTCTGGGTTTTAGTTCATAGAGAAGAGAACTTACCTACGAATGCCACTTGAAATTTTTGTTTCTATGGCAGGGAACTTCCAGCTCGGGCTTGAACTTGGTAGGATATGAAAGTAAGCTTTCAGGGCATTATTGTTATAGTTCTTTACTCGATCATACGTTGTATAGGATTACTGGGGTTTGTTATTTCTACTTTTTGATGTTGTCTTCGTATGTTTCCAGAAATTCGTACCGTGACTGGACCTAAATGGAACTTATTTCTTGTTGTTCATGATTTTTGAAGGATTAAGCTTCCATCTGGCATATAAAGTAGCATCCATCATCGTGAATGGGTCCTTTTGATGTTTCAAAAAGCTTATGTTATACTCATGGATTAGACACGTTCTCGTGAAATATTGTACTTCTCATTCTAAGAGACCACCTTCAAAAGATTAACTTTATCTGAATCCGAAATTTGAATACCCATATTTCTTTATTTTATTGTTATACTCATACATTGGATAATGTTTCTTGTTTGAACGATTCTACTCATTATTTGCTGATATGGTGGACTATTAATCCCCTCTCGTATTTGGAAGAAGACATAGGATCGATTCAGCTATCCAATGTTGCTTTGTTCAATTTTGCTTTTTTATTTTTTCAATGTTTCACATAATATATTTTTATGGGAAAATATTTAATCGTTTGCAAATTTCAACATGATATGCATTCTAACTATTTATATGGATGGAAAGTTTTTGATAATCAACTTCCTGTGCATCTGATATTTGTTATTGATTCATTATCATGGGAATCATTTTCATTTCATTTTTACATGTTCATTAGGTGATGAGAGCACGTCTTCAGAAAGTGCAGTAAAGCAAGATCATCAAAATTCCAGTTTGTTCTTGGACTCAACTATCACTTTTAAATAATTTCTCTTTCGTTGCATAGGTTATTGTTATCATGGTAATAGTGTCAAGTGGCTTAGCATCAATAAACTTTAATCTTGATTTTTAATTTTCCAAAGTTCATATTTAATACATTTAAATCTGCAATCTGCATATTGGCACAACTAGTCAGTCGTTGATTTTGGTATCTAATTTCACTGTTTCTTAGGTCCCTTGAATGAATTTGAGGAAATTAAGAGCAAAAACGAGCAATGCTTCGCCATTGCAGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATGCAATGAAGTGAGATGAGAACAATTCATTCAATGATTTCACTCACATTAAACTATTGATTTAGCCCATCCTCAGTCATTATGCATGATCATTTTGATAGACAAATGATGACATCTGCAGCATGGAGTGCAAATTGAAGCTTTTGGAAATTCTTAAACGGAGGGAGGTATTTTTGCCTACCCTTATATATGATGATAAATGATGATATTGTATATAATGATTCTGATCCTTCTTTCCCTTTCTTTTCAGGAGTCTTCAAACAGTGAAGTGAAAGATGTTGCATTACCAGAAACTAAGCATATCTTGCCTTCCCCAGAGTTTGAGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGGTAAATTTCTCTTCCATATCTTTTGTAATTATGATCATTATTTGGGAATATCAAATATTATTGTTATAGGAAGTTGACATAAATGTTTCTGATATTTAGTACAAGTGTTTCTGATATGGAGTACAAGTGTTTCAATTATCTTTTTTTGTATTACATGGTTTTCTAGTTCATTCTGGGTGGTCACCCTTAACCTTTGCACTTCTAATCACAGCTGGAAATGTCAGAAGCCAGGACACCTTGCTGAAGATTGTTTGGTTAAAACCAGTAACCAGGTTCACCATAGTAATTCATATAGAATAATTGAATCTCCAGATCATTTTGGGTCCTAGATTTGCTATGGTTAGTAATGCTTGACTAATGACTTTGACTTGCTTGTCTGTCCAGGTAATGCAACAAAAGACTTACAATATTATACCCGGTGATCTCCTTGGACTGTACAAAAGGTCAGGAACATGCTAATTGTCCATATTTTATGCTTTTACAAATTCTCATCACGGCTAGTCTTTAGTTTTAATACGTTAGAAAATGCCTACAATTTGATGGTAAATGCATTTGTTATCATGCCACGAGAGGTAATAAACCAGTGTGTCAACAAGTTGTATGACATGTTGAAATTTATACAATTCATTTTTCCAGGAATTATAATTATTTACTATTTTTTTAGTTTCCTTTCTCATAAAGCACAATATTTTTGTGTTATTAAAAAAGGAAATAATAACTGTATTCTATTTCCCACGTTGAGTCAGGAATTTATCTAAATAAATGTCACCTCCACTTTCTTGAACTCTTGATAGTTAGTTACACTCTATGTGGTCATGAGGTGGAGGCGTGGAGGCAGCAACGAGCCAAGATTTAAGATTTAGAGTAATTTATAGTTGTAAGCAGAATTTTGTCTGAAAAAGACTAATAGATAAACTGGCAGGATTTGCAATGGTTGTGTGGATTGTTTGTTAAAGAATATCTGATATTCAAATCTCCGAAATAGATTTCCTTGATTGTTCTTAACAGATGTAAGATGGATCGATAACTCACATATTAATGTAAAAGTAAAGATGCCACTAACATGAAATTGGTGTGCTTTGCATGCTTTGTGTCTGCACAGATGTTACCAGATAGGAAAAAATTTGTCAACGGAATTGTGCAACGAATGCAGCTGTTCATTTAGTTTGGCGACATGTCTTGATTGTAGCAGTGTTTACTGTGACAGGCAAGCACTTCCATGCATCCCTTCTCTTTGTTTGTATGTTTAGGATGGGTTCTACTTAGATCATATTTCGGTCTTATGTCTCTAGATTTTTTCTTCTCCATAAACTGGACTTAATTTGGTTAAAGAATTTTCTTACAAAAAAATAATAATGAGTACCAGAAAGCATTATAGTGGGAATTTAATGTCTTAAAAATCCAAGATTCAAATCCGGGATTCATTTGCATGTGCATATAGTCATCAATTCAAGGTTTTGACTGCCACAGTTTTCATGTAGGTTGGCTGGATACTCGTGGTATTTAAGGAAAAAAAAAGAAAATCATTTCAATAGTATTTAAATGTTATTTTTTTAAAATTTTCAGAAGTAGACATACCTAGTAGTTAGAGTGAAACTATTTTCAAAAGAATAATGTAACGAAGGTTATTTTGTATTATTGGTGAATTATTTTTTTAAAATGACTGGTAAACTTCTTTCTTCTAATGCCTCTCACTAGTATTTCATGTGTGTGTTTTAACGCTCAGAAATTGATTTGGAAGTTTCTTTGTTTACAGTGCAGGTCATTTAAATGAGCATATCCACGCACACCCAACTCATGGATTATATTACTCGCATAAACTCAAACGTCTTGTAAGTGTATAAGGCAGTCCATATCTTCTGTTTGTTGTGTATACTGTTGTAATAGCCTAATAGGTTTGCATTGATAAGTTCTACTTGACCGTAGATGAGATTAAATTACCATCTATGGTAATACTTCTAGCTGTACACTTTAAAAGTGTATTTTTTCTGTAGTATTTGGAAGGAACTTAGATCCTTGGGTTTCTTTTTTGATGGTCGTAAACTTTAGATCTTATATTCCTTTTGTCAAAGGGTGACAAGTTTTCTGGCCTTGGCTAAATCCGGTTTGGTCAAGGATAAGGTTCAAAGATGATTTATAAAAACAGGCATTTGATTCCATTATTGTTAGGAACTGGTCTGGGCTGTCATTTTTCTCATCTAGCTTCTCTCTTACCAAGTTTTCATACTATTCAAGGTTGAGGAGGCAGTCTGTGAGTTAACTTTGCTTAGAGATTGCATATACGTGAAAACAAGTATTTCCTTATTTTTGGGGCAAATCACTTAATTTACCCATTAGTTGATAAAAACCTATGGGCAAATCATTTCATTTTACTCATTAGTTGATAAAAAAGTATTTATTCTCAACTTCTTTCAACAGTATATTAGTTCTTGAACTAGTCTTCGTATGATATTTATGGAATGACATTCATTTAGGTTTCTGAGGCTAAAGATCCCCAAAATGATGTAAAATAGTCCTTTCATTTCACTCTCTTAAATTCACTTACAATGACTCTTAAGATAAAAAGAGCAAAATCAATTGAAAATTATTGAGACTGTTTGCATAAAGAAAAAATATACTAACGTGTCGGTTGATAGGGAGTTGGGGTGCCTTCCTTGCTGACTTCAAGGAGGGTGGCTCTATCACTAAGCAGGCTGGTAGAAATGACACAATAGTAAATTAAAATTACAGGGTTGGGACTGAGCCTCAATTCTGAATCGAGGAAGAATTAACTTATTTATGATTAGTATGCACTCTCTTATTGGCATCCTTAATTCCATCATGTTATTTATCTCTATTGTCTGTAGTGTTTTAAGGCAAATTGTTTCTCTCCCATGCTTTGAGTGACTTTTCATCTATTTTAAATGTGGCTTCACCTGTGTGATAATCACTTCTGCATGCAATAAAAGCCATCACACCTGTCATTTTAGTGATCATTTTAACTATCATCTTAACTGATGCTAAATCATGGTCGGCATAGGTAAAATGTTGCAAATCAACATGCAAGGTGACTGACATTAAGGATCTTCTGGTGTGTCATTACTGTTTCAATAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAACTTGGTAAGTATGTGGCATGTGCTATATTGTAGATTAAGACCCTCAAAAAAAATTAAGAGGTTTTGAGATTAAGTTGAGATCACTTGGGAAGATATGTATGTATTACTACAGTAAGTTATTTTTTGTTCCGAAAATTTGTAGAAGTAGATACCAATTCTTAGCTTATAAAGAATAAATCAGTGCTCTTGCAAGAGTTCTTGACAATTGACAGACCCCTCTCCCACCAACTTAATTATCATCTTACTTCCAAATTGAAAGTGGTAAAACTCTCTCATGGGAAAATAACATTTAAAATTTAATCTACTATTTCCTTCTTCGCTTTTCTAAACTTGGAGTTCTGTATCCATTGTTTTGTCTCATTTTTCTATTTGATTGCATATCTGAACGCAGGAAGGGAGTTGGACTCTCAATCATATCAGGTTCCATTTGCTGCGAAGATCACTTCACGTGGTACATATCCCAAGTTTTGTTTTTTTTTTCTTTATCACTTTCTTAAAGCTTCATTTTCTTGTCATACGCTCTCCACTTCTCTAGTCCAATCTATTAGAGTCATCCGGTGTTCCAATTGATCAGTATTCTTCAAACCGTCCCAGTAATGAATCATGTTTGTCTCTTCATTTACTTGAAACTTAATTTAAAAGGCATTTTCCTCTACATTTACTCTCAATTATTAGATTTAATACTTTTACGTGGGATCAGTTTCTAAGGTTTCTTGTAATTATTAATTAGGTGTTATTCTTTTGTCGGACTGTTTTTTTTGTATGTCCTTCTATATTCTTTCATTTCTCTTGATTAAGGCTCGATTTCTCATTTAAAAAAAAAATTATGTTTCTCTCTTTAGTTAAATCTTCATTATTTTCAAACCAAACAAAAAACCAAAGTTTCTGAACTTATAGGAGGATTTGAACTATCTGGACAGAGCTCGACTAATATCGCTTATGTGTTGCTGCAATGCTAGGCATCGGATGAACTGTTTCAACGCGGATGTTGAGGACAACGCCTATATCATCAATAGGAATGCTCAAAAAGATAAGTCCATTTCCATTAGTGATTTCATTTTCTGAGACGTCAAGAGTTCAAAGCAACTCAACTTGTTCCTTCTCTTTAACCTTCCCTCGTAGTTCCTATAGCTTCAGATCAAGATGTATTTATGAGGATTTATTTGATCCTGCGTTGGAGTTGGAGAACGTGGTGGACTGGGAAAATCATGTGCTACTCTCTCGTTCTTAATTGGATGTGTTCAATTTGAGGATTCGATCATCTTTTGTTGTTTTGTATTTATTCTTTTTATTACGAAACATGGGTTACTTGTTGGGATTTGTATTAATTTTCAAGACCTCCCATCAAAGGAGTATTGAGAATGGAATAAGTTGCGAATTTGAATCTAGTTCAACTGGTCAATACATTATAACTTCGGCATTATAACTTGGATAAAAAAAAGTGAGAAGATAGAATTCTCACTCATACGTTGAAATAGAGAAA

mRNA sequence

CTCAACCAAAAGGGCTGAAATCTGAGCAGCGGGAAAACGAGAGAAGAAAAATGGGCAGTAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGATTTGAATCTCTCCTCCGCTCTTCAGAACCTAAGAGCATATAATATTGCTACCGGTAATGCTCCTCTGACCGAAGAACAACCACCTCCCGTCGTGAAGAAGAATGAGAACCGGAAACGCCACCGGGAGCCAGAATTGTCAAGTAATCCAAAATATGATGTTGGGTACAGTGACGGACCTATGTCACATCAAGATTATATTGAGAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTACGAGATCCTTATGGAAGATGTTTTGGGAACTTCCAGCTCGGGCTTGAACTTGGTAGGATATGAAAGTGATGAGAGCACGTCTTCAGAAAGTGCAGTAAAGCAAGATCATCAAAATTCCAGTCCCTTGAATGAATTTGAGGAAATTAAGAGCAAAAACGAGCAATGCTTCGCCATTGCAGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATGCAATGAAACAAATGATGACATCTGCAGCATGGAGTGCAAATTGAAGCTTTTGGAAATTCTTAAACGGAGGGAGGAGTCTTCAAACAGTGAAGTGAAAGATGTTGCATTACCAGAAACTAAGCATATCTTGCCTTCCCCAGAGTTTGAGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGCTGGAAATGTCAGAAGCCAGGACACCTTGCTGAAGATTGTTTGGTTAAAACCAGTAACCAGGTAATGCAACAAAAGACTTACAATATTATACCCGGTGATCTCCTTGGACTGTACAAAAGATGTTACCAGATAGGAAAAAATTTGTCAACGGAATTGTGCAACGAATGCAGCTGTTCATTTAGTTTGGCGACATGTCTTGATTGTAGCAGTGTTTACTGTGACAGGCAAGCACTTCCATGCATCCCTTCTCTTTGTTTTGCAGGTCATTTAAATGAGCATATCCACGCACACCCAACTCATGGATTATATTACTCGCATAAACTCAAACGTCTTGTAAAATGTTGCAAATCAACATGCAAGGTGACTGACATTAAGGATCTTCTGGTGTGTCATTACTGTTTCAATAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAACTTGGAAGGGAGTTGGACTCTCAATCATATCAGGTTCCATTTGCTGCGAAGATCACTTCACGTGGCATCGGATGAACTGTTTCAACGCGGATGTTGAGGACAACGCCTATATCATCAATAGGAATGCTCAAAAAGATAAGTCCATTTCCATTAGTGATTTCATTTTCTGAGACGTCAAGAGTTCAAAGCAACTCAACTTGTTCCTTCTCTTTAACCTTCCCTCGTAGTTCCTATAGCTTCAGATCAAGATGTATTTATGAGGATTTATTTGATCCTGCGTTGGAGTTGGAGAACGTGGTGGACTGGGAAAATCATGTGCTACTCTCTCGTTCTTAATTGGATGTGTTCAATTTGAGGATTCGATCATCTTTTGTTGTTTTGTATTTATTCTTTTTATTACGAAACATGGGTTACTTGTTGGGATTTGTATTAATTTTCAAGACCTCCCATCAAAGGAGTATTGAGAATGGAATAAGTTGCGAATTTGAATCTAGTTCAACTGGTCAATACATTATAACTTCGGCATTATAACTTGGATAAAAAAAAGTGAGAAGATAGAATTCTCACTCATACGTTGAAATAGAGAAA

Coding sequence (CDS)

ATGGGCAGTAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGATTTGAATCTCTCCTCCGCTCTTCAGAACCTAAGAGCATATAATATTGCTACCGGTAATGCTCCTCTGACCGAAGAACAACCACCTCCCGTCGTGAAGAAGAATGAGAACCGGAAACGCCACCGGGAGCCAGAATTGTCAAGTAATCCAAAATATGATGTTGGGTACAGTGACGGACCTATGTCACATCAAGATTATATTGAGAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTACGAGATCCTTATGGAAGATGTTTTGGGAACTTCCAGCTCGGGCTTGAACTTGGTAGGATATGAAAGTGATGAGAGCACGTCTTCAGAAAGTGCAGTAAAGCAAGATCATCAAAATTCCAGTCCCTTGAATGAATTTGAGGAAATTAAGAGCAAAAACGAGCAATGCTTCGCCATTGCAGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATGCAATGAAACAAATGATGACATCTGCAGCATGGAGTGCAAATTGAAGCTTTTGGAAATTCTTAAACGGAGGGAGGAGTCTTCAAACAGTGAAGTGAAAGATGTTGCATTACCAGAAACTAAGCATATCTTGCCTTCCCCAGAGTTTGAGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGCTGGAAATGTCAGAAGCCAGGACACCTTGCTGAAGATTGTTTGGTTAAAACCAGTAACCAGGTAATGCAACAAAAGACTTACAATATTATACCCGGTGATCTCCTTGGACTGTACAAAAGATGTTACCAGATAGGAAAAAATTTGTCAACGGAATTGTGCAACGAATGCAGCTGTTCATTTAGTTTGGCGACATGTCTTGATTGTAGCAGTGTTTACTGTGACAGGCAAGCACTTCCATGCATCCCTTCTCTTTGTTTTGCAGGTCATTTAAATGAGCATATCCACGCACACCCAACTCATGGATTATATTACTCGCATAAACTCAAACGTCTTGTAAAATGTTGCAAATCAACATGCAAGGTGACTGACATTAAGGATCTTCTGGTGTGTCATTACTGTTTCAATAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAACTTGGAAGGGAGTTGGACTCTCAATCATATCAGGTTCCATTTGCTGCGAAGATCACTTCACGTGGCATCGGATGAACTGTTTCAACGCGGATGTTGAGGACAACGCCTATATCATCAATAGGAATGCTCAAAAAGATAAGTCCATTTCCATTAGTGATTTCATTTTCTGA

Protein sequence

MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNECSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

Homology

[Close]

BLAST of MC06g1308 vs. ExPASy Swiss-Prot
Match: Q5T1V6 (Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-12
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 122 STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICS 181
           S S E   K  H +  P+  F +      Q +A  GEP+CVVCGRYGEYIC++T++D+CS
Sbjct: 74  SVSPEQGAKDSHPSEEPVKSFSK-----TQRWAEPGEPICVVCGRYGEYICDKTDEDVCS 133

Query: 182 MECKLKLLEILKRREESS 200
           +ECK K L  +K +EE S
Sbjct: 134 LECKAKHLLQVKEKEEKS 146

[Close]

BLAST of MC06g1308 vs. ExPASy Swiss-Prot
Match: Q0E2Z7 (DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0201900 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-12
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 132 DHQNSSPLNEFE-EIKSKNEQCF----AIAGEPVCVVCGRYGEYICNETNDDICSMECKL 191
           DH ++ P N  E E  S  E+CF    A+ GEP CV+CGRYGEYIC++T+DDICS+ECK 
Sbjct: 10  DHLSAQPGNGNELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKT 69

Query: 192 KLLEILKRREESSNSEVKDVALP 210
            LL  L           K V LP
Sbjct: 70  ILLSKLSAETRPVVKAAKRVNLP 92

[Close]

BLAST of MC06g1308 vs. ExPASy Swiss-Prot
Match: Q66HG7 (Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 122 STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICS 181
           ST  +  VK  H +  P+  F + +   E      GEPVCVVCGRYGEYIC++T++D+CS
Sbjct: 74  STGPDQGVKDSHPSEEPVKSFSKTQRWPE-----PGEPVCVVCGRYGEYICDKTDEDVCS 133

Query: 182 MECKLKLLEILKRREES 199
           +ECK K L  +K  E S
Sbjct: 134 LECKAKHLLQVKEEEGS 145

[Close]

BLAST of MC06g1308 vs. ExPASy Swiss-Prot
Match: Q9DBN9 (Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-11
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 122 STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICS 181
           ST  +  VK  H +  P+  F + +   E      GEPVCVVCGRYGEYIC++T++D+CS
Sbjct: 74  STGPDEGVKDSHPSEEPVKSFSKTQRWPE-----PGEPVCVVCGRYGEYICDKTDEDVCS 133

Query: 182 MECKLKLLEILKRREES--SNSEVKDVALPET 212
           +ECK K L  +K  E S   +S  +  A PE+
Sbjct: 134 LECKAKHLLQVKEGEGSLRPSSPQRVAAEPES 160

[Close]

BLAST of MC06g1308 vs. ExPASy Swiss-Prot
Match: Q3EBD3 (DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.0e-10
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 145 IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL 190
           +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Sbjct: 14  VKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALL 59

[Close]

BLAST of MC06g1308 vs. NCBI nr
Match: XP_022154829.1 (uncharacterized protein LOC111021991 [Momordica charantia])

HSP 1 Score: 887 bits (2292), Expect = 0.0
Identity = 435/447 (97.32%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE
Sbjct: 22  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE 81

Query: 61  PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD 120
           PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD
Sbjct: 82  PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD 141

Query: 121 ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC 180
           ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC
Sbjct: 142 ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC 201

Query: 181 SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC 240
           SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC
Sbjct: 202 SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC 261

Query: 241 TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC 300
           TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC
Sbjct: 262 TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC 321

Query: 301 SCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCCK 360
           SCSFSLATCLDCSSVYCD            AGHLNEHIHAHPTHGLYYSHKLKRLVKCCK
Sbjct: 322 SCSFSLATCLDCSSVYCDS-----------AGHLNEHIHAHPTHGLYYSHKLKRLVKCCK 381

Query: 361 STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN 420
           STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN
Sbjct: 382 STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN 441

Query: 421 ADVEDNAYIINRNAQKDKSISISDFIF 447
           ADVEDNAYIINRNAQKDKSISISDFIF
Sbjct: 442 ADVEDNAYIINRNAQKDKSISISDFIF 457

[Close]

BLAST of MC06g1308 vs. NCBI nr
Match: KAG7036125.1 (putative ATP-dependent RNA helicase DDX59 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 782 bits (2019), Expect = 1.58e-283
Identity = 382/448 (85.27%), Postives = 401/448 (89.51%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYNKDLNLSSALQNLRAYNIAIGNAPPTDDQPPPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           EPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLV YES
Sbjct: 61  EPELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYETLTEDVLGTSSFGLNLVVYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
           DESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 DESTSSESAVKPDHQNSSLLNEFEEVEGKTEQRFAIAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR EESSN EVKDVALPETKHILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEESSNCEVKDVALPETKHILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYKRCYQIGKNLS+ LCNE
Sbjct: 241 CTYECWKCQKPGHLAEDCLVRTSNQVMQQKTFNTVPSDLIGLYKRCYQIGKNLSSALCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHI  HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDN-----------AGHLNEHIRRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTDIKDLLVCHYCFDKAFDKFYDMYTASWNGAGLSIISGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN + +KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSEKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. NCBI nr
Match: KAG6606180.1 (putative ATP-dependent RNA helicase DDX59, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781 bits (2017), Expect = 3.18e-283
Identity = 381/448 (85.04%), Postives = 401/448 (89.51%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYNKDLNLSSALQNLRAYNIAIGNAPPTDDQPPPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           EPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLV YES
Sbjct: 61  EPELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYETLTEDVLGTSSFGLNLVVYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
           DESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 DESTSSESAVKPDHQNSSLLNEFEEVEGKTEQRFAIAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR EESSN EVKDVALPETKHILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEESSNCEVKDVALPETKHILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYKRCYQIGKNLS+ LCNE
Sbjct: 241 CTYECWKCQKPGHLAEDCLVRTSNQVMQQKTFNTVPSDLIGLYKRCYQIGKNLSSALCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHI  HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDN-----------AGHLNEHIRRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G G+SIISGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTDIKDLLVCHYCFDKAFDKFYDMYTASWNGAGISIISGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN + +KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSEKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. NCBI nr
Match: XP_022996224.1 (uncharacterized protein LOC111491515 isoform X1 [Cucurbita maxima])

HSP 1 Score: 780 bits (2015), Expect = 6.41e-283
Identity = 382/448 (85.27%), Postives = 400/448 (89.29%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QP PV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIAIGNAPPTDDQPSPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           E ELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLVGYES
Sbjct: 61  ETELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYETLSEDVLGTSSFGLNLVGYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
           DESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 DESTSSESAVKPDHQNSSLLNEFEEVEGKTEQRFAIAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR EESSN EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEESSNCEVKDVALPETKYILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYKRCYQIGKNLS  LCNE
Sbjct: 241 CTYECWKCQKPGHLAEDCLVRTSNQVMQQKTFNTVPSDLIGLYKRCYQIGKNLSNSLCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHIH HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDS-----------AGHLNEHIHRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTDIKDLLVCHYCFDKAFDKFYDMYTASWNGAGLSIISGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN +  KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSGKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. NCBI nr
Match: XP_023532353.1 (uncharacterized protein LOC111794552 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532355.1 uncharacterized protein LOC111794552 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778 bits (2008), Expect = 7.47e-282
Identity = 379/448 (84.60%), Postives = 400/448 (89.29%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIAIGNAPPTDDQPPPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           EPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLVGYES
Sbjct: 61  EPELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYETLTEDVLGTSSFGLNLVGYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
           DESTSSE+AVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 DESTSSETAVKPDHQNSSLLNEFEEVEGKTEQRFAIAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR E SSN EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEXSSNCEVKDVALPETKYILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLA DCLV+TSNQVMQQKT+N +P DL+GLYKRCYQIGKNLS  LCNE
Sbjct: 241 CTYECWKCQKPGHLAGDCLVRTSNQVMQQKTFNTVPNDLIGLYKRCYQIGKNLSNALCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHI  HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDN-----------AGHLNEHIRRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSI+SGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTDIKDLLVCHYCFDKAFDKFYDMYTASWNGAGLSILSGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN + +KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSEKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. ExPASy TrEMBL
Match: A0A6J1DNB9 (uncharacterized protein LOC111021991 OS=Momordica charantia OX=3673 GN=LOC111021991 PE=4 SV=1)

HSP 1 Score: 887 bits (2292), Expect = 0.0
Identity = 435/447 (97.32%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE
Sbjct: 22  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHRE 81

Query: 61  PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD 120
           PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD
Sbjct: 82  PELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYESD 141

Query: 121 ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC 180
           ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC
Sbjct: 142 ESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDIC 201

Query: 181 SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC 240
           SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC
Sbjct: 202 SMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLC 261

Query: 241 TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC 300
           TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC
Sbjct: 262 TYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNEC 321

Query: 301 SCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCCK 360
           SCSFSLATCLDCSSVYCD            AGHLNEHIHAHPTHGLYYSHKLKRLVKCCK
Sbjct: 322 SCSFSLATCLDCSSVYCDS-----------AGHLNEHIHAHPTHGLYYSHKLKRLVKCCK 381

Query: 361 STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN 420
           STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN
Sbjct: 382 STCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFN 441

Query: 421 ADVEDNAYIINRNAQKDKSISISDFIF 447
           ADVEDNAYIINRNAQKDKSISISDFIF
Sbjct: 442 ADVEDNAYIINRNAQKDKSISISDFIF 457

[Close]

BLAST of MC06g1308 vs. ExPASy TrEMBL
Match: A0A6J1K849 (uncharacterized protein LOC111491515 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491515 PE=4 SV=1)

HSP 1 Score: 780 bits (2015), Expect = 3.10e-283
Identity = 382/448 (85.27%), Postives = 400/448 (89.29%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QP PV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIAIGNAPPTDDQPSPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           E ELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLVGYES
Sbjct: 61  ETELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYETLSEDVLGTSSFGLNLVGYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
           DESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 DESTSSESAVKPDHQNSSLLNEFEEVEGKTEQRFAIAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR EESSN EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEESSNCEVKDVALPETKYILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYKRCYQIGKNLS  LCNE
Sbjct: 241 CTYECWKCQKPGHLAEDCLVRTSNQVMQQKTFNTVPSDLIGLYKRCYQIGKNLSNSLCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHIH HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDS-----------AGHLNEHIHRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTDIKDLLVCHYCFDKAFDKFYDMYTASWNGAGLSIISGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN +  KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSGKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. ExPASy TrEMBL
Match: A0A6J1H0R9 (uncharacterized protein LOC111459101 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459101 PE=4 SV=1)

HSP 1 Score: 768 bits (1984), Expect = 1.64e-278
Identity = 375/448 (83.71%), Postives = 398/448 (88.84%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HR 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T+++PPPV KKNENRKR  R
Sbjct: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIAIGNAPPTDDEPPPVAKKNENRKRLRR 60

Query: 61  EPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVGYES 120
           EPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE L EDVLGTSS GLNLVGYES
Sbjct: 61  EPELSGNPKYDVGSSDGPMSHQDYIEKRRKEANRPQPYEKLTEDVLGTSSFGLNLVGYES 120

Query: 121 DESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDI 180
            ESTSSES VK DHQNSS LNEFEE++ K EQ FA AGEPVCVVCGRYGEYICNETNDDI
Sbjct: 121 GESTSSESTVKPDHQNSSLLNEFEEVEGKTEQRFATAGEPVCVVCGRYGEYICNETNDDI 180

Query: 181 CSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNL 240
           CSMECK KLLEILKR EESSN EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNL
Sbjct: 181 CSMECKFKLLEILKRSEESSNCEVKDVALPETKYILPSPEFGEDTWDYKNHRWSKTKSNL 240

Query: 241 CTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTELCNE 300
           CTYECWKCQKPGHLAEDCLV++SNQVMQQK++N +P DL+GLYKRCYQIGKNL   LCNE
Sbjct: 241 CTYECWKCQKPGHLAEDCLVRSSNQVMQQKSFNPVPSDLIGLYKRCYQIGKNLLNTLCNE 300

Query: 301 CSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLVKCC 360
           CSCSFSLATCLDCS+VYCD            AGHLNEHI  HPTHGLYYSHKLKRLVKCC
Sbjct: 301 CSCSFSLATCLDCSTVYCDN-----------AGHLNEHIRRHPTHGLYYSHKLKRLVKCC 360

Query: 361 KSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCF 420
           KSTC+VT+IKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDHF WHRMNCF
Sbjct: 361 KSTCRVTNIKDLLVCHYCFDKAFDKFYDMYTASWNGAGLSIISGSICCEDHFAWHRMNCF 420

Query: 421 NADVEDNAYIINRNAQKDKSISISDFIF 447
           NADVED AYI+NRN + +KS S+SDFIF
Sbjct: 421 NADVEDAAYIVNRNTKSEKSASVSDFIF 437

[Close]

BLAST of MC06g1308 vs. ExPASy TrEMBL
Match: A0A1S3ATQ8 (uncharacterized protein LOC103482617 OS=Cucumis melo OX=3656 GN=LOC103482617 PE=4 SV=1)

HSP 1 Score: 745 bits (1924), Expect = 2.52e-269
Identity = 370/451 (82.04%), Postives = 390/451 (86.47%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRK 60
           MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAP T+ Q    P PV KKNE RK
Sbjct: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQVQPPPLPVAKKNEYRK 60

Query: 61  RHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVG 120
           R REPEL    KYDVG SDGPMSHQDYIERRRKEAN SQPYE L EDVL  SSSGLNLV 
Sbjct: 61  RRREPELPGTQKYDVGNSDGPMSHQDYIERRRKEANSSQPYETLTEDVLVASSSGLNLVD 120

Query: 121 YESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETN 180
           YESDES SS+ AVK D QNSS LN++EE+KSK EQ FA+AGEPVCVVCGRYGEYIC+ETN
Sbjct: 121 YESDESMSSDGAVKPDDQNSSLLNDYEEVKSKTEQRFAVAGEPVCVVCGRYGEYICDETN 180

Query: 181 DDICSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKK 240
           DDICS ECK KLLEILKR EE SN EVKDVALPE+K+ILPSPE  EDTWDYKNHRWSKKK
Sbjct: 181 DDICSKECKFKLLEILKRDEEFSNCEVKDVALPESKYILPSPELGEDTWDYKNHRWSKKK 240

Query: 241 SNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTEL 300
           S+LCTYECWKCQKPGHLAEDCLVKTSNQVMQQ T N +PGDLLGLYKRCYQ+GKNLS  L
Sbjct: 241 SDLCTYECWKCQKPGHLAEDCLVKTSNQVMQQTTSNPVPGDLLGLYKRCYQMGKNLSNAL 300

Query: 301 CNECSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLV 360
           CNECSCS+SLATCLDCS+VYCD            AGHLN+HIH HPTHGLYYSHKLKRLV
Sbjct: 301 CNECSCSYSLATCLDCSTVYCDS-----------AGHLNDHIHTHPTHGLYYSHKLKRLV 360

Query: 361 KCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRM 420
           KCCKSTC+VT IKDLLVCHYCF+KAFDKFYDMYTA+W   GLSIISGSICCEDHF WHRM
Sbjct: 361 KCCKSTCRVTQIKDLLVCHYCFDKAFDKFYDMYTASWNRAGLSIISGSICCEDHFAWHRM 420

Query: 421 NCFNADVEDNAYIINRNAQKDKSISISDFIF 447
           NCFNADVED AYIINR  +KDKS+SISDFIF
Sbjct: 421 NCFNADVEDTAYIINRKPKKDKSVSISDFIF 440

[Close]

BLAST of MC06g1308 vs. ExPASy TrEMBL
Match: A0A0A0KP93 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161960 PE=4 SV=1)

HSP 1 Score: 743 bits (1918), Expect = 2.07e-268
Identity = 368/451 (81.60%), Postives = 390/451 (86.47%), Query Frame = 0


Query: 1   MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRK 60
           MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAP T+ Q    P PVVKKNENRK
Sbjct: 1   MGSRTNFYKNPSISYKKDLHLSSALQNLRAYNIATGNAPPTDVQVQSPPVPVVKKNENRK 60

Query: 61  RHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSSGLNLVG 120
           R REPEL     YDVG SDGPMSHQDYIERRRKEANKSQPYE L EDVL  SSSGLNLV 
Sbjct: 61  RQREPELCGTQMYDVGNSDGPMSHQDYIERRRKEANKSQPYETLTEDVLVASSSGLNLVD 120

Query: 121 YESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETN 180
           YESDES SS+ A K D QNSS LN+++E++SK EQ FA+AGEPVCVVCGRYGEYIC+ETN
Sbjct: 121 YESDESVSSDGAEKPDVQNSSLLNDYKEVESKTEQRFAVAGEPVCVVCGRYGEYICDETN 180

Query: 181 DDICSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKK 240
           DDICSMECK KLLEILKR EE  N EVKDVALPE+K+ILPSPEF EDTWDYKNHRWSKKK
Sbjct: 181 DDICSMECKFKLLEILKRGEEFPNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKK 240

Query: 241 SNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKRCYQIGKNLSTEL 300
           SNLCTYECWKCQKPGHLAEDCLVKTSNQ MQQ T N +PGDLLGLYKRCYQ+GKNLS  L
Sbjct: 241 SNLCTYECWKCQKPGHLAEDCLVKTSNQAMQQMTSNPVPGDLLGLYKRCYQMGKNLSNAL 300

Query: 301 CNECSCSFSLATCLDCSSVYCDRQALPCIPSLCFAGHLNEHIHAHPTHGLYYSHKLKRLV 360
           CNECSCS+SLATCLDC++VYCD            AGHLNEHIH HPTHGLYYSHKLKRLV
Sbjct: 301 CNECSCSYSLATCLDCNTVYCDS-----------AGHLNEHIHTHPTHGLYYSHKLKRLV 360

Query: 361 KCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRM 420
           KCCKSTC+VT IKDLLVCHYCF+KAFDKFYDMYTA+W   GLSIISGSICCEDHF WHRM
Sbjct: 361 KCCKSTCRVTQIKDLLVCHYCFDKAFDKFYDMYTASWNRAGLSIISGSICCEDHFAWHRM 420

Query: 421 NCFNADVEDNAYIINRNAQKDKSISISDFIF 447
           NCFNADVED AYIINR  +KDK +SISDFIF
Sbjct: 421 NCFNADVEDTAYIINRKPKKDKFVSISDFIF 440

[Close]

BLAST of MC06g1308 vs. TAIR 10
Match: AT3G02065.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 5.7e-11
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 145 IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL 190
           +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Sbjct: 14  VKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALL 59

[Close]

BLAST of MC06g1308 vs. TAIR 10
Match: AT3G02065.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 5.7e-11
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 145 IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL 190
           +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Sbjct: 14  VKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALL 59

The following BLAST results are available for this feature:

BLAST of MC06g1308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5T1V6	1.0e-12	47.44	Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 ...	[more]
Q0E2Z7	5.0e-12	49.40	DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q66HG7	1.9e-11	46.75	Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59...	[more]
Q9DBN9	3.3e-11	43.48	Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1...	[more]
Q3EBD3	8.0e-10	60.87	DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 P...	[more]

BLAST of MC06g1308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154829.1	0.0	97.32	uncharacterized protein LOC111021991 [Momordica charantia]	[more]
KAG7036125.1	1.58e-283	85.27	putative ATP-dependent RNA helicase DDX59 [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6606180.1	3.18e-283	85.04	putative ATP-dependent RNA helicase DDX59, partial [Cucurbita argyrosperma subsp...	[more]
XP_022996224.1	6.41e-283	85.27	uncharacterized protein LOC111491515 isoform X1 [Cucurbita maxima]	[more]
XP_023532353.1	7.47e-282	84.60	uncharacterized protein LOC111794552 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MC06g1308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNB9	0.0	97.32	uncharacterized protein LOC111021991 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1K849	3.10e-283	85.27	uncharacterized protein LOC111491515 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H0R9	1.64e-278	83.71	uncharacterized protein LOC111459101 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3ATQ8	2.52e-269	82.04	uncharacterized protein LOC103482617 OS=Cucumis melo OX=3656 GN=LOC103482617 PE=...	[more]
A0A0A0KP93	2.07e-268	81.60	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161960 P...	[more]

BLAST of MC06g1308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02065.2	5.7e-11	60.87	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G02065.3	5.7e-11	60.87	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 243..259 e-value: 0.0065 score: 24.7
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 244..257 score: 9.784581
None	No IPR available	GENE3D	3.30.60.220		coord: 143..199 e-value: 3.6E-24 score: 85.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..136
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 1..447
None	No IPR available	PANTHER	PTHR47958:SF106	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4	coord: 1..447
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 159..185 e-value: 1.8E-6 score: 27.7
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 229..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1308.1	MC06g1308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding