MC06g1133 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1133
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionBasic leucine zipper/W2 domain protein
LocationMC06: 12379841 .. 12380014 (-)
RNA-Seq ExpressionMC06g1133
SyntenyMC06g1133
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGAGAGAAGAACCCTGGCTTGAAGATCCTCTGGGTCTGGACTCTCGGCACCGCCGCCATTCTGGTTACAAGCGTAGCTCGGATGAGGATGCGGGATATGGAGACCATTATCAACTCTGATCAACAACAATCGCAGCCGCAACAAACGTTTCCTACTGATTCTCTTCCC

mRNA sequence

ATGGCGAGAGAGAAGAACCCTGGCTTGAAGATCCTCTGGGTCTGGACTCTCGGCACCGCCGCCATTCTGGTTACAAGCGTAGCTCGGATGAGGATGCGGGATATGGAGACCATTATCAACTCTGATCAACAACAATCGCAGCCGCAACAAACGTTTCCTACTGATTCTCTTCCC

Coding sequence (CDS)

ATGGCGAGAGAGAAGAACCCTGGCTTGAAGATCCTCTGGGTCTGGACTCTCGGCACCGCCGCCATTCTGGTTACAAGCGTAGCTCGGATGAGGATGCGGGATATGGAGACCATTATCAACTCTGATCAACAACAATCGCAGCCGCAACAAACGTTTCCTACTGATTCTCTTCCC

Protein sequence

MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP
Homology
BLAST of MC06g1133 vs. NCBI nr
Match: XP_022149993.1 (uncharacterized protein LOC111018274 [Momordica charantia])

HSP 1 Score: 117 bits (294), Expect = 7.87e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP 58
          MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP
Sbjct: 19 MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP 76

BLAST of MC06g1133 vs. NCBI nr
Match: XP_038878707.1 (uncharacterized protein LOC120070883 [Benincasa hispida])

HSP 1 Score: 93.6 bits (231), Expect = 6.03e-23
Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS-QPQQTFPTDSLP 58
          MAREK+PGLKILWVWTLGTAAIL+TSVARMRMRDME IINSDQQ S   QQT  TDS P
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILITSVARMRMRDMENIINSDQQPSLHHQQTSSTDSFP 59

BLAST of MC06g1133 vs. NCBI nr
Match: XP_022933307.1 (uncharacterized protein LOC111440489 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 3.14e-22
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS---QPQQTFPTDSL 57
          MAREK+PGLKILWVWTLGTAAILVTSVARMRMRDME+II SDQQQ    Q +QT  TDS 
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSSTDSF 60

BLAST of MC06g1133 vs. NCBI nr
Match: KAG7022194.1 (hypothetical protein SDJN02_15924, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.5 bits (223), Expect = 3.14e-22
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS---QPQQTFPTDSL 57
          MAREK+PGLKILWVWTLGTAAILVTSVARMRMRDME+II SDQQQ    Q +QT  TDS 
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSSTDSF 60

BLAST of MC06g1133 vs. NCBI nr
Match: KAG6588274.1 (hypothetical protein SDJN03_16839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 3.69e-22
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS---QPQQTFPTDSL 57
          MAREK+PGLKILWVWTLGTAAILVTSVARMRMRDME+II SDQQQ    Q +QT  TDS 
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSSTDSF 60

BLAST of MC06g1133 vs. ExPASy TrEMBL
Match: A0A6J1D892 (uncharacterized protein LOC111018274 OS=Momordica charantia OX=3673 GN=LOC111018274 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 3.81e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP 58
          MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP
Sbjct: 19 MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSLP 76

BLAST of MC06g1133 vs. ExPASy TrEMBL
Match: A0A6J1EZE2 (uncharacterized protein LOC111440489 OS=Cucurbita moschata OX=3662 GN=LOC111440489 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.52e-22
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS---QPQQTFPTDSL 57
          MAREK+PGLKILWVWTLGTAAILVTSVARMRMRDME+II SDQQQ    Q +QT  TDS 
Sbjct: 1  MAREKSPGLKILWVWTLGTAAILVTSVARMRMRDMESIIKSDQQQQSMHQQRQTSSTDSF 60

BLAST of MC06g1133 vs. ExPASy TrEMBL
Match: A0A6J1JH17 (uncharacterized protein LOC111485045 OS=Cucurbita maxima OX=3661 GN=LOC111485045 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.78e-21
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS-QPQQTFPTDSL 57
          MAR+K+PG+KILWVWTLGTAAILVTSVAR RMRDME +INSDQQ S   QQT  TDS 
Sbjct: 1  MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSSTDSF 58

BLAST of MC06g1133 vs. ExPASy TrEMBL
Match: A0A803R7D8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.66e-20
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSL 57
          M RE +PGLKILW+WT+GTAAILVTSV R RMRDMET +N+DQQ  Q  Q  PT+SL
Sbjct: 1  MPRETSPGLKILWIWTIGTAAILVTSVVRTRMRDMETFMNADQQNHQHHQNPPTESL 57

BLAST of MC06g1133 vs. ExPASy TrEMBL
Match: A0A7J6DSK6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029022 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.66e-20
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQSQPQQTFPTDSL 57
          M RE +PGLKILW+WT+GTAAILVTSV R RMRDMET +N+DQQ  Q  Q  PT+SL
Sbjct: 1  MPRETSPGLKILWIWTIGTAAILVTSVVRTRMRDMETFMNADQQNHQHHQNPPTESL 57

BLAST of MC06g1133 vs. TAIR 10
Match: AT1G06010.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-14
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 0

Query: 1  MAREKNPGLKILWVWTLGTAAILVTSVARMRMRDMETIINSDQQQS 47
          M REK+PGLKILWVWT+GTAAILVTSV R RM+DM+T++N +Q+Q+
Sbjct: 1  MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQA 46

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022149993.17.87e-33100.00uncharacterized protein LOC111018274 [Momordica charantia][more]
XP_038878707.16.03e-2383.05uncharacterized protein LOC120070883 [Benincasa hispida][more]
XP_022933307.13.14e-2280.00uncharacterized protein LOC111440489 [Cucurbita moschata][more]
KAG7022194.13.14e-2280.00hypothetical protein SDJN02_15924, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6588274.13.69e-2280.00hypothetical protein SDJN03_16839, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1D8923.81e-33100.00uncharacterized protein LOC111018274 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1EZE21.52e-2280.00uncharacterized protein LOC111440489 OS=Cucurbita moschata OX=3662 GN=LOC1114404... [more]
A0A6J1JH179.78e-2177.59uncharacterized protein LOC111485045 OS=Cucurbita maxima OX=3661 GN=LOC111485045... [more]
A0A803R7D85.66e-2070.18Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7J6DSK65.66e-2070.18Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029022 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G06010.14.6e-1471.74unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1133.1MC06g1133.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane