MC06g1123 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1123
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 12088314 .. 12088547 (+)
RNA-Seq ExpressionMC06g1123
SyntenyMC06g1123
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCATTTGGCTTGAGAAAGATTGTTATTTCTTGGAGGATTTATCTACTAAAGTCGTGTTGCCTTTGCAATCTCCTCATCTGGAATTGTTTGAAAAGCAACTTGTTGATTTATTGCAAGAACCTACACAAGCATATTTCTTCAAAAAAGAAAGAGATGGAATGGGAACATGCAGAATTCATAAGCTCAGATCTGATTCAAGATTGTTTATTGAATGCACTGTTTGGCTTCTGTCG

mRNA sequence

TGCATTTGGCTTGAGAAAGATTGTTATTTCTTGGAGGATTTATCTACTAAAGTCGTGTTGCCTTTGCAATCTCCTCATCTGGAATTGTTTGAAAAGCAACTTGTTGATTTATTGCAAGAACCTACACAAGCATATTTCTTCAAAAAAGAAAGAGATGGAATGGGAACATGCAGAATTCATAAGCTCAGATCTGATTCAAGATTGTTTATTGAATGCACTGTTTGGCTTCTGTCG

Coding sequence (CDS)

TGCATTTGGCTTGAGAAAGATTGTTATTTCTTGGAGGATTTATCTACTAAAGTCGTGTTGCCTTTGCAATCTCCTCATCTGGAATTGTTTGAAAAGCAACTTGTTGATTTATTGCAAGAACCTACACAAGCATATTTCTTCAAAAAAGAAAGAGATGGAATGGGAACATGCAGAATTCATAAGCTCAGATCTGATTCAAGATTGTTTATTGAATGCACTGTTTGGCTTCTGTCG

Protein sequence

CIWLEKDCYFLEDLSTKVVLPLQSPHLELFEKQLVDLLQEPTQAYFFKKERDGMGTCRIHKLRSDSRLFIECTVWLLS
Homology
[Close]
BLAST of MC06g1123 vs. NCBI nr
Match: TYK02777.1 (Transposon TX1 uncharacterized [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 9.99e-05
Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 0 

Query: 1  CIWLEKDCYFLEDLSTKVVLPLQSPHLELFEKQLVDLLQEPTQAYFFKKERDGMGTCRIH 60
          CIWLEK  + +ED+  + ++ L    LE F   +  L++EP   +F K   D  G  R+ 
Sbjct: 13 CIWLEKGQFHIEDVDFQKIISLSKTQLEWFTNSIAVLVKEPAWKFFSKSGNDDAGITRLS 72

Query: 61 KLRSDSRLFIE 71
          K ++ S  F+ 
Sbjct: 73 KFQTPSGWFLS 83

[Close]
BLAST of MC06g1123 vs. ExPASy TrEMBL
Match: A0A5D3BTI0 (Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00360 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.84e-05
Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 0 

Query: 1  CIWLEKDCYFLEDLSTKVVLPLQSPHLELFEKQLVDLLQEPTQAYFFKKERDGMGTCRIH 60
          CIWLEK  + +ED+  + ++ L    LE F   +  L++EP   +F K   D  G  R+ 
Sbjct: 13 CIWLEKGQFHIEDVDFQKIISLSKTQLEWFTNSIAVLVKEPAWKFFSKSGNDDAGITRLS 72

Query: 61 KLRSDSRLFIE 71
          K ++ S  F+ 
Sbjct: 73 KFQTPSGWFLS 83

The following BLAST results are available for this feature:
BLAST of MC06g1123 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g1123 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02777.19.99e-0532.39Transposon TX1 uncharacterized [Cucumis melo var. makuwa][more]
BLAST of MC06g1123 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BTI04.84e-0532.39Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of MC06g1123 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1123.1MC06g1123.1mRNA