MC06g0983 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0983
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box protein
Location	MC06: 8786144 .. 8786771 (+)
RNA-Seq Expression	MC06g0983
Synteny	MC06g0983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCACCTATATTTGGTGGATTTTCTTCACACAACATCTCAGAAGCCACTCAAGGGAAATTTTCACTTCTCAATGTCACCGTATGATGTGGTAGGTTTTTCTGATGTCTTGTTCTGTTTATCCAATTCTCTTTACTACGTTAAGTTCTTTATATATTACCCCTTTACGAGAGACTAGGAGCGGCCTAAAACCAAGGAATTTTTTAACCCTGGTGTGGTGTATGGGATTAGATTTCACCCACAAACAAACTAAAATTGTGTACTCTCTAGGGTTTCGTAGGGTTTCGTTGGATTGAGAGATACTCTTATCTCCACTCGAAGGTTCAAATTTTCACTCTTGGAACCTCCAATTGGAGGAGCATTGGCAAATTTGCCACTGTCCGGCCTAGTGGAGTCAATGACAAACTCCACTAGGTATCTTTGTCGTGGCGGCACAACCTCGGCCGTAGCCTCATGTCGTTCGACTTGGCCGACAAGCAATTTTAGGAAATTCCAAAGTCGGAATTGGGGACCTTGAGCCGATGCAGTTACCATTCGGTGATTCTTGACGAGTGCCTCTTCGCTGTGGCCTACTAAAACTACGGGAAAATGGAGAGATATGGGTGATGAAAGAGTACGGGGCGAAAGAA

mRNA sequence

CATCACCTATATTTGGTGGATTTTCTTCACACAACATCTCAGAAGCCACTCAAGGGAAATTTTCACTTCTCAATGTCACCGTATGATGTGGTAGGTTTTTCTGATGTCTTGTTCTGTTTATCCAATTCTCTTTACTACGTTAAGTTCTTTATATATTACCCCTTTACGAGAGACTAGGAGCGGCCTAAAACCAAGGAATTTTTTAACCCTGGTGTGGTGTATGGGATTAGATTTCACCCACAAACAAACAAAATTGTGTACTCTCTAGGGTTTCGTAGGGTTCGTTGGATTGAGAGATACTCTTATCTCCACTCGAAGGTTCAAATTTTCACTCTTGGAACCTCCAATTGGAGGAGCATTGGCAAATTTGCCACTGTCCGGCCTAGTGGAGTCAATGACAAACTCCACTAGGTATCTTTGTCGTGGCGGCACAACCTCGGCCGTAGCCTCATGTCGTTCGACTTGGCCGACAAGCAATTTTAGGAAATTCCAAAGTCGGAATTGGGGACCTTGAGCCGATGCAGTTACCATTCGGTGATTCTTGACGAGTGCCTCTTCGCTGTGGCCTACCTACGGGAAAATGGAGAGATATGGGTGATGAAAGAGTACGGGGCGAAAGAA

Coding sequence (CDS)

CATCACCTATATTTGGTGGATTTTCTTCACACAACATCTCAGAAGCCACTCAAGGGAAATTTTCACTTCTCAATGTCACCGTATGATGTGGTAGGTTTTTCTGATGTCTTGTTCTGTTTATCCAATTCTCTTTACTACGTTAAGTTCTTTATATATTACCCCTTTACGAGAGACTAGGAGCGGCCTAAAACCAAGGAATTTTTTAACCCTGGTGTGGTGTATGGGATTAGATTTCACCCACAAACAAACAAAATTGTGTACTCTCTAGGGTTTCGTAGGGTTCGTTGGATTGAGAGATACTCTTATCTCCACTCGAAGGTTCAAATTTTCACTCTTGGAACCTCCAATTGGAGGAGCATTGGCAAATTTGCCACTGTCCGGCCTAGTGGAGTCAATGACAAACTCCACTAGGTATCTTTGTCGTGGCGGCACAACCTCGGCCGTAGCCTCATGTCGTTCGACTTGGCCGACAAGCAATTTTAGGAAATTCCAAAGTCGGAATTGGGGACCTTGAGCCGATGCAGTTACCATTCGGTGATTCTTGACGAGTGCCTCTTCGCTGTGGCCTACCTACGGGAAAATGGAGAGATATGGGTGATGAAAGAGTACGGGGCGAAAGAA

Protein sequence

HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDUERPKTKEFFNPGVVYGIRFHPQTNKIVYSLGFRRVRWIERYSYLHSKVQIFTLGTSNWRSIGKFATVRPSGVNDKLHUVSLSWRHNLGRSLMSFDLADKQFUEIPKSELGTLSRCSYHSVILDECLFAVAYLRENGEIWVMKEYGAKE

Homology

[Close]

BLAST of MC06g0983 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25
Identity = 87/231 (37.66%), Postives = 116/231 (50.22%), Query Frame = 0


Query: 1   HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDX 60
           H L L +       K     F  SM  +DVVG  + L CLS+SLY    ++Y PF T   
Sbjct: 90  HFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSL 149

Query: 61  ERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR-----VRWIERYSYLHSKVQ 120
           E P+ + ++ +  +V+G  FH  T      KIVY  G         R   R  Y  S+VQ
Sbjct: 150 ELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQ 209

Query: 121 IFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLAD 180
           I TL +       +WRS+GK  +  V+ S    VN +LH V+   RH   R  +SFDL D
Sbjct: 210 ILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLED 269

Query: 181 KQFXEIPKSELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 208
           ++F EIPK + G L+R ++  V L  CL AV Y      +IWVMK YG KE
Sbjct: 270 EEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKE 320

[Close]

BLAST of MC06g0983 vs. NCBI nr
Match: XP_022140713.1 (F-box protein At3g07870 [Momordica charantia])

HSP 1 Score: 219 bits (559), Expect = 2.10e-66
Identity = 133/222 (59.91%), Postives = 148/222 (66.67%), Query Frame = 0


Query: 2   HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF      ++P+K     F  +M  YDVVG  + L CLS+SLY  K FIY PFTR
Sbjct: 94  HLYFVDFPAFRHDKEPVKRVFTPFSAAMPEYDVVGSCNGLLCLSDSLYNDKLFIYNPFTR 153

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PKTKEF NP VV GI FHPQT      KIVYS GFRR   I+RYS  HS+VQIFT
Sbjct: 154 DYLELPKTKEFLNPDVVCGIGFHPQTKQFKVLKIVYSRGFRR---IKRYSSHHSEVQIFT 213

Query: 122 LGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LGTSNWRSIGK       G     VN +LH VSL  R++LGRSL+SFDLAD+QF EIPK 
Sbjct: 214 LGTSNWRSIGKICHHLAQGQSQAVVNGRLHWVSLPRRYHLGRSLVSFDLADEQFREIPKP 273

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           E G+LSRC+YH VILD CL A AY      EIWVMKEYG  E
Sbjct: 274 EFGSLSRCNYHLVILDGCLSAAAYCSYGKMEIWVMKEYGVXE 312

[Close]

BLAST of MC06g0983 vs. NCBI nr
Match: TYK11886.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (504), Expect = 1.59e-58
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 62  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 121

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 122 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 181

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK 
Sbjct: 182 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDLASEEFIDIPKP 241

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 242 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 279

[Close]

BLAST of MC06g0983 vs. NCBI nr
Match: XP_008455966.1 (PREDICTED: F-box protein At3g07870 [Cucumis melo])

HSP 1 Score: 198 bits (504), Expect = 2.79e-58
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 84  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 143

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 144 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 203

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK 
Sbjct: 204 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDLASEEFIDIPKP 263

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 264 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 301

[Close]

BLAST of MC06g0983 vs. NCBI nr
Match: KAA0053295.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 4.48e-58
Identity = 114/222 (51.35%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 62  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 121

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 122 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 181

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFD+A ++F +IPK 
Sbjct: 182 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDVASEEFIDIPKP 241

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 242 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 279

[Close]

BLAST of MC06g0983 vs. NCBI nr
Match: XP_004140601.3 (F-box protein At3g07870 [Cucumis sativus])

HSP 1 Score: 195 bits (495), Expect = 3.54e-57
Identity = 113/222 (50.90%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY    FIY PFTR
Sbjct: 62  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNENLFIYNPFTR 121

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+K+F NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 122 DYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 181

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LGTSNWRSIG+          P+ +N +LH VSL  RH +GR+++SFDLA ++F +IPK 
Sbjct: 182 LGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYVGRTIVSFDLASEEFIDIPKP 241

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  + L++CL AV Y      EIWVM++YG KE
Sbjct: 242 DYGSLSRCNFQLMNLNDCLSAVVYCSYGKMEIWVMEQYGVKE 279

[Close]

BLAST of MC06g0983 vs. ExPASy TrEMBL
Match: A0A6J1CIM5 (F-box protein At3g07870 OS=Momordica charantia OX=3673 GN=LOC111011311 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 1.01e-66
Identity = 133/222 (59.91%), Postives = 148/222 (66.67%), Query Frame = 0


Query: 2   HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF      ++P+K     F  +M  YDVVG  + L CLS+SLY  K FIY PFTR
Sbjct: 94  HLYFVDFPAFRHDKEPVKRVFTPFSAAMPEYDVVGSCNGLLCLSDSLYNDKLFIYNPFTR 153

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PKTKEF NP VV GI FHPQT      KIVYS GFRR   I+RYS  HS+VQIFT
Sbjct: 154 DYLELPKTKEFLNPDVVCGIGFHPQTKQFKVLKIVYSRGFRR---IKRYSSHHSEVQIFT 213

Query: 122 LGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LGTSNWRSIGK       G     VN +LH VSL  R++LGRSL+SFDLAD+QF EIPK 
Sbjct: 214 LGTSNWRSIGKICHHLAQGQSQAVVNGRLHWVSLPRRYHLGRSLVSFDLADEQFREIPKP 273

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           E G+LSRC+YH VILD CL A AY      EIWVMKEYG  E
Sbjct: 274 EFGSLSRCNYHLVILDGCLSAAAYCSYGKMEIWVMKEYGVXE 312

[Close]

BLAST of MC06g0983 vs. ExPASy TrEMBL
Match: A0A5D3CN80 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00420 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 7.70e-59
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 62  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 121

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 122 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 181

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK 
Sbjct: 182 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDLASEEFIDIPKP 241

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 242 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 279

[Close]

BLAST of MC06g0983 vs. ExPASy TrEMBL
Match: A0A1S3C1Q1 (F-box protein At3g07870 OS=Cucumis melo OX=3656 GN=LOC103496029 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 1.35e-58
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 84  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 143

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 144 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 203

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK 
Sbjct: 204 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDLASEEFIDIPKP 263

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 264 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 301

[Close]

BLAST of MC06g0983 vs. ExPASy TrEMBL
Match: A0A5A7UHY1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001070 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 2.17e-58
Identity = 114/222 (51.35%), Postives = 146/222 (65.77%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTR
Sbjct: 62  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNEKLFIYNPFTR 121

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+KEF NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 122 DYLELPKSKEFPNPDVVYGIGFHPQTKHLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 181

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFD+A ++F +IPK 
Sbjct: 182 LGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYLGRTIVSFDVASEEFIDIPKP 241

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  +IL++CL AV Y      EIWVM++YG K+
Sbjct: 242 DYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVMEQYGVKD 279

[Close]

BLAST of MC06g0983 vs. ExPASy TrEMBL
Match: A0A0A0KA51 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109800 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 2.99e-57
Identity = 113/222 (50.90%), Postives = 144/222 (64.86%), Query Frame = 0


Query: 2   HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTR 61
           HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY    FIY PFTR
Sbjct: 84  HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNENLFIYNPFTR 143

Query: 62  DX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRRVRWIERYSYLHSKVQIFT 121
           D  E PK+K+F NP VVYGI FHPQT      KIVYS GFRR++   R+   HS+VQ+FT
Sbjct: 144 DYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVYSKGFRRIQ--RRFH--HSEVQVFT 203

Query: 122 LGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKS 181
           LGTSNWRSIG+          P+ +N +LH VSL  RH +GR+++SFDLA ++F +IPK 
Sbjct: 204 LGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYVGRTIVSFDLASEEFIDIPKP 263

Query: 182 ELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 207
           + G+LSRC++  + L++CL AV Y      EIWVM++YG KE
Sbjct: 264 DYGSLSRCNFQLMNLNDCLSAVVYCSYGKMEIWVMEQYGVKE 301

[Close]

BLAST of MC06g0983 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 87/231 (37.66%), Postives = 116/231 (50.22%), Query Frame = 0


Query: 1   HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDX 60
           H L L +       K     F  SM  +DVVG  + L CLS+SLY    ++Y PF T   
Sbjct: 90  HFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSL 149

Query: 61  ERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR-----VRWIERYSYLHSKVQ 120
           E P+ + ++ +  +V+G  FH  T      KIVY  G         R   R  Y  S+VQ
Sbjct: 150 ELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQ 209

Query: 121 IFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLAD 180
           I TL +       +WRS+GK  +  V+ S    VN +LH V+   RH   R  +SFDL D
Sbjct: 210 ILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLED 269

Query: 181 KQFXEIPKSELGTLSRCSYHSVILDECLFAVAYLRENG-EIWVMKEYGAKE 208
           ++F EIPK + G L+R ++  V L  CL AV Y      +IWVMK YG KE
Sbjct: 270 EEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKE 320

The following BLAST results are available for this feature:

BLAST of MC06g0983 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFC7	1.8e-25	37.66	F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1	[more]

BLAST of MC06g0983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140713.1	2.10e-66	59.91	F-box protein At3g07870 [Momordica charantia]	[more]
TYK11886.1	1.59e-58	51.80	F-box protein [Cucumis melo var. makuwa]	[more]
XP_008455966.1	2.79e-58	51.80	PREDICTED: F-box protein At3g07870 [Cucumis melo]	[more]
KAA0053295.1	4.48e-58	51.35	F-box protein [Cucumis melo var. makuwa]	[more]
XP_004140601.3	3.54e-57	50.90	F-box protein At3g07870 [Cucumis sativus]	[more]

BLAST of MC06g0983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIM5	1.01e-66	59.91	F-box protein At3g07870 OS=Momordica charantia OX=3673 GN=LOC111011311 PE=4 SV=1	[more]
A0A5D3CN80	7.70e-59	51.80	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00420 ...	[more]
A0A1S3C1Q1	1.35e-58	51.80	F-box protein At3g07870 OS=Cucumis melo OX=3656 GN=LOC103496029 PE=4 SV=1	[more]
A0A5A7UHY1	2.17e-58	51.35	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001070...	[more]
A0A0A0KA51	2.99e-57	50.90	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109800 PE=4 ...	[more]

BLAST of MC06g0983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07870.1	1.3e-26	37.66	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31790:SF355	SUBFAMILY NOT NAMED	coord: 15..204
None	No IPR available	PANTHER	PTHR31790	OS02G0783600 PROTEIN	coord: 15..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0983.1	MC06g0983.1	mRNA