MC06g1057 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1057
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 10275196 .. 10275348 (+)
RNA-Seq ExpressionMC06g1057
SyntenyMC06g1057
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGAATCGGATTGTCTTGAAGTTATTAATATCATCAACAAAGATGGTGTAGATCTCACCGAAAGAAACGTGATCATTGAAGACATTTGGAGGGAGGTAGATTCGTTGTCAATTGAAAGGCTTCAGTCATATCCCGAGGAGAGCAAACGAAGT

mRNA sequence

GTGGAATCGGATTGTCTTGAAGTTATTAATATCATCAACAAAGATGGTGTAGATCTCACCGAAAGAAACGTGATCATTGAAGACATTTGGAGGGAGGTAGATTCGTTGTCAATTGAAAGGCTTCAGTCATATCCCGAGGAGAGCAAACGAAGT

Coding sequence (CDS)

GTGGAATCGGATTGTCTTGAAGTTATTAATATCATCAACAAAGATGGTGTAGATCTCACCGAAAGAAACGTGATCATTGAAGACATTTGGAGGGAGGTAGATTCGTTGTCAATTGAAAGGCTTCAGTCATATCCCGAGGAGAGCAAACGAAGT

Protein sequence

VESDCLEVINIINKDGVDLTERNVIIEDIWREVDSLSIERLQSYPEESKRS
Homology
[Close]
BLAST of MC06g1057 vs. NCBI nr
Match: XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 1.61e-07
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1   VESDCLEVINIINKDGVDLTERNVIIEDIWREVDSLSIERLQSYP 45
           +ESDCLEV+NIINK  + LTE ++I+EDIW+E++SL IE  +  P
Sbjct: 137 MESDCLEVVNIINKSSMVLTEVSLIVEDIWKEMESLPIEGFKHLP 181

[Close]
BLAST of MC06g1057 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.79e-08
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1   VESDCLEVINIINKDGVDLTERNVIIEDIWREVDSLSIERLQSYP 45
           +ESDCLEV+NIINK  + LTE ++I+EDIW+E++SL IE  +  P
Sbjct: 137 MESDCLEVVNIINKSSMVLTEVSLIVEDIWKEMESLPIEGFKHLP 181

The following BLAST results are available for this feature:
BLAST of MC06g1057 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g1057 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022148549.11.61e-0757.78uncharacterized protein LOC111017181 [Momordica charantia][more]
BLAST of MC06g1057 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D4B67.79e-0857.78uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
BLAST of MC06g1057 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1057.1MC06g1057.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity