MC06g1215 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1215
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 16452607 .. 16452693 (+)
RNA-Seq ExpressionMC06g1215
SyntenyMC06g1215
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATACTGATGCGGCATGGCATGCAGGAAGAGGGCTCGGGTGGGTCTATCGAGATGAAAGAGGGAAAGTAATTAGGGCTGGGTGCAAA

mRNA sequence

AATACTGATGCGGCATGGCATGCAGGAAGAGGGCTCGGGTGGGTCTATCGAGATGAAAGAGGGAAAGTAATTAGGGCTGGGTGCAAA

Coding sequence (CDS)

AATACTGATGCGGCATGGCATGCAGGAAGAGGGCTCGGGTGGGTCTATCGAGATGAAAGAGGGAAAGTAATTAGGGCTGGGTGCAAA

Protein sequence

NTDAAWHAGRGLGWVYRDERGKVIRAGCK
Homology
[Close]
BLAST of MC06g1215 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 45.8 bits (107), Expect = 3.72e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+ GC+
Sbjct: 231 NTDAAWRADTNTDGIGWILRDEKGEVIKTGCR 262

[Close]
BLAST of MC06g1215 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 45.8 bits (107), Expect = 3.72e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+ GC+
Sbjct: 266 NTDAAWRADTNTDGIGWILRDEKGEVIKTGCR 297

[Close]
BLAST of MC06g1215 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 44.7 bits (104), Expect = 8.67e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+A C+
Sbjct: 90  NTDAAWRADTNTGGIGWILRDEKGEVIKADCR 121

[Close]
BLAST of MC06g1215 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.80e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+ GC+
Sbjct: 231 NTDAAWRADTNTDGIGWILRDEKGEVIKTGCR 262

[Close]
BLAST of MC06g1215 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.80e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+ GC+
Sbjct: 266 NTDAAWRADTNTDGIGWILRDEKGEVIKTGCR 297

[Close]
BLAST of MC06g1215 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.20e-04
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 1   NTDAAWHAGR---GLGWVYRDERGKVIRAGCK 29
           NTDAAW A     G+GW+ RDE+G+VI+A C+
Sbjct: 90  NTDAAWRADTNTGGIGWILRDEKGEVIKADCR 121

The following BLAST results are available for this feature:
BLAST of MC06g1215 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g1215 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154991.13.72e-0456.25uncharacterized protein LOC111022134 isoform X2 [Momordica charantia][more]
XP_022154990.13.72e-0456.25uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_022156777.18.67e-0456.25uncharacterized protein LOC111023608 [Momordica charantia][more]
BLAST of MC06g1215 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQC91.80e-0456.25uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DL641.80e-0456.25uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DSV14.20e-0456.25uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of MC06g1215 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1215.1MC06g1215.1mRNA