MC06g0911 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0911
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L30
LocationMC06: 7663266 .. 7666727 (+)
RNA-Seq ExpressionMC06g0911
SyntenyMC06g0911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGACCCGATAACCCAAAGACTTACCCTAAACCACTGGCCGTTTCTCTCTCTATATATTCTTTGAAATTAGGGTTTCTAGTGTTCTTTAACCATTCTCGTCGGCGAGCTGCAGCTTTCTCATCTCCTCAACAATGGTGGCCGCCAAGAAGACCGTAAGTTTCTCTCCTTCTACCCTCACTTTCCTCCTCTGCGGCTTAGTGTTGGGACTAGTTTCTATTGAATCTCATTTGGTTCTGATTAAGGAGGAATAGCGAACCGGCGATTCAGATTTTTCCTTCGATTTTCGTTTTGCGTTTGCTAATTCTTGGCGAGGGCTGACATTTTTCTTGTTGTGATGATTTTAACAGAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAATCTGTTGTTGAAGTTTTTTCATCTGATCCGATCTCTGGACTTGTCTCGATGGATGGGAGTTTATTCGTTGTTTAATCAGCTCATTAGGTGGTTTTTCCTTTACTAATTTTCGGTTGATTATTTAGTTGATTAGTTGTATCTTAGCGAGGGTTGGTTTTGACTGAAATTACTGAAACCGTAGATCAAAATCTGGTCCCAAGTCACAAATAATTAATTTTATGTTTTTCGATCGTAAACTTGTTGCCTACAACATTCAACCCATTGACGAGATTCTTCGGTTTGGCAAAATAATCTTTCATGTTAATTGAGATTGGGGTTATTCTTGGCCTCGGAATTGATCTCGATTTGGGTCACTAGCATTATTTCAAATTACTATGTTTCTGTATTTGCTTCCAGCAGGGATGAGATCCGTAGCATCTTATTTGTTATCCATGTTTCTATACCTGAGTGTTTACATTTGAGTTTATATCTGTTTTTATGTTTGCAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGTAAGTTCCTGTTCTGTTTAATAATGAACTGGACTGACCCTTTATTTTTCGTACTACATTTCAATTTCTTTGGCACTCAATATAAGAGCATGTATCCATCTACTTACATGTTGTATTCTGAATGAAAAGTTCAAATTGTTTTCATCCTGATTGCAGATATGATATCAAGCTAGAATTGTTAGATTTCTTAATGGTCTTTTCCTGTTTAACATGAGCATTTGCTGCCACATATCACTAATGTGTTCATTTTTTTTGACTGTTTATCGCTTTTCTTGTGTGGCATCTTTTGTTTTTGATCTAAAGCTGATTTTCTTAATTCTGAAAGACTTGTAAACTGATTTTTATTTTTATGTTTTCAGGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTACACTTTTCTCTGATCAAGTTTCTGTTTTTGGACGACCTCCCTTGCGTAACGTTTTGATTGTGGAATTTGAATGGCTTTCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAGGTTGCAACTTCCTCTCAGATCATAGATTTTTGTTTTGAGTTTCTTTTTAATCCACTTGATTTTGGGTTGGATGTTAGTGACGTTTTTGCTTGTGAGGCATGTTATTATTGATCAAATGGTTTCATTATAAACTTTTTTATGTATGAGATCTTATTCCAGAGAACTTTGATATCATTATTTTGATGTTCCAATTACCTATGTCAATTAGAAGCATGTTGTCACCAAATGTTTATTTTAGTATTGATTAATTCTGCTTCTTCAATTGGTTCGTCGCTCGAATCTCGGCTTAACTAGATGTAAGAGTAGTTTTAAATCACTTTAAAACACAATCTCTTCATGCAGATGCAGTTGAAATCTGGAGATTTCTTTTTGTGATGGTTTCGGCTGAACACTTGTTTGAAGAAGAATTAACTTTAAGTATTGGAGTCTTTTTAAGAAGTGTTAGAAGAAATACAACATCTTTAAGCATTAGATTCTTAAGGGCATAATTTAAGTTGTGTATTTTAGTAATGTACTTGTTCCTCTTTTTTTTAATTTTAGTTTCTCGTTTTTTTAATTTTTGTTATTAGAACGTTACGTAGTTGTTTTTGTTTTTGATTTTTTTAGAAGGTAGGAATTTTATATACAACACAACCAAATCAAGTTTTTTTCTTTCTTATCTTCAGCTTTTTTTCTAAGCAAATTAAAATAATACTTCATCATTTTGACTTGTATGATGCATGATTAATATTTATAAGTTATGTATATGTTTTTATTTATTTTGAAAAAGAGTAAACAAGAACCAATAAATGAAAACATTATCAAATGAGATCATATTTATCGGAACAAGTGCCCTTAATTCAAGGCAGATAAGGCCATGAACCAAAAGAGATTTTTGTAATAAAAAAAGTAAAAACCACCGTATGATTTCATTCAATTATAAAAAAGTTATCTTTTATTAAGAGGGTACGATGAGGAAAAAAAACCCAAATAAGCATTCAAAACTTCAAAATGTTGGAATATGATTGGCATTTTAAAAGTTACAAAGGTTCAATTACTTATAATTAAAAAAATGAAATTAGATCTACAATCTACTATACCATAGAGTTTATCCTTTCCAAAAGAGTTGAAAAAATTATATAAAATTTAAAATTGATTTAAACTTGTGAATACATGCCATTGGGCTATATTTAATTATTTATATAAATTTAAAAATTTGTTTGAAAATTATATAATAATAAAATTAAATTAGGGGAAATTAAGAAAGGAAGTATATTTAAAAAGAAGAAAATAATTGTAAAATATAAACTTGTAAATATTTATGTGAACGGTATATATTAGTTAATTTTTTCCATGCAAGATATAGATTTGACAATTACTGTGATAAGAAAAGGTATTGGAAGAAAATGTGAATATTAATTTAAAACTCATGAATTAATAAATTGTAATCATACTTGTTTAATAACAATCTTCTCATTCATAATTTAATTTTAAAATTCAAGCCCAATTTTAAAAACAAAGAGTCAACAATTTTATTTTTCTGCATCTAATATTAATACATGTTGATTAATAATTTTATTAATTTTCTAACCTCTATATCTATATCTATCTATAATATATTAAAAAATACGGATGTGGAAGAAACATTTTTTTTGGACAATATTAACCCTTGCTTCTTTTGTAATATACAAATTATCTTTCTCTTCAATTTATGTCTCTCTCATCCATGGCTCTTCTTTTTTATATGATACTCTCCTATCTTTTCTCATTTATCTATCCCTTATTTAATTATAATTTTCTTCTCTCGTTAACTTGAAAAGCTAAGAATATAAAAAATTTTGTCTTTAATTTTAAAATTACATTTTTTTACTTTTAATTAGG

mRNA sequence

CCCGACCCGATAACCCAAAGACTTACCCTAAACCACTGGCCGTTTCTCTCTCTATATATTCTTTGAAATTAGGGTTTCTAGTGTTCTTTAACCATTCTCGTCGGCGAGCTGCAGCTTTCTCATCTCCTCAACAATGGTGGCCGCCAAGAAGACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAGG

Coding sequence (CDS)

ATGGTGGCCGCCAAGAAGACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAG

Protein sequence

MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES
Homology
[Close]
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-56
Identity = 104/111 (93.69%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSI+DPGDSDIIK++PG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111

[Close]
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-54
Identity = 101/111 (90.99%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESIN+RLALVMKSGK+TLGYKTVL++LR++KGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RVCCLSIID GDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 8.9e-51
Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PG+
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-50
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

[Close]
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: O48558 (60S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-50
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVA KKTKK+ ++INN+L LVMKSGKYTLGYKTVL+TLRNSK KL+IIANNCPPLRKSEI
Sbjct: 1   MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKV VHH++G+NVDLGTACGKY+RVCCLSIIDPGDSDIIK+ PGE
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111

[Close]
BLAST of MC06g0911 vs. NCBI nr
Match: XP_022960585.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023515547.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7022349.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228 bits (580), Expect = 3.59e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]
BLAST of MC06g0911 vs. NCBI nr
Match: XP_038878626.1 (60S ribosomal protein L30 [Benincasa hispida])

HSP 1 Score: 227 bits (579), Expect = 5.10e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGES 112

[Close]
BLAST of MC06g0911 vs. NCBI nr
Match: XP_022157366.1 (60S ribosomal protein L30 [Momordica charantia])

HSP 1 Score: 227 bits (578), Expect = 1.60e-74
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]
BLAST of MC06g0911 vs. NCBI nr
Match: XP_022925483.1 (60S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal protein L30 [Cucurbita maxima] >XP_023529418.1 60S ribosomal protein L30 [Cucurbita pepo subsp. pepo] >KAG6588153.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022046.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225 bits (574), Expect = 2.96e-74
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+S
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 112

[Close]
BLAST of MC06g0911 vs. NCBI nr
Match: XP_006340286.1 (PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum])

HSP 1 Score: 224 bits (572), Expect = 5.97e-74
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 111

[Close]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1JJ11 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.74e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1H9H7 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.74e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1DXV1 (60S ribosomal protein L30 OS=Momordica charantia OX=3673 GN=LOC111024087 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 7.73e-75
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1HXQ4 (60S ribosomal protein L30 OS=Cucurbita maxima OX=3661 GN=LOC111467784 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 1.43e-74
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+S
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 112

[Close]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A2N9FM19 (Ribosomal_L7Ae domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16095 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 1.43e-74
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKL+IIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]
BLAST of MC06g0911 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.3e-52
Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PG+
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]
BLAST of MC06g0911 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 200.3 bits (508), Expect = 8.3e-52
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

[Close]
BLAST of MC06g0911 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 91/111 (81.98%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVH YNG+NVDLGTACGKY+RV CLSI+DPGDSDIIK++PG+
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111

The following BLAST results are available for this feature:
BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498841.9e-5693.6960S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
Q9M5M66.6e-5490.9960S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
Q9C8F78.9e-5184.68Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
Q8VZ191.2e-5084.6860S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
O485582.6e-5084.6860S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1[more]
BLAST of MC06g0911 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960585.13.59e-7599.1160S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosoma... [more]
XP_038878626.15.10e-7599.1160S ribosomal protein L30 [Benincasa hispida][more]
XP_022157366.11.60e-74100.0060S ribosomal protein L30 [Momordica charantia][more]
XP_022925483.12.96e-7498.2160S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal pro... [more]
XP_006340286.15.97e-7498.20PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum][more]
BLAST of MC06g0911 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JJ111.74e-7599.1160S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 ... [more]
A0A6J1H9H71.74e-7599.1160S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=... [more]
A0A6J1DXV17.73e-75100.0060S ribosomal protein L30 OS=Momordica charantia OX=3673 GN=LOC111024087 PE=3 SV... [more]
A0A6J1HXQ41.43e-7498.2160S ribosomal protein L30 OS=Cucurbita maxima OX=3661 GN=LOC111467784 PE=3 SV=1[more]
A0A2N9FM191.43e-7498.20Ribosomal_L7Ae domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU... [more]
BLAST of MC06g0911 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G36240.16.3e-5284.68Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT1G77940.18.3e-5284.68Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT3G18740.12.0e-5081.98Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 2.3E-24
score: 84.9
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 2..108
e-value: 3.9E-54
score: 182.8
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..106
NoneNo IPR availablePANTHERPTHR11449:SF2360S RIBOSOMAL PROTEIN L30coord: 1..112
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..112
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
IPR000231Ribosomal protein L30eHAMAPMF_00481Ribosomal_L30ecoord: 12..109
score: 21.5208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0911.1MC06g0911.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome