MC06g1294 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1294
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 19762538 .. 19762758 (+)
RNA-Seq ExpressionMC06g1294
SyntenyMC06g1294
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTCTCTCATCCCCCAATTCAATAAGAGTTGTCGTAATTGTCAATCTATGTTCTACTACAATCTTTCTCAAAGTGTTATCTTAATTTTGATGAAGGTCCATTATGCGACGATCCTTTTAGCAAAGATTACAAGCACCGCAACTTATCCACCCACTTCGCCGTGATATCAACTTCTACAAAATCATCGATGAACCTCGATAAGGTCGAATCCTCCTTCATA

mRNA sequence

AAGTCTCTCATCCCCCAATTCAATAAGAGTTGTCGTAATTGTCAATCTATGTTCTACTACAATTCAAAGTGTTATCTTAATTTTGATGAAGGTCCATTATGCGACGATCCTTTTAGCAAAGATTACAAGCACCGCAACTTATCCACCCACTTCGCCGTGATATCAACTTCTACAAAATCATCGATGAACCTCGATAAGGTCGAATCCTCCTTCATA

Coding sequence (CDS)

AAGTCTCTCATCCCCCAATTCAATAAGAGTTGTCGTAATTGTCAATCTATGTTCTACTACAATTCAAAGTGTTATCTTAATTTTGATGAAGGTCCATTATGCGACGATCCTTTTAGCAAAGATTACAAGCACCGCAACTTATCCACCCACTTCGCCGTGATATCAACTTCTACAAAATCATCGATGAACCTCGATAAGGTCGAATCCTCCTTCATA

Protein sequence

KSLIPQFNKSCRNCQSMFYYNSKCYLNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTKSSMNLDKVESSFI
Homology
BLAST of MC06g1294 vs. NCBI nr
Match: XP_022134303.1 (uncharacterized protein LOC111006597 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 2.24e-15
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QFNKS RN QS F Y+   Y LNFDEGP+ DDPF +D+K R+ ST FA + +S K
Sbjct: 86  KTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAK 145

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 146 SSMDLGKDGLSFI 158

BLAST of MC06g1294 vs. NCBI nr
Match: XP_031741765.1 (uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical protein Csa_008790 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 1.39e-12
Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ RN QS F Y+   Y LNFDEGP  DDPF+ D+  R+ ST FA I  S K
Sbjct: 81  KTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFTDDFVRRDFSTRFAAIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDSPSFI 152

BLAST of MC06g1294 vs. NCBI nr
Match: XP_038889212.1 (uncharacterized protein LOC120079097 [Benincasa hispida])

HSP 1 Score: 67.8 bits (164), Expect = 3.84e-12
Identity = 41/73 (56.16%), Postives = 46/73 (63.01%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QFNK+ RN QS F Y+   Y LNFDEGP  DDPFS D   R+ ST FA I  S K
Sbjct: 80  KTFIRQFNKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFSDDLVRRDFSTRFAAIPASAK 139

Query: 61  SSMNLDKVESSFI 72
           SSM+L K    FI
Sbjct: 140 SSMDLGKDGPPFI 151

BLAST of MC06g1294 vs. NCBI nr
Match: XP_023533538.1 (uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.1 bits (157), Expect = 4.38e-11
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ R+ QS + Y+   Y LNFDEGP  DDPFS+D+  R+ S  FA I  S K
Sbjct: 81  KTFIRQFHKN-RHRQSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDGPSFI 152

BLAST of MC06g1294 vs. NCBI nr
Match: KAG6602448.1 (hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033131.1 hypothetical protein SDJN02_07184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.1 bits (157), Expect = 4.38e-11
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ R+ QS + Y+   Y LNFDEGP  DDPFS+D+  R+ S  FA I  S K
Sbjct: 81  KTFIRQFHKN-RHRQSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDGPSFI 152

BLAST of MC06g1294 vs. ExPASy TrEMBL
Match: A0A6J1C1N0 (uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006597 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.08e-15
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QFNKS RN QS F Y+   Y LNFDEGP+ DDPF +D+K R+ ST FA + +S K
Sbjct: 86  KTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAK 145

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 146 SSMDLGKDGLSFI 158

BLAST of MC06g1294 vs. ExPASy TrEMBL
Match: A0A0A0KRY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.75e-13
Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ RN QS F Y+   Y LNFDEGP  DDPF+ D+  R+ ST FA I  S K
Sbjct: 81  KTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFTDDFVRRDFSTRFAAIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDSPSFI 152

BLAST of MC06g1294 vs. ExPASy TrEMBL
Match: A0A6J1HFG4 (uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC111462557 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.12e-11
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ R+ QS + Y+   Y LNFDEGP  DDPFS+D+  R+ S  FA I  S K
Sbjct: 81  KTFIRQFHKN-RHRQSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDGPSFI 152

BLAST of MC06g1294 vs. ExPASy TrEMBL
Match: A0A6J1JTQ3 (uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.32e-10
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ R+ QS + Y+   Y LNFD+GP  DDPF +D+  R+ S  FA I  S K
Sbjct: 81  KTFIRQFHKN-RHRQSTYRYDPLSYALNFDDGPALDDPFREDFMRRDFSMRFASIPASAK 140

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   SFI
Sbjct: 141 SSMDLGKDGPSFI 152

BLAST of MC06g1294 vs. ExPASy TrEMBL
Match: A0A1S4E267 (uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.46e-10
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0

Query: 1   KSLIPQFNKSCRNCQSMFYYNSKCY-LNFDEGPLCDDPFSKDYKHRNLSTHFAVISTSTK 60
           K+ I QF+K+ RN QS F Y+   Y LNFDEGP  +D F+ D+  R+ ST FA I  S K
Sbjct: 80  KTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHEDSFTDDFVRRDFSTRFAAIPASAK 139

Query: 61  SSMNLDKVESSFI 72
           SSM+L K   S I
Sbjct: 140 SSMDLVKDSPSLI 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022134303.12.24e-1557.53uncharacterized protein LOC111006597 [Momordica charantia][more]
XP_031741765.11.39e-1254.79uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical ... [more]
XP_038889212.13.84e-1256.16uncharacterized protein LOC120079097 [Benincasa hispida][more]
XP_023533538.14.38e-1152.05uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo][more]
KAG6602448.14.38e-1152.05hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1C1N01.08e-1557.53uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A0A0KRY76.75e-1354.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1[more]
A0A6J1HFG42.12e-1152.05uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC1114625... [more]
A0A6J1JTQ33.32e-1049.32uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422... [more]
A0A1S4E2676.46e-1050.68uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1294.1MC06g1294.1mRNA