MC06g0917 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0917
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	lamin-like protein
Location	MC06: 7723532 .. 7727775 (+)
RNA-Seq Expression	MC06g0917
Synteny	MC06g0917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTCTCTCCGAACTTTAGTCCTTATCCTCGTCAAGAGGGTTGAAGGAGTACTGATCTTCCGTTCTTTCTCTTCAAATTTTCTCTTATAAGAGAGGATTGATTTAATTTTGTGGGGGAGGAACAAAGAGAGGACAGATGAAGATCATACAAAAAATACAAGAGGAAATATGGGGAGGAAAGAGCACACAAAAACAGATAGATAAGAGATCTCTCCAGGTTTCCTTTTAACTAAATTTTCTTTTCTCAATTGGTGTATTGTCACTCTTCTAATTCAATTCCAGTTGAACTCAACATTCATTAGAAGTTTTGAATTTTCTTTACATGTTTATTACTCTCCTTTCAAATCGGTGAAATGCATGCCATTATTTTCAATATTAAATAAGGGAGATTATTAAATTCTATTTTACATTATTGTTTGTATTTGATTTTGTTATGCATTGTAACTCGATTCTCTATAATATTAGTTTCATTTATTATTAGTATTGATTTGTATTTGGTTTTTCTATTAATTTTACAATATGTTTGGCTAGTGTGTCGTTCGTCCATATTATTAATTTGAATTTCGATTCTTTCTAGTTTTCAAAATTACAGACAATATGGAGAAACTAACCTGATGTGTTTTGTTTTAATTCCATAATTATCTTTCTAAGTTAGAAAATAAATTGAAAAAAAAAACAAATACTTTATTTGTAGAGGTTGTGCAGTGTTGCTTTTTGTGAAAATCTTATAAATACATGAATTTACTCACCAAATTTAATTACAAAATTTCAATAAACCAATTTGTTAATAAAAAATGAAAAAAATATGAGTAGTGTTCTCGTCAGTCTTCATTACCGAGAGAAAAAGTAGTGTTCTTATTATGATTTTTGTTGAATTTCATTAATTCAAGACAATAAAATAAATTAAAAATGAATTTTAAAAGTCACTCACAAATTTTTAAAAAGCCACAAATGGATTCAGCAGTATTCTTTTTTGGAATTTAATATTTCAAAAAGCCTTAAATACATGAATAACTGCTCCAAAAGATTCAACAAACGGATTTAGAAGATAAAATTTTGATTTGGTGTTGTAGGGTAACCCTACTTTTCTTTATCTTTATCTTACACACAAAAGACTTCCGAACTACATCCTCAAAATGATTGGTGACGACTCCAAAATTCTTGTCCTTGAATAGAGGACGTCGAGATCATGTCGTGAAAGCTTTGAAAAAACAAACAGTGAAAGAAAGGGAGAACATGGGCCAAAAAGTAACGAATATTTTTATAAATACATATTTGAAAAAGCATATATTTATAAAAACAAAAAGTAACATTTTTTTAATAACAATTAATGTTATTTCTATAATTACATACTTATTTTATTTGTTTTATGTAATTTAGTATACTAAAACGATTAATGGGATGAAAGAAAAAATGTGCCAAGATTTTGGGATAGGAGGGATTTTTAGTAACATGAATTTTTTAAGAAAGAAAAAAAAAACTGTTCAAATTATACTTTATTACAACAAATAAAATAACCAAATTTCTCTTTTAGCTTGGAGTTCTATTAAGTGAAATTTGAAAGAAGAAATCCTAAAGTGAAAATCAAATTTCGGCATTAGGAGATGAAAATGTGAATGAAAAAAATAATTAAAAAAAAATAATAGAAAGACATAGCTTACCTATGGCTGGTGAGTTCAAATAAAATGTGAATGAGAAGAAATGAAAAAAAAAATCTTATGGACAAAAATAAAAATCCTAAAATAAAAGAAAAAAGAATAAAAATACATCAATAAATATATTTGAAAAATATTTTCACATACTATAATTGTAAATATTTTCCTTTTAGAGTATATTCCTAATATTTACTTTATTATATTTATACGCAATTGGCATAAATTTAGTAAGTATTTACAATAGTGCCACTAATTTAAAAGGAATTTACAACCATGACCCATGACTCTAGTGGCATAAATTTACTTTATTAGATTTATACGCAATTGGCATAAATTTACCATGCCACGTTTTAAGAAGATTTAGGTTTATAAAACCAATGAGCAAAAGGGCATAATAGGTAATCTTAATATAAATTCGGTTTATAAAACCCCTTTCAAAATAGCCAAAAATGCAAAATTAAGAATATTTAGGTTAAAATTTCAGGAAAAAATAATGTCTCTTGACCAGCTAAATTAGTTGAGTTATATATATTTAGGTCAATAGGGGATAATTTCTACTTTTTTTTTTCACCGTTGAACAAGACTTTTTATTAGTATTTTGATTATCGGTAAATTATGTTGGAATTTTTTTTTGTTTGTTTAATTAAAAATCTAATTTCGAGTACTATGTGGTATGTTGAGCTCGTAGAGTTCTTTCACCAACTTAATTTTGTAGCTAAAGTTAGGACATTTTTACGATATATTTTTGTGTTTTATTTGTTGTGATTCTGGAAAAAATTTCATATCGTAGTTTTGACTCACATATTAATTTCACTACTTATTCAAATTTAAATTTAAATTTAAATTTTATGAAATTAATTTTGTTTGATTTCTATTTTTTATTTTTTACATGATGAGGCAGTAAAAAAGGGAGGGGGAGAAATTAACATTGTGGAAAATTTAGTCATTCCAAATAACATTCAACTGATTTTTTGTACAACGTCTTCATGCAAATATGGTTTCAGCCCTCAATTGCATGAAAATGCATGAGATTTTGGTTGTTAGTTTCAGAATAAAATTTTGGTCCTTTTTTATTCTTCATTTTTAGGGTTTCCTCCACACCCATCTTCCCTTGATCTGCTTGATCACCTTTCAAATTCAAGTAGCTGAAGAGATATGTTTGGGATCGTCATGGCAGAGGCGGTGGCAATGGTGGCGCTCGGGTGGTTGTTGTGTGGAGTTGAGGGTAGAGATCCGATGCTCCATAGGGTTGGAGGAGGAAAATACACTTGGGCGCCTAATGTTAACTTCACTGATTGGTCGATTCACGAGCACTTCTACGTTGGTGATTGGCTTTGTAAGTTTTTTAGTTTCTTTACTCTCTCTGAAACGGATCAAATTTGTTCTTACCCCTCTCATATGGACAATCCGAACATAGCTTAGTGAATAAGACACGTATTACCTTTCTTTAAGATGGATGTTACATATTTCGATCTTCTACGTACTCTGATCACAATACGGGTCAAATCTTTCTCTCTCAATTTTTATATAGGTCACATCTCTCTCACTGTTCAAAGATTGTATATATAAAGACTAGCAAGGCCTAGGGGGTGGAATTGGTCATTTTTCATATAAAATTAGGGTTAGAGAAGTCAAATATTTAGGTTTCCCATTTGTAAGGTCAATTCCTTTTACCTAATCAAATCATTTCCCATTTTGAATATATAATATTACGCAACCATTGAACTCCAATATTTCTATAAACAGCGTATATACAGTTCAAAGATTTGAACTTTGAAGTCAATAAAAAAAAATCATCATTTGGCTCTCAAATATGTAGCTAGGCATATAATTTTTAAAGATCAATATACTTCATATAGTTTATTTTGGTAAAGATAAAAGATCGCGTTTCTCGATCCTAACGTGATGAAATCATATACTTATATGACGTTTTTCTTTTTTTTTACCTTTTTTATTTCTGGGTCTTTTCAGATTTTGGGTTCGATAAGCATATCTACAACGTGCTGGAAGTGAACGAGACGAGCTACGAGAGTTGCAACGAGAAGGATTTCATTTTCAACATCACAAGGGGAGGCAGAGATGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGGAGAGGCTTTTGCTATCAAGGAATGAAACTTGCTGTTTTTGTTGAAGAATCTCCTCCAAATAATAATTCACCACCAAATCTCCCCAAAATGTCCAACCTCTCTCCATCTATATTACAACCACTATTTTCTCTCCCCCTCTTGCTATTCACCATTATTGCTAATTTTATTTCCTTCTTCTAAGATTTAGGGTTAATCTTGATTATATGTTGATTAGGGCTAGGTTTAGAATCCTAACTATAGTTTTGAGTTGCCAAAGTTGATGAAAATAAAAAGGATTATTAAAGCCGATTATGTCGGTAATTAGCTAGGGTTTAGGGTTTAGGGATACGGATAGGACTGTGTTGAAGTTTTTGAGCTTCTTGATTTGTTATAAATTTTTAAGTTTGTATTGTTCGAAACAGTGGAATAAAAGTATTTTTGATTACGATATTTGAATTTTTGTTTTATTGATGAAGATTATA

mRNA sequence

AAAATTCTCTCCGAACTTTAGTCCTTATCCTCGTCAAGAGGGTTGAAGGAGTACTGATCTTCCGTTCTTTCTCTTCAAATTTTCTCTTATAAGAGAGGATTGATTTAATTTTGTGGGGGAGGAACAAAGAGAGGACAGATGAAGATCATACAAAAAATACAAGAGGAAATATGGGGAGGAAAGAGCACACAAAAACAGATAGATAAGAGATCTCTCCAGGGTTTCCTCCACACCCATCTTCCCTTGATCTGCTTGATCACCTTTCAAATTCAAGTAGCTGAAGAGATATGTTTGGGATCGTCATGGCAGAGGCGGTGGCAATGGTGGCGCTCGGGTGGTTGTTGTGTGGAGTTGAGGGTAGAGATCCGATGCTCCATAGGGTTGGAGGAGGAAAATACACTTGGGCGCCTAATGTTAACTTCACTGATTGGTCGATTCACGAGCACTTCTACGTTGGTGATTGGCTTTATTTTGGGTTCGATAAGCATATCTACAACGTGCTGGAAGTGAACGAGACGAGCTACGAGAGTTGCAACGAGAAGGATTTCATTTTCAACATCACAAGGGGAGGCAGAGATGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGGAGAGGCTTTTGCTATCAAGGAATGAAACTTGCTGTTTTTGTTGAAGAATCTCCTCCAAATAATAATTCACCACCAAATCTCCCCAAAATGTCCAACCTCTCTCCATCTATATTACAACCACTATTTTCTCTCCCCCTCTTGCTATTCACCATTATTGCTAATTTTATTTCCTTCTTCTAAGATTTAGGGTTAATCTTGATTATATGTTGATTAGGGCTAGGTTTAGAATCCTAACTATAGTTTTGAGTTGCCAAAGTTGATGAAAATAAAAAGGATTATTAAAGCCGATTATGTCGGTAATTAGCTAGGGTTTAGGGTTTAGGGATACGGATAGGACTGTGTTGAAGTTTTTGAGCTTCTTGATTTGTTATAAATTTTTAAGTTTGTATTGTTCGAAACAGTGGAATAAAAGTATTTTTGATTACGATATTTGAATTTTTGTTTTATTGATGAAGATTATA

Coding sequence (CDS)

ATGTTTGGGATCGTCATGGCAGAGGCGGTGGCAATGGTGGCGCTCGGGTGGTTGTTGTGTGGAGTTGAGGGTAGAGATCCGATGCTCCATAGGGTTGGAGGAGGAAAATACACTTGGGCGCCTAATGTTAACTTCACTGATTGGTCGATTCACGAGCACTTCTACGTTGGTGATTGGCTTTATTTTGGGTTCGATAAGCATATCTACAACGTGCTGGAAGTGAACGAGACGAGCTACGAGAGTTGCAACGAGAAGGATTTCATTTTCAACATCACAAGGGGAGGCAGAGATGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGGAGAGGCTTTTGCTATCAAGGAATGAAACTTGCTGTTTTTGTTGAAGAATCTCCTCCAAATAATAATTCACCACCAAATCTCCCCAAAATGTCCAACCTCTCTCCATCTATATTACAACCACTATTTTCTCTCCCCCTCTTGCTATTCACCATTATTGCTAATTTTATTTCCTTCTTCTAA

Protein sequence

MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF

Homology

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BLAST of MC06g0917 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.2e-26
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 10  VAMVALGWLLCG-VEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHI 69
           +  V L +L+   + G     + VG  K+ W PN+N+T W+  +HFY+GDWLYF FD++ 
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 67

Query: 70  YNVLEVNETSYESCNEKDFIFNITRG-GRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVE 129
           +N+LEVN+T YE C     I N TRG GRD+  L Q K YY L G+G CY GMKL+V VE
Sbjct: 68  HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 127

Query: 130 ESPPNNNSPPNLPKMSNL-SPSILQPL--FSLPLLLFTIIA 166
           + PP    PP    + N+ S S++  L  F +P+ LF   A
Sbjct: 128 KLPP----PPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPA 163

[Close]

BLAST of MC06g0917 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.9e-10
Identity = 39/122 (31.97%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 33  GGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNIT 92
           G G +   P  N+  WS    F V D LYF + K   +VLEVN+  Y++CN K+ I  + 
Sbjct: 35  GSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVD 94

Query: 93  RGGRDVFNLTQAKPYYFLSG-RGFCYQGMKL-AVFVEESPPNNNSPPNLPKMSNLSPSIL 152
            G  ++ +L +  P+YF+SG    C +G KL  V +    P+    P+     + +P  +
Sbjct: 95  DGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGSM 154

[Close]

BLAST of MC06g0917 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.1e-07
Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 29  LHRVGGGK-YTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDF 88
           +H+VG    +T     ++  W+    F+VGD L F ++   +NVL+V++  ++SCN    
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 89  IFNITRGGRDVFNLTQAKPYYFLSG-RGFCYQGMKLAVFVE 128
             + T  G D   L +   +YFL G  G C  G K+ + V+
Sbjct: 63  AASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]

BLAST of MC06g0917 vs. NCBI nr
Match: XP_022157364.1 (lamin-like protein [Momordica charantia])

HSP 1 Score: 355 bits (910), Expect = 1.39e-123
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL 60
           MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL
Sbjct: 1   MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL 60

Query: 61  YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM 120
           YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM
Sbjct: 61  YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM 120

Query: 121 KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF 171
           KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF
Sbjct: 121 KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF 171

[Close]

BLAST of MC06g0917 vs. NCBI nr
Match: XP_038880463.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 250 bits (638), Expect = 3.77e-82
Identity = 121/156 (77.56%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MFGIVM---AEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVG 60
           MFG+ +      VAM   GWLL G EGR P+LHRVGGGKYTW  N+NFTDWSIHEHFYVG
Sbjct: 1   MFGMAVEAVTTVVAMAVAGWLLFGAEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCY 120
           DWLYFGFDKHIYNVLEVN+TSYESCN+K FIFN+TRGGRDVFNLT+AK YYFLSGRGFC+
Sbjct: 61  DWLYFGFDKHIYNVLEVNKTSYESCNDKGFIFNLTRGGRDVFNLTEAKTYYFLSGRGFCF 120

Query: 121 QGMKLAVFVEESPPNNNSPPNLPKMSNLSPSILQPL 153
           QGMK+AVFVEESPP   SPPNLP + N SPS LQPL
Sbjct: 121 QGMKVAVFVEESPPIV-SPPNLPNLPNHSPS-LQPL 154

[Close]

BLAST of MC06g0917 vs. NCBI nr
Match: XP_008451094.1 (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 246 bits (629), Expect = 1.73e-80
Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MFGIVMAEAVA--MVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGD 60
           MFG+     +   +V +GWLLCGVEG+ P+LH VGGGKYTW  N+NFTDWSIHEHFYVGD
Sbjct: 1   MFGMAAKVVITTVVVVVGWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHFYVGD 60

Query: 61  WLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQ 120
           WLYFGFDKHIYNVLEVN+TSYE+CN+KDFIFNIT+GGRDVFNLT+AK YYFLSGRGFC+Q
Sbjct: 61  WLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCFQ 120

Query: 121 GMKLAVFVEE---SPPNNNSPPNLPKMS-NLSPSILQPL 153
           GMK+AVFVEE    PP   SPPNLPK + NLSPS L+PL
Sbjct: 121 GMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPS-LKPL 158

[Close]

BLAST of MC06g0917 vs. NCBI nr
Match: XP_022960973.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 242 bits (618), Expect = 4.95e-79
Identity = 116/158 (73.42%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 5   VMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGF 64
           V   AV +   GWLL GVEGR+P+LHRVGGGKYTW  NVNFTDWSIHEHFYVGDWLYFGF
Sbjct: 11  VTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70

Query: 65  DKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAV 124
           DK IYNVL+VN+TSY+SCNE DF+FN+TRGGRDVFNLTQAKPYYFLSGRGFC+QGMK+A+
Sbjct: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130

Query: 125 FVEESPPNNNSPPNLPKMSNLSPSI--LQPLFSLPLLL 160
           FVE+SPP ++     PK+SN S SI  L+PL SL +L+
Sbjct: 131 FVEDSPPISS-----PKISNHSSSIQPLKPLSSLSVLI 163

[Close]

BLAST of MC06g0917 vs. NCBI nr
Match: KAG7023887.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242 bits (617), Expect = 7.03e-79
Identity = 116/158 (73.42%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 5   VMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGF 64
           V   AV +   GWLL GVEGR+P+LHRVGGGKYTW  NVNFTDWSIHEHFYVGDWLYFGF
Sbjct: 11  VTTVAVIVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70

Query: 65  DKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAV 124
           DK IYNVL+VN+TSY+SCNE DF+FN+TRGGRDVFNLTQAKPYYFLSGRGFC+QGMK+A+
Sbjct: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130

Query: 125 FVEESPPNNNSPPNLPKMSNLSPSI--LQPLFSLPLLL 160
           FVE+SPP ++     PK+SN S SI  L+PL SL +L+
Sbjct: 131 FVEDSPPISS-----PKVSNHSSSIQPLKPLSSLSVLI 163

[Close]

BLAST of MC06g0917 vs. ExPASy TrEMBL
Match: A0A6J1DWA4 (lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111024085 PE=4 SV=1)

HSP 1 Score: 355 bits (910), Expect = 6.75e-124
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL 60
           MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL
Sbjct: 1   MFGIVMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWL 60

Query: 61  YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM 120
           YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM
Sbjct: 61  YFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGM 120

Query: 121 KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF 171
           KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF
Sbjct: 121 KLAVFVEESPPNNNSPPNLPKMSNLSPSILQPLFSLPLLLFTIIANFISFF 171

[Close]

BLAST of MC06g0917 vs. ExPASy TrEMBL
Match: A0A1S3BQT0 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103492474 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 8.38e-81
Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MFGIVMAEAVA--MVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGD 60
           MFG+     +   +V +GWLLCGVEG+ P+LH VGGGKYTW  N+NFTDWSIHEHFYVGD
Sbjct: 1   MFGMAAKVVITTVVVVVGWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHFYVGD 60

Query: 61  WLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQ 120
           WLYFGFDKHIYNVLEVN+TSYE+CN+KDFIFNIT+GGRDVFNLT+AK YYFLSGRGFC+Q
Sbjct: 61  WLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCFQ 120

Query: 121 GMKLAVFVEE---SPPNNNSPPNLPKMS-NLSPSILQPL 153
           GMK+AVFVEE    PP   SPPNLPK + NLSPS L+PL
Sbjct: 121 GMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPS-LKPL 158

[Close]

BLAST of MC06g0917 vs. ExPASy TrEMBL
Match: A0A6J1HAJ6 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111461613 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 2.40e-79
Identity = 116/158 (73.42%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 5   VMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGF 64
           V   AV +   GWLL GVEGR+P+LHRVGGGKYTW  NVNFTDWSIHEHFYVGDWLYFGF
Sbjct: 11  VTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGF 70

Query: 65  DKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAV 124
           DK IYNVL+VN+TSY+SCNE DF+FN+TRGGRDVFNLTQAKPYYFLSGRGFC+QGMK+A+
Sbjct: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130

Query: 125 FVEESPPNNNSPPNLPKMSNLSPSI--LQPLFSLPLLL 160
           FVE+SPP ++     PK+SN S SI  L+PL SL +L+
Sbjct: 131 FVEDSPPISS-----PKISNHSSSIQPLKPLSSLSVLI 163

[Close]

BLAST of MC06g0917 vs. ExPASy TrEMBL
Match: A0A6J1JLN0 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485528 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 3.13e-77
Identity = 112/156 (71.79%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 5   VMAEAVAMVALGWLLCGVEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGF 64
           V    V +   GWLL GV+GR P+LHRVGGGKYTW  N+NFTDWSIHEHFYVGDWLYFGF
Sbjct: 11  VTTVVVVVTMAGWLLGGVDGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGF 70

Query: 65  DKHIYNVLEVNETSYESCNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAV 124
           DK IYNVL+VN+TSY+SCNE DF+FN+TRGGRDVFNLTQAKPYYFLSGRGFC+QGMK+A+
Sbjct: 71  DKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAI 130

Query: 125 FVEESPPNNNSPPNLPKMSNLSPSI--LQPLFSLPL 158
           FVE+SPP ++     PK++N S SI  L+PL SL L
Sbjct: 131 FVEDSPPISS-----PKIANHSSSIQPLKPLSSLSL 161

[Close]

BLAST of MC06g0917 vs. ExPASy TrEMBL
Match: A0A2P6QEZ3 (Putative cupredoxin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0049891 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 4.89e-64
Identity = 85/110 (77.27%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 22  VEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYES 81
           VE R+P+LHRVGGG++TWAP++NFTDWS  EHFYVGDWLYFGFDKHIYNVLEVN TSYE+
Sbjct: 28  VESREPVLHRVGGGRFTWAPDINFTDWSSKEHFYVGDWLYFGFDKHIYNVLEVNRTSYEN 87

Query: 82  CNEKDFIFNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVEESPP 131
           C +K++I+N+TRGGRDVFNLT+AK YYFL GRG+CY+GMK+AVFVE++PP
Sbjct: 88  CFDKEYIYNVTRGGRDVFNLTEAKTYYFLGGRGYCYKGMKVAVFVEQTPP 137

[Close]

BLAST of MC06g0917 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38
Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 29  LHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFI 88
           LHRVGGG+YTW  +VNF+DW+ H+ FY GDWLYFGF++  +N+L+VN++SYE C + D+I
Sbjct: 27  LHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQCVDNDYI 86

Query: 89  FNITRGGRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVEESPPNNNSPPNLPKMSNLSPS 148
           FNITRGGRDVF L + KPYYF+ GRG+C +GMKLA+ V   PP  ++P N    S  +P 
Sbjct: 87  FNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQPP-PSAPTNF--TSTTTPL 146

Query: 149 ILQPLFSLPLLLFTIIA 166
           I     +  +L+F   A
Sbjct: 147 IPPNAITAAILIFAFKA 160

[Close]

BLAST of MC06g0917 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 10  VAMVALGWLLCG-VEGRDPMLHRVGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHI 69
           +  V L +L+   + G     + VG  K+ W PN+N+T W+  +HFY+GDWLYF FD++ 
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 67

Query: 70  YNVLEVNETSYESCNEKDFIFNITRG-GRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVE 129
           +N+LEVN+T YE C     I N TRG GRD+  L Q K YY L G+G CY GMKL+V VE
Sbjct: 68  HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 127

Query: 130 ESPPNNNSPPNLPKMSNL-SPSILQPL--FSLPLLLFTIIA 166
           + PP    PP    + N+ S S++  L  F +P+ LF   A
Sbjct: 128 KLPP----PPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPA 163

[Close]

BLAST of MC06g0917 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 56/109 (51.38%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 32  VGGGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNI 91
           VG  K+ W PN+N+T W+  +HFY+ DWLYF ++++ YNV+EVNET+Y SCN  + I N 
Sbjct: 29  VGDNKF-WNPNINYTIWAQDKHFYLDDWLYFVYERNQYNVIEVNETNYISCNPNNPIANW 88

Query: 92  TRG-GRDVFNLTQAKPYYFLSGR-GFCYQGMKLAVFVEESPPNNNSPPN 139
           +RG GRD+ +L   + YY +SG  G CY GMKLAV VE+ PP   + PN
Sbjct: 89  SRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVEKPPPPPAAAPN 136

[Close]

BLAST of MC06g0917 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 56/108 (51.85%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 34  GGKYTWAPNVNFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITR 93
           G K  W PN+N+T W+  +HFYVGDWLYF F +  +N+LEVN+  YE C     I N TR
Sbjct: 32  GDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYTR 91

Query: 94  G-GRDVFNLTQAKPYYFLSGRGFCYQGMKLAVFVEESPPNNNSPPNLP 141
           G GRD+  L + + YY L GRG C QGMKL V VE  PP    PP  P
Sbjct: 92  GAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPPP---PPPFTP 136

[Close]

BLAST of MC06g0917 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12
Identity = 41/88 (46.59%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 54  FYVGDWLYFGFDKHIYNVLEVNETSYESCNEKDFIFNITRG-GRDVFNLTQAKPYYFLSG 113
           F+    L F F +  +N+LEVN+  YE C     I N TRG GRD+  L + + YY L G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 114 RGFCYQGMKLAVFVEESPPNNNSPPNLP 141
           RG C QGMKL V VE  PP    PP  P
Sbjct: 74  RGGCVQGMKLDVLVETPPP---PPPFTP 98

The following BLAST results are available for this feature:

BLAST of MC06g0917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	5.2e-26	44.10	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q9T076	8.9e-10	31.97	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
P80728	7.1e-07	30.69	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of MC06g0917 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157364.1	1.39e-123	100.00	lamin-like protein [Momordica charantia]	[more]
XP_038880463.1	3.77e-82	77.56	lamin-like protein [Benincasa hispida]	[more]
XP_008451094.1	1.73e-80	74.84	PREDICTED: lamin-like protein [Cucumis melo]	[more]
XP_022960973.1	4.95e-79	73.42	lamin-like protein [Cucurbita moschata]	[more]
KAG7023887.1	7.03e-79	73.42	Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MC06g0917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWA4	6.75e-124	100.00	lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111024085 PE=4 SV=1	[more]
A0A1S3BQT0	8.38e-81	74.84	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103492474 PE=4 SV=1	[more]
A0A6J1HAJ6	2.40e-79	73.42	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111461613 PE=4 SV=1	[more]
A0A6J1JLN0	3.13e-77	71.79	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485528 PE=4 SV=1	[more]
A0A2P6QEZ3	4.89e-64	77.27	Putative cupredoxin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0049891 PE=4 SV=...	[more]

BLAST of MC06g0917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27035.1	3.6e-38	53.28	early nodulin-like protein 20	[more]
AT5G15350.1	3.7e-27	44.10	early nodulin-like protein 17	[more]
AT3G01070.1	1.2e-25	51.38	early nodulin-like protein 16	[more]
AT4G12880.1	1.3e-24	51.85	early nodulin-like protein 19	[more]
AT4G12880.2	2.6e-12	46.59	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 28..130 e-value: 8.6E-24 score: 85.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..126
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..120 e-value: 6.0E-17 score: 61.4
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 28..128 score: 28.535849
None	No IPR available	PANTHER	PTHR33021:SF262	EARLY NODULIN-LIKE PROTEIN 20	coord: 10..135
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 10..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0917.1	MC06g0917.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity