MC06g1277 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1277
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 19423417 .. 19423605 (+)
RNA-Seq Expression	MC06g1277
Synteny	MC06g1277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

mRNA sequence

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

Coding sequence (CDS)

GTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACT

Protein sequence

VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVRTST

Homology

[Close]

BLAST of MC06g1277 vs. NCBI nr
Match: PLY86165.1 (hypothetical protein LSAT_6X94260 [Lactuca sativa])

HSP 1 Score: 133 bits (335), Expect = 3.59e-38
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC06g1277 vs. NCBI nr
Match: KAG8363221.1 (hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia])

HSP 1 Score: 133 bits (335), Expect = 3.59e-38
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC06g1277 vs. NCBI nr
Match: KAG8369105.1 (hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia])

HSP 1 Score: 130 bits (327), Expect = 7.48e-37
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRPA KQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 98  VCLDLVPLSRPASKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 157

Query: 61  TST 63
           TST
Sbjct: 158 TST 160

[Close]

BLAST of MC06g1277 vs. NCBI nr
Match: KAF1876777.1 (hypothetical protein Lal_00043707 [Lupinus albus])

HSP 1 Score: 130 bits (327), Expect = 2.43e-35
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 231 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 290

Query: 61  TST 63
           TST
Sbjct: 291 TST 293

[Close]

BLAST of MC06g1277 vs. NCBI nr
Match: KAF1855277.1 (hypothetical protein Lal_00044973 [Lupinus albus])

HSP 1 Score: 130 bits (327), Expect = 5.73e-35
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 271 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 330

Query: 61  TST 63
           TST
Sbjct: 331 TST 333

[Close]

BLAST of MC06g1277 vs. ExPASy TrEMBL
Match: A0A2J6LFT8 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.74e-38
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 90  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 149

Query: 61  TST 63
           TST
Sbjct: 150 TST 152

[Close]

BLAST of MC06g1277 vs. ExPASy TrEMBL
Match: J3LNA6 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 1.25e-37
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
          VCLDLVPL++PAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 27 VCLDLVPLAQPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 86

Query: 61 TS 62
          TS
Sbjct: 87 TS 88

[Close]

BLAST of MC06g1277 vs. ExPASy TrEMBL
Match: I1QKX6 (Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 3.15e-37
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPL++PAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 58  VCLDLVPLAQPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 117

Query: 61  TS 62
           TS
Sbjct: 118 TS 119

[Close]

BLAST of MC06g1277 vs. ExPASy TrEMBL
Match: A0A2N9HQM6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41821 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 9.75e-36
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 365 VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 424

Query: 61  TST 63
           TST
Sbjct: 425 TST 427

[Close]

BLAST of MC06g1277 vs. ExPASy TrEMBL
Match: A0A6A5MTQ7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043707 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.18e-35
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1   VCLDLVPLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 60
           VCLDLV LSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR
Sbjct: 231 VCLDLVSLSRPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVR 290

Query: 61  TST 63
           TST
Sbjct: 291 TST 293

The following BLAST results are available for this feature:

BLAST of MC06g1277 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1277 vs. NCBI nr


Match Name	E-value	Identity	Description
PLY86165.1	3.59e-38	100.00	hypothetical protein LSAT_6X94260 [Lactuca sativa]	[more]
KAG8363221.1	3.59e-38	100.00	hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia]	[more]
KAG8369105.1	7.48e-37	98.41	hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia]	[more]
KAF1876777.1	2.43e-35	98.41	hypothetical protein Lal_00043707 [Lupinus albus]	[more]
KAF1855277.1	5.73e-35	98.41	hypothetical protein Lal_00044973 [Lupinus albus]	[more]

BLAST of MC06g1277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2J6LFT8	1.74e-38	100.00	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1	[more]
J3LNA6	1.25e-37	96.77	Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1	[more]
I1QKX6	3.15e-37	96.77	Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1	[more]
A0A2N9HQM6	9.75e-36	100.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41821 PE=4 SV=1	[more]
A0A6A5MTQ7	1.18e-35	98.41	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043707 PE=4 SV=1	[more]

BLAST of MC06g1277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1277.1	MC06g1277.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion