MC06g0999 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0999
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein At3g07870-like
LocationMC06: 8987177 .. 8988171 (+)
RNA-Seq ExpressionMC06g0999
SyntenyMC06g0999
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAGTCGTCGGCTGGTGTGTAAAGCATGGAATAATTTGGTCTTAACTTGTAAGTTCCATCCTTCAATCTCAATTTCCAATGTGTTTTTTGCCAATATTTTTCCGTGCGATCCCAATCTCCATTGCGTAGACGTGAGAGGGATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGAGTCTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAGTCTCTTATAACCCTAAGAATGAGAGGATGAAGTTATTGACACAAGGCCAAGACCTTAGAATAACTGCTCTTCATCCAATTGACTCTTTCAATTTA

mRNA sequence

CCCAGTCGTCGGCTGGTGTGTAAAGCATGGAATAATTTGGTCTTAACTTGTAAGTTCCATCCTTCAATCTCAATTTCCAATGTGTTTTTTGCCAATATTTTTCCGTGCGATCCCAATCTCCATTGCGTAGACGTGAGAGGGATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGACTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAGTCTCTTATAACCCTAAGAATGAGAGGATGAAGTTATTGACACAAGGCCAAGACCTTAGAATAACTGCTCTTCATCCAATTGACTCTTTCAATTTA

Coding sequence (CDS)

CCCAGTCGTCGGCTGGTGTGTAAAGCATGGAATAATTTGGTCTTAACTTGTAAGTTCCATCCTTCAATCTCAATTTCCAATGTGTTTTTTGCCAATATTTTTCCGTGCGATCCCAATCTCCATTGCGTAGACGTGAGAGGGATGAGCACTGTTGCCTCGTTTAGCTTCCATTCTAATTTTCCCTCTGCCAGTATCTCTATTGTCAATTCATGCAATGGACTCCTCTGTTGTTATCTTGGCCATGGAAGAACCAAAACGCTACCTTGTAAAGCTTTCATATCCAAAATGCCACCCGGTGAAGCTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCGCCCATCTCGGATGCAGATAAGGATATATGGCAGTATTATTTTTATGGATTTGGGTTTAGTCCTAAGACAAAGCAGTACAAATTAGCAAGATTCTCCTTTGTTCGGGACAAACTTGCTACCTTGGTGGAGATTTTCACATTTGGCACAACTCACAAATGGACCTCTCTTGGCTTTCTGCCTCCATATGTGAGAATGGAAGAACATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAACTCACTTACAACTACCTGTTACAAAGGTCATATACAGTTTGGATATAGAAGAGGAGAAATTCCAAGAAATTTCTTTTCCTCATCGTGTTTGTTATTGTTGTTTCATTGGAGTCTTTAATGGCGCCCTCTTGCTTATCCTGGATTACGTGTACCGCGTGTGGAAGATGGAAGAAGATTTTTCGTGGACCAAAGCTTTTGATATTTTCATACCAAATCAATACTTGCATCAAGGATGTGGACGACCATTTAACCTTCAACTTATTAGACTTGGGAACATGTTATGTCTTATTTCTCATATTTTTGAATTCTATTTAGTCTCTTATAACCCTAAGAATGAGAGGATGAAGTTATTGACACAAGGCCAAGACCTTAGAATAACTGCTCTTCATCCAATTGACTCTTTCAATTTA

Protein sequence

PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPCDPNLHCVDVRGMSTVASFSFHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHRVCYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFNLQLIRLGNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITALHPIDSFNL
Homology
BLAST of MC06g0999 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.8e-09
Identity = 88/362 (24.31%), Postives = 145/362 (40.06%), Query Frame = 0

Query: 6   VCKAWNNLVLTCKFHPSISISNVFFANIFPCDP----NLHCVDV-----RGMSTVASFSF 65
           VC++W +++       S S S      +  CD      LH +D+     R  +   +  F
Sbjct: 51  VCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRF 110

Query: 66  HSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKPP 125
            S+ P     +V SCNGLLC                   +     ++ NP  TN    P 
Sbjct: 111 ASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELPE 170

Query: 126 ISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEIF 185
            S+   D  Q   +GFGF   TK+YK+ +  + R   +                + V+I 
Sbjct: 171 CSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQIL 230

Query: 186 TFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEK 245
           T  +     +  W SLG  P            NG L++V    +    +   S D+E+E+
Sbjct: 231 TLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEE 290

Query: 246 FQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKAF 305
           F+EI  P         HR+     C C  +    G L +   +V + + ++E  SW K +
Sbjct: 291 FKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKEY 350

Query: 306 DI--FIPNQYLHQGCGRPF----NLQLIRLGNMLCLISH---IFEF---YLVSYNPKNER 311
            I  ++P + L Q   RP     N +  ++  +LCL+ +   + E+    LV+Y+PK  +
Sbjct: 351 SIGTYLP-KGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGK 387

BLAST of MC06g0999 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 326 bits (835), Expect = 2.00e-106
Identity = 192/348 (55.17%), Postives = 224/348 (64.37%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISN-VFFANIFPCDPNLHCVDVR-----GMSTVASF 60
           PS RLVCKAW+++VLT K HPSISISN +F A+ +  DPNL C+ +      GM  VA F
Sbjct: 35  PSCRLVCKAWSDVVLTGKLHPSISISNHLFLAHDYLFDPNLQCLHLDPKYLGGMCNVAKF 94

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGE---AFILNPMTN 120
            FH +F  +S  ISIVN CNGLLCC   H  TK          MPP E     ILNPMTN
Sbjct: 95  RFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTK----------MPPYENVEVCILNPMTN 154

Query: 121 EYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTS 180
           EYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF +  DK A L+E FTFGT  K T 
Sbjct: 155 EYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFGTNCKSTY 214

Query: 181 LGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHRVCYCCF 240
           +  +P  + MEEH VYFNG LYW+G  L+ P T V+Y LDIE+E+ QEISFP     CC 
Sbjct: 215 VSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFPQSGG-CCS 274

Query: 241 IGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFNLQLIRL- 300
           IGVFNG+L L L     + Y VWKMEEDFSWTKAFD+ +P  Y+H        LQLIR  
Sbjct: 275 IGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLIRAC 334

Query: 301 --GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITALHPIDSFN 330
             G +LCLIS +    L+ YN K +RM+ LT  Q L I  +H IDSFN
Sbjct: 335 DDGKILCLISGLD---LILYNSKTQRMESLTY-QHLNIKKVHRIDSFN 365

BLAST of MC06g0999 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 278 bits (712), Expect = 9.23e-88
Identity = 174/357 (48.74%), Postives = 222/357 (62.18%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPC-DPNLHCVDV-----RGMSTVASF 60
           P+ RLV   WNNLVL+CKF PSISISN+FFA+ + C D NLHCVD+      GMSTVASF
Sbjct: 34  PTCRLVSATWNNLVLSCKFDPSISISNLFFAHFYSCRDRNLHCVDLDPQHLEGMSTVASF 93

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYF 120
           +FH N  S S  ISI+NSC+GL+   +   R +            PG   +LNPMTNEYF
Sbjct: 94  TFHPNVSSGSCKISIINSCSGLISLLITKRRRRG---------HRPGVVCVLNPMTNEYF 153

Query: 121 KPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTSLGF 180
           K P   +  D  + YFYG GFSP+TKQYKLAR  +V  +   +VEIF FGT+ +WT +G 
Sbjct: 154 KLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEF--IVEIFAFGTSCEWTPVGS 213

Query: 181 LPPYVRMEEHGVYFNGGLYWVGTHLQLP---VTKVIYSLDIEEEKFQEISFP---HRVCY 240
           +P ++  E HGVYFNGGLYWVG   QLP   ++ VIY LD+E++KF++ISFP        
Sbjct: 214 VPYFLN-EYHGVYFNGGLYWVGGQ-QLPNAGLSDVIYRLDLEDDKFKQISFPLDGDDEGD 273

Query: 241 CCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRP----FNL 300
             +IGV+N  L L L   D+ Y VWKMEEDFSW K F + +P   +H    R     + L
Sbjct: 274 FPYIGVYNDTLYLTLCCGDFEYHVWKMEEDFSWIKEFVLALPEN-VHHSLPRHHPIGYCL 333

Query: 301 QLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITA---LHPIDSFN 330
           QLI+    GN+LCL + +   YL+ Y+PK E  +LLT  QD  I     ++ IDSFN
Sbjct: 334 QLIKACEDGNILCLCAGL---YLILYDPKTETTELLTD-QDFEIKKHMWVYQIDSFN 372

BLAST of MC06g0999 vs. NCBI nr
Match: XP_022154078.1 (F-box/LRR-repeat protein At2g43260-like [Momordica charantia])

HSP 1 Score: 270 bits (689), Expect = 4.21e-86
Identity = 142/224 (63.39%), Postives = 161/224 (71.88%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPCDPNLHCVDVRGMSTVASFSFHSNF 60
           PS RLVCKAWNNLVLTC  HP IS S++FF +I P D NL  +D+ G S+VASFSFHSNF
Sbjct: 32  PSCRLVCKAWNNLVLTCNSHPPISSSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNF 91

Query: 61  PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYFKPPISDAD 120
           P ASISI++SCNGLLCCYL H RT            PP E FILNPMTNEYFKPP S+AD
Sbjct: 92  PFASISIIDSCNGLLCCYLVHERTAR----------PPREPFILNPMTNEYFKPPFSNAD 151

Query: 121 KDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KWTSLGFLPPYVRM 180
             +W YY +GFGFS KTKQYKL R SF  +K ATLVEIFT GT+  KW  +GFLPP + M
Sbjct: 152 --VW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFLPPDMTM 211

Query: 181 EEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 223
            + GVYFNGGLYWV        T V+Y LDIE+E+  EISFP R
Sbjct: 212 XDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241

BLAST of MC06g0999 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 270 bits (689), Expect = 2.68e-84
Identity = 169/357 (47.34%), Postives = 212/357 (59.38%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPCDPNLHCVD-----VRGMSTVASFS 60
           PS RLVCKAWNNLVLTCKF P + IS++  A   P   NL+C+D     + GMS+V SF+
Sbjct: 36  PSCRLVCKAWNNLVLTCKFDPPLLISSLSLAYDCP-SRNLYCMDFNLKYLEGMSSVVSFT 95

Query: 61  FHSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAF-----ILNPMTNE 120
           FH  F ++SISI+NSCNGLL                 ISK   G        ILNPMTNE
Sbjct: 96  FHPKFFTSSISIINSCNGLL--------------SLLISKRKSGSPISYVLCILNPMTNE 155

Query: 121 YFKPPISDADKDIW--QYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWT 180
           YFK P   +       + Y YG GFSP+TKQYK+AR SF+RD+  T VEIF FGTT +WT
Sbjct: 156 YFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFAFGTTREWT 215

Query: 181 SLGFLPPYVRMEEHGVYFNGGLYWVGTHLQ-LPVTKVIYSLDIEEEKFQEISFPHRVCYC 240
            +G LP  V +E+HGVYFNGGLYW    LQ       IY LDIE EK ++IS PH     
Sbjct: 216 PVGVLPSLV-VEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKISCPHYGGGH 275

Query: 241 CFIGVFNGALLLI-----LDYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFN---L 300
            F GVF+G L L      +D +Y+VWKMEE+ SW KAF +  P    H    +P+    L
Sbjct: 276 FFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHDQPWGVSQL 335

Query: 301 QLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDL---RITALHPIDSFN 330
           Q I++   G +LCL++    F L+ Y+PK +R+K+LT  QD+   R   +H IDS N
Sbjct: 336 QPIKVCEDGKILCLLA---GFLLILYDPKTKRVKILT-NQDVETERHLHVHQIDSSN 372

BLAST of MC06g0999 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 255 bits (651), Expect = 1.34e-78
Identity = 158/359 (44.01%), Postives = 212/359 (59.05%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPC-DPNLHCVD-----VRGMSTVASF 60
           P+ RLV   WNNL+ +CKF PSISIS++FFA  +    PNLHCV+       GMSTVASF
Sbjct: 34  PTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEFDPQHAEGMSTVASF 93

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTK----TLPCKAFISKMPPGEAFILNPMT 120
           +FH +  S S  I+I+NSC+GL+   +   R +     L C             +LNP+T
Sbjct: 94  AFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVC-------------VLNPIT 153

Query: 121 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWT 180
           NEYFK P S +  D    Y YG GFSP T QYKLAR  F  D+   +V+IF FGT+ +WT
Sbjct: 154 NEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEF--IVDIFAFGTSCEWT 213

Query: 181 SLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKFQEISFPH 240
            +G +P ++  E HGVY NGGLYWVG+  +LP       T+VIY LD+++EKF++ISFP 
Sbjct: 214 PVGSVPNFLN-EYHGVYLNGGLYWVGSQ-KLPNGGISDYTEVIYRLDLKDEKFEKISFPL 273

Query: 241 RVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRP--F 300
                 +I V+NG L L     D+ Y  WKMEEDFSW+K F + +P    H     P  +
Sbjct: 274 DGGDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHHPIGY 333

Query: 301 NLQLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITA---LHPIDSFN 330
            LQLI+    GN+LCL + I    L+ Y+P  + +++LT  QD  I     +H I+SF+
Sbjct: 334 YLQLIKFCEDGNILCLYAGIL---LILYDPSTQTVEILT-NQDFEIKEAMWVHQIESFS 371

BLAST of MC06g0999 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 9.68e-107
Identity = 192/348 (55.17%), Postives = 224/348 (64.37%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISN-VFFANIFPCDPNLHCVDVR-----GMSTVASF 60
           PS RLVCKAW+++VLT K HPSISISN +F A+ +  DPNL C+ +      GM  VA F
Sbjct: 35  PSCRLVCKAWSDVVLTGKLHPSISISNHLFLAHDYLFDPNLQCLHLDPKYLGGMCNVAKF 94

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGE---AFILNPMTN 120
            FH +F  +S  ISIVN CNGLLCC   H  TK          MPP E     ILNPMTN
Sbjct: 95  RFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTK----------MPPYENVEVCILNPMTN 154

Query: 121 EYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWTS 180
           EYFKPPIS+A KD W YY Y FGFSPKTKQYKL RF +  DK A L+E FTFGT  K T 
Sbjct: 155 EYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFGTNCKSTY 214

Query: 181 LGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHRVCYCCF 240
           +  +P  + MEEH VYFNG LYW+G  L+ P T V+Y LDIE+E+ QEISFP     CC 
Sbjct: 215 VSCVPSSMSMEEHSVYFNGSLYWIGKQLKHP-TNVLYRLDIEKEELQEISFPQSGG-CCS 274

Query: 241 IGVFNGALLLILD----YVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRPFNLQLIRL- 300
           IGVFNG+L L L     + Y VWKMEEDFSWTKAFD+ +P  Y+H        LQLIR  
Sbjct: 275 IGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLIRAC 334

Query: 301 --GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITALHPIDSFN 330
             G +LCLIS +    L+ YN K +RM+ LT  Q L I  +H IDSFN
Sbjct: 335 DDGKILCLISGLD---LILYNSKTQRMESLTY-QHLNIKKVHRIDSFN 365

BLAST of MC06g0999 vs. ExPASy TrEMBL
Match: A0A6J1DJA3 (F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111021424 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 2.04e-86
Identity = 142/224 (63.39%), Postives = 161/224 (71.88%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPCDPNLHCVDVRGMSTVASFSFHSNF 60
           PS RLVCKAWNNLVLTC  HP IS S++FF +I P D NL  +D+ G S+VASFSFHSNF
Sbjct: 32  PSCRLVCKAWNNLVLTCNSHPPISSSSLFFIHISPQDSNLQGIDMGGRSSVASFSFHSNF 91

Query: 61  PSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPMTNEYFKPPISDAD 120
           P ASISI++SCNGLLCCYL H RT            PP E FILNPMTNEYFKPP S+AD
Sbjct: 92  PFASISIIDSCNGLLCCYLVHERTAR----------PPREPFILNPMTNEYFKPPFSNAD 151

Query: 121 KDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTH-KWTSLGFLPPYVRM 180
             +W YY +GFGFS KTKQYKL R SF  +K ATLVEIFT GT+  KW  +GFLPP + M
Sbjct: 152 --VW-YYCFGFGFSLKTKQYKLTRLSFAWEKHATLVEIFTLGTSRSKWNPVGFLPPDMTM 211

Query: 181 EEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEKFQEISFPHR 223
            + GVYFNGGLYWV        T V+Y LDIE+E+  EISFP R
Sbjct: 212 XDDGVYFNGGLYWVANQ-PFGRTNVMYRLDIEDEELLEISFPQR 241

BLAST of MC06g0999 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 6.51e-79
Identity = 158/359 (44.01%), Postives = 212/359 (59.05%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPC-DPNLHCVD-----VRGMSTVASF 60
           P+ RLV   WNNL+ +CKF PSISIS++FFA  +    PNLHCV+       GMSTVASF
Sbjct: 34  PTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEFDPQHAEGMSTVASF 93

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLGHGRTK----TLPCKAFISKMPPGEAFILNPMT 120
           +FH +  S S  I+I+NSC+GL+   +   R +     L C             +LNP+T
Sbjct: 94  AFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVC-------------VLNPIT 153

Query: 121 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWT 180
           NEYFK P S +  D    Y YG GFSP T QYKLAR  F  D+   +V+IF FGT+ +WT
Sbjct: 154 NEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEF--IVDIFAFGTSCEWT 213

Query: 181 SLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKFQEISFPH 240
            +G +P ++  E HGVY NGGLYWVG+  +LP       T+VIY LD+++EKF++ISFP 
Sbjct: 214 PVGSVPNFLN-EYHGVYLNGGLYWVGSQ-KLPNGGISDYTEVIYRLDLKDEKFEKISFPL 273

Query: 241 RVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQGCGRP--F 300
                 +I V+NG L L     D+ Y  WKMEEDFSW+K F + +P    H     P  +
Sbjct: 274 DGGDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHHPIGY 333

Query: 301 NLQLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITA---LHPIDSFN 330
            LQLI+    GN+LCL + I    L+ Y+P  + +++LT  QD  I     +H I+SF+
Sbjct: 334 YLQLIKFCEDGNILCLYAGIL---LILYDPSTQTVEILT-NQDFEIKEAMWVHQIESFS 371

BLAST of MC06g0999 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 7.33e-78
Identity = 157/360 (43.61%), Postives = 215/360 (59.72%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPC-DPNLHCVD-----VRGMSTVASF 60
           P+ RLV + WNNL+ +CKF PS SI ++FFA  +     NLHCV+     V GMS VASF
Sbjct: 33  PTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEFDPQHVEGMSIVASF 92

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLG----HGRTKTLPCKAFISKMPPGEAFILNPMT 120
           +FH +F SAS  I+I+NSC+GL+   +      G+ + + C             +LNP+T
Sbjct: 93  AFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC-------------VLNPIT 152

Query: 121 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWT 180
           NEYFK P      D    Y YG GFSPKT QYKLAR  F  ++   +V+IF FGT+ +WT
Sbjct: 153 NEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAFGTSCEWT 212

Query: 181 SLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKFQEISFPH 240
            +G +P ++  E HGVYFNGGLYWVG+  QLP       T V+Y LD+ +EKF++IS P 
Sbjct: 213 PIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPF 272

Query: 241 RVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQ-GCGRP-- 300
                 ++GV+NG L L L   D+ Y VWKM+EDFSW+K F + +P   LH      P  
Sbjct: 273 GGDEP-YVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILHSLHRHHPIG 332

Query: 301 FNLQLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITA---LHPIDSFN 330
           + LQL++    G++LCL + I    L+ Y+PK ++M++LT  QD  I      H I+SF+
Sbjct: 333 YYLQLVKFCEDGSILCLCAGIL---LIVYDPKTQQMEILTD-QDFEIKEGMWFHQIESFS 371

BLAST of MC06g0999 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 7.33e-78
Identity = 157/360 (43.61%), Postives = 215/360 (59.72%), Query Frame = 0

Query: 1   PSRRLVCKAWNNLVLTCKFHPSISISNVFFANIFPC-DPNLHCVD-----VRGMSTVASF 60
           P+ RLV + WNNL+ +CKF PS SI ++FFA  +     NLHCV+     V GMS VASF
Sbjct: 33  PTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEFDPQHVEGMSIVASF 92

Query: 61  SFHSNFPSAS--ISIVNSCNGLLCCYLG----HGRTKTLPCKAFISKMPPGEAFILNPMT 120
           +FH +F SAS  I+I+NSC+GL+   +      G+ + + C             +LNP+T
Sbjct: 93  AFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVC-------------VLNPIT 152

Query: 121 NEYFKPPISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLATLVEIFTFGTTHKWT 180
           NEYFK P      D    Y YG GFSPKT QYKLAR  F  ++   +V+IF FGT+ +WT
Sbjct: 153 NEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEF--IVDIFAFGTSCEWT 212

Query: 181 SLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLP------VTKVIYSLDIEEEKFQEISFPH 240
            +G +P ++  E HGVYFNGGLYWVG+  QLP       T V+Y LD+ +EKF++IS P 
Sbjct: 213 PIGSVPNFLN-EYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPF 272

Query: 241 RVCYCCFIGVFNGALLLIL---DYVYRVWKMEEDFSWTKAFDIFIPNQYLHQ-GCGRP-- 300
                 ++GV+NG L L L   D+ Y VWKM+EDFSW+K F + +P   LH      P  
Sbjct: 273 GGDEP-YVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILHSLHRHHPIG 332

Query: 301 FNLQLIRL---GNMLCLISHIFEFYLVSYNPKNERMKLLTQGQDLRITA---LHPIDSFN 330
           + LQL++    G++LCL + I    L+ Y+PK ++M++LT  QD  I      H I+SF+
Sbjct: 333 YYLQLVKFCEDGSILCLCAGIL---LIVYDPKTQQMEILTD-QDFEIKEGMWFHQIESFS 371

BLAST of MC06g0999 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-10
Identity = 88/362 (24.31%), Postives = 145/362 (40.06%), Query Frame = 0

Query: 6   VCKAWNNLVLTCKFHPSISISNVFFANIFPCDP----NLHCVDV-----RGMSTVASFSF 65
           VC++W +++       S S S      +  CD      LH +D+     R  +   +  F
Sbjct: 51  VCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRF 110

Query: 66  HSNFPSASISIVNSCNGLLCCYLGHGRTKTLPCKAFISKMPPGEAFILNPM-TNEYFKPP 125
            S+ P     +V SCNGLLC                   +     ++ NP  TN    P 
Sbjct: 111 ASSMP--EFDVVGSCNGLLC---------------LSDSLYNDSLYLYNPFTTNSLELPE 170

Query: 126 ISDADKDIWQYYFYGFGFSPKTKQYKLARFSFVRDKLA----------------TLVEIF 185
            S+   D  Q   +GFGF   TK+YK+ +  + R   +                + V+I 
Sbjct: 171 CSNKYHD--QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQIL 230

Query: 186 TFGT-----THKWTSLGFLPPYVRMEEHGVYFNGGLYWVGTHLQLPVTKVIYSLDIEEEK 245
           T  +     +  W SLG  P            NG L++V    +    +   S D+E+E+
Sbjct: 231 TLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEE 290

Query: 246 FQEISFP---------HRV-----CYCCFIGVFNGALLLILDYVYRVWKMEEDFSWTKAF 305
           F+EI  P         HR+     C C  +    G L +   +V + + ++E  SW K +
Sbjct: 291 FKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDI---WVMKTYGVKE--SWGKEY 350

Query: 306 DI--FIPNQYLHQGCGRPF----NLQLIRLGNMLCLISH---IFEF---YLVSYNPKNER 311
            I  ++P + L Q   RP     N +  ++  +LCL+ +   + E+    LV+Y+PK  +
Sbjct: 351 SIGTYLP-KGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGK 387

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SFC73.8e-0924.31F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_022143297.12.00e-10655.17F-box/kelch-repeat protein At3g06240-like [Momordica charantia][more]
XP_038880514.19.23e-8848.74putative F-box protein At1g46984 [Benincasa hispida][more]
XP_022154078.14.21e-8663.39F-box/LRR-repeat protein At2g43260-like [Momordica charantia][more]
XP_038883771.12.68e-8447.34putative F-box protein At1g60370 [Benincasa hispida][more]
XP_004135796.11.34e-7844.01putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
A0A6J1CQE29.68e-10755.17F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1DJA32.04e-8663.39F-box/LRR-repeat protein At2g43260-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0M1M56.51e-7944.01F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A5D3CIX97.33e-7843.61Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV87.33e-7843.61putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT3G07870.12.7e-1024.31F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 70..306
e-value: 1.0E-19
score: 68.8
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 3..284
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 3..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0999.1MC06g0999.1mRNA