MC06g0806 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0806
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
LocationMC06: 6738202 .. 6739384 (-)
RNA-Seq ExpressionMC06g0806
SyntenyMC06g0806
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGGTCTCTCCCTTTCTCTTTCTTTAACTTTCTTTAATTTCCACGACGAGTTTCGGAGCCCTAATTTCGATTTAGACTTCATCTCTCTCGATCCATCACCATTCTTCGCAGATGCCGAAGAATTCGCTTATTTTATTTCTTTAATTCTCTTTAATTTCCACGAAGATTTCCGGAGCCCTAATCTCTTGATCGATCGCCATTCTTCGCAGATGTTGAAGAATTCGTTCGGCAGTGCGATCTCGGTCAGTTCTCCCTCTCTCGGCCCTATCTCTCAAGATTTTGCGTCTGTTTCTGACATTGGCTACCTGATGAGGTTCAGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGTACTCAATTTCTCCATTCTCTGCTTCAATTTTTGTTGATTCGCCTTTTTTCTCTTTTTTGATCTTTGAAGTTTTATTTATTTCTATTTTTGTCCTTAAATCTTAATTTTGGCACTGTGATTCTTATTAAAATTTTGGTTTAGTTCATCCCTAACTCAATTCTAACTTCCTTCCCAACTCCAAGCCTAATCTAAATCCATTTTTCTACCAAAGAAAACATTCTAAATCCAGTCTACTTGAACAAAGATATGTTCTAAAAAATTTTAGAAGTTGGTGCAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCCCAAGACCATGGCGAGGGCAATGGAAACCAAAGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAA

mRNA sequence

ACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCCCAAGACCATGGCGAGGGCAATGGAAACCAAAGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAA

Coding sequence (CDS)

ACGGTGAAGAAGGTCTTCCAGGATTTCTTGGGACGACGAACCAGCATTGTCAAAGCTCTCACCCTCGAGGAAGAAGATGAAGTTTGCCTGTACGGACTTCCCGACGGAGAATGGAGAGTACGGAGTGCGTCTACGAAGGCAGCGACGAATCCGAGGCCAGAGCCTGCATCAGGAATTAACTTCGCGAGAGATGATCGGACTCAATTAAAGGACTGGTTGTTCCTTGTAGCTGCTCTTAGCGATGCTTGGTTGCTCTCTCTGGCCTTCTACAACGGTGCCTGTTATTTCGACAGAGTTCAGAGGCAATGCTTGTTTGGTATGATAAACGACATTCCCACAATACTGGAGACCATAACTAGAAGATACAAGTCTAGAAAGCCTCCCAAGACCATGGCGAGGGCAATGGAAACCAAAGAGGAAGATAATGAGATATGTGGGAGTTGTGAAAAGAAACCTAACCCAAACCAGAAAGAGTTTTGGATTTGTTGCGACTTTTGCGACACTTGGTTTCATGGCCAATGCGTAAAAATCACTCCTGATCAATCCACACAAATTCACAACTATAAGTGCCCATCCTGTAGTTACAAA

Protein sequence

TVKKVFQDFLGRRTSIVKALTLEEEDEVCLYGLPDGEWRVRSASTKAATNPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMINDIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK
Homology
BLAST of MC06g0806 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-45
Identity = 105/239 (43.93%), Postives = 139/239 (58.16%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRRT+IVKALT +          E++ +CLYGLP+ EW V   + +    
Sbjct: 12  TVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPE 71

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD  ++ K+WL LVA  SDAWLLS++FY G+ + F + +R+ LF MIN
Sbjct: 72  -LPEPALGINFARDGLSE-KEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMIN 131

Query: 121 DIPTILETIT----------------RRYKSRKPPKT----MARAMETKEEDNEI----- 180
           D+PTI E +T                 + KS    +T     ++  + KEED EI     
Sbjct: 132 DVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDE 191

Query: 181 -------CGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 197
                  CG+C      +  EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 192 DDHGETLCGACGDSDGAD--EFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 246

BLAST of MC06g0806 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.4e-43
Identity = 101/242 (41.74%), Postives = 135/242 (55.79%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           T + VF+DF  RR  ++KALT +          E++ +CLYGLP+  W V   + +    
Sbjct: 9   TPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPPE 68

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   + KDWL LVA  SD WLL++AFY GA + FD+  R+ LF MIN
Sbjct: 69  -LPEPALGINFARDGMDE-KDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMIN 128

Query: 121 DIPTILETIT---RRYKSRKPPKTMARA-------------------------------- 180
           ++PTI E +T   ++    K PKT  ++                                
Sbjct: 129 NLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPKDEDDSGGE 188

Query: 181 METKEEDNE--ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPS 195
            E +EED+E  +CG+C    N  Q EFWICCD C+TWFHG+CVKITP ++  I +YKCP+
Sbjct: 189 EEEEEEDHENTLCGAC--GDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPN 246

BLAST of MC06g0806 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.4e-43
Identity = 101/242 (41.74%), Postives = 135/242 (55.79%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           T + VF+DF  RR  ++KALT +          E++ +CLYGLP+  W V   + +    
Sbjct: 9   TPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPPE 68

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   + KDWL LVA  SD WLL++AFY GA + FD+  R+ LF MIN
Sbjct: 69  -LPEPALGINFARDGMDE-KDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMIN 128

Query: 121 DIPTILETIT---RRYKSRKPPKTMARA-------------------------------- 180
           ++PTI E +T   ++    K PKT  ++                                
Sbjct: 129 NLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPKDEDDSGGE 188

Query: 181 METKEEDNE--ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPS 195
            E +EED+E  +CG+C    N  Q EFWICCD C+TWFHG+CVKITP ++  I +YKCP+
Sbjct: 189 EEEEEEDHENTLCGAC--GDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPN 246

BLAST of MC06g0806 vs. ExPASy Swiss-Prot
Match: B8B8C5 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.9e-42
Identity = 102/254 (40.16%), Postives = 132/254 (51.97%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLEEED----------EVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  +V+ALT + ED           +CLYG P+  W V   + +    
Sbjct: 9   TVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPE 68

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL +VA  SDAWLLS+AFY GA + FD+  R+ LFGMIN
Sbjct: 69  -LPEPALGINFARDG-MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMIN 128

Query: 121 DIPTILETITRRYKSRKPP---------------------------------KTMARAME 180
           D+PTI E ++ + K++ P                                  K   R  E
Sbjct: 129 DLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEE 188

Query: 181 TKEEDNE----------------ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPD 195
              +D E                +CG+C +    +  EFWICCD C+ WFHG+CVKITP 
Sbjct: 189 GGPDDEEGGGGGGGGREEEHGETLCGACGESYGAD--EFWICCDICEKWFHGKCVKITPA 248

BLAST of MC06g0806 vs. ExPASy Swiss-Prot
Match: Q6YTY3 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.7e-42
Identity = 102/255 (40.00%), Postives = 132/255 (51.76%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLEEED----------EVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  +V+ALT + ED           +CLYG P+  W V   + +    
Sbjct: 9   TVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPE 68

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL +VA  SDAWLLS+AFY GA + FD+  R+ LFGMIN
Sbjct: 69  -LPEPALGINFARDG-MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMIN 128

Query: 121 DIPTILETITRRYKSRKPP---------------------------------KTMARAME 180
           D+PTI E ++ + K++ P                                  K   R  E
Sbjct: 129 DLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEE 188

Query: 181 TKEEDNE-----------------ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITP 195
              +D E                 +CG+C +    +  EFWICCD C+ WFHG+CVKITP
Sbjct: 189 GGPDDEEGGGGGGGGGREEEHGETLCGACGESYGAD--EFWICCDICEKWFHGKCVKITP 248

BLAST of MC06g0806 vs. NCBI nr
Match: XP_022147579.1 (PHD finger protein ALFIN-LIKE 3-like [Momordica charantia])

HSP 1 Score: 410 bits (1054), Expect = 5.00e-144
Identity = 195/207 (94.20%), Postives = 196/207 (94.69%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTL-----------EEEDEVCLYGLPDGEWRVRSASTKAAT 60
           TVKKVFQDFLGRRTSIVKALTL           EEEDEVCLYGLPDGEWRVRSASTKAAT
Sbjct: 7   TVKKVFQDFLGRRTSIVKALTLDVEEFVRQCDLEEEDEVCLYGLPDGEWRVRSASTKAAT 66

Query: 61  NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN 120
           NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN
Sbjct: 67  NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN 126

Query: 121 DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICCDFCDTW 180
           DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSC+KKPNPNQKEFWICCDFCDTW
Sbjct: 127 DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCDKKPNPNQKEFWICCDFCDTW 186

Query: 181 FHGQCVKITPDQSTQIHNYKCPSCSYK 196
           FHGQCVKITPDQSTQIHNYKCPSCSYK
Sbjct: 187 FHGQCVKITPDQSTQIHNYKCPSCSYK 213

BLAST of MC06g0806 vs. NCBI nr
Match: XP_022962096.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata] >XP_023546199.1 PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194 bits (494), Expect = 5.93e-59
Identity = 104/223 (46.64%), Postives = 138/223 (61.88%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P    A+A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. NCBI nr
Match: XP_022951576.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 193 bits (490), Expect = 2.39e-58
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKTTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. NCBI nr
Match: KAG6585765.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193 bits (490), Expect = 2.39e-58
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. NCBI nr
Match: XP_022997243.1 (PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 193 bits (490), Expect = 2.39e-58
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. ExPASy TrEMBL
Match: A0A6J1D1F2 (PHD finger protein ALFIN-LIKE 3-like OS=Momordica charantia OX=3673 GN=LOC111016472 PE=3 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 2.42e-144
Identity = 195/207 (94.20%), Postives = 196/207 (94.69%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTL-----------EEEDEVCLYGLPDGEWRVRSASTKAAT 60
           TVKKVFQDFLGRRTSIVKALTL           EEEDEVCLYGLPDGEWRVRSASTKAAT
Sbjct: 7   TVKKVFQDFLGRRTSIVKALTLDVEEFVRQCDLEEEDEVCLYGLPDGEWRVRSASTKAAT 66

Query: 61  NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN 120
           NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN
Sbjct: 67  NPRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACYFDRVQRQCLFGMIN 126

Query: 121 DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCEKKPNPNQKEFWICCDFCDTW 180
           DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSC+KKPNPNQKEFWICCDFCDTW
Sbjct: 127 DIPTILETITRRYKSRKPPKTMARAMETKEEDNEICGSCDKKPNPNQKEFWICCDFCDTW 186

Query: 181 FHGQCVKITPDQSTQIHNYKCPSCSYK 196
           FHGQCVKITPDQSTQIHNYKCPSCSYK
Sbjct: 187 FHGQCVKITPDQSTQIHNYKCPSCSYK 213

BLAST of MC06g0806 vs. ExPASy TrEMBL
Match: A0A6J1HC47 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462656 PE=3 SV=1)

HSP 1 Score: 194 bits (494), Expect = 2.87e-59
Identity = 104/223 (46.64%), Postives = 138/223 (61.88%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P    A+A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. ExPASy TrEMBL
Match: A0A6J1KDA9 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492205 PE=3 SV=1)

HSP 1 Score: 193 bits (490), Expect = 1.16e-58
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLEEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. ExPASy TrEMBL
Match: A0A6J1GHY6 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454350 PE=3 SV=1)

HSP 1 Score: 193 bits (490), Expect = 1.16e-58
Identity = 103/223 (46.19%), Postives = 137/223 (61.43%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKTTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. ExPASy TrEMBL
Match: A0A6J1KTZ5 (PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496393 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.64e-58
Identity = 103/223 (46.19%), Postives = 136/223 (60.99%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF DF GRR  ++KALT +          E++ +CLYG P  +W V   + +    
Sbjct: 11  TVEEVFMDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPE 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDWL LVA  SD WLLS+AFY GA + FD+  R+ LF MIN
Sbjct: 71  -LPEPALGINFARDGM-QEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 130

Query: 121 DIPTILETIT---RRYKSRKPPKTMARAMETKEEDNE-------------ICGSCEKKPN 180
           D+PTI E +T   ++ +S +P     +A+++K+ED E             +CG+C +  N
Sbjct: 131 DLPTIFEVVTGTAKKQRSSEPQIKSTKAVQSKDEDEEGLDEEDEEEHGETLCGACGE--N 190

Query: 181 PNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 196
               EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 191 YASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 229

BLAST of MC06g0806 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-46
Identity = 105/239 (43.93%), Postives = 139/239 (58.16%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRRT+IVKALT +          E++ +CLYGLP+ EW V   + +    
Sbjct: 12  TVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPE 71

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD  ++ K+WL LVA  SDAWLLS++FY G+ + F + +R+ LF MIN
Sbjct: 72  -LPEPALGINFARDGLSE-KEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMIN 131

Query: 121 DIPTILETIT----------------RRYKSRKPPKT----MARAMETKEEDNEI----- 180
           D+PTI E +T                 + KS    +T     ++  + KEED EI     
Sbjct: 132 DVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDE 191

Query: 181 -------CGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 197
                  CG+C      +  EFWICCD C+ WFHG+CVKITP ++  I  YKCPSCS K
Sbjct: 192 DDHGETLCGACGDSDGAD--EFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNK 246

BLAST of MC06g0806 vs. TAIR 10
Match: AT2G02470.2 (alfin-like 6 )

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43
Identity = 99/237 (41.77%), Postives = 133/237 (56.12%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF DF GRR  ++KALT +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDW+ LVA  SD+WLLS+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 130

Query: 121 DIPTILETITRRYKSRK------------------------PPKTMARAMETKEEDNE-- 180
           ++PTI E ++   K  K                        PPK      +  E+++E  
Sbjct: 131 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKVAKMSSPPPKEEEEEEDESEDESEDD 190

Query: 181 ----ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCSYK 197
               +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKCP+CS K
Sbjct: 191 EQGAVCGAC--GDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNK 243

BLAST of MC06g0806 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 171.0 bits (432), Expect = 9.4e-43
Identity = 97/239 (40.59%), Postives = 132/239 (55.23%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF DF GRR  ++KAL+ +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDW+ LVA  SD+WL+S+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 130

Query: 121 DIPTILETITRRYKSRK--------------------------------PPKTMARAMET 180
           D+PTI E +T   K  K                                PP+    + + 
Sbjct: 131 DLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDE 190

Query: 181 KEEDNE--ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKCPSCS 195
            E+D +  +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKCPSC+
Sbjct: 191 DEDDEQGAVCGAC--GDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCT 245

BLAST of MC06g0806 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 99/246 (40.24%), Postives = 133/246 (54.07%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLE----------EEDEVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF DF GRR  ++KALT +          E++ +CLYGLP+  W V +   +    
Sbjct: 11  TVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV-NLPVEEVPP 70

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q KDW+ LVA  SD+WLLS+AFY GA + F + +R+ LF MIN
Sbjct: 71  ELPEPALGINFARDG-MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 130

Query: 121 DIPTILETITRRYKSRK---------------------------------PPKTMARAME 180
           ++PTI E ++   K  K                                 PPK      +
Sbjct: 131 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEED 190

Query: 181 TKEEDNE------ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHNYKC 197
             E+++E      +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +YKC
Sbjct: 191 ESEDESEDDEQGAVCGAC--GDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKC 250

BLAST of MC06g0806 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 168.7 bits (426), Expect = 4.7e-42
Identity = 99/249 (39.76%), Postives = 134/249 (53.82%), Query Frame = 0

Query: 1   TVKKVFQDFLGRRTSIVKALTLEEED----------EVCLYGLPDGEWRVRSASTKAATN 60
           TV++VF+DF GRR  I++ALT + ED           +CLYG P+  W V   + +    
Sbjct: 12  TVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWEVNLPAEEVPPE 71

Query: 61  PRPEPASGINFARDDRTQLKDWLFLVAALSDAWLLSLAFYNGACY-FDRVQRQCLFGMIN 120
             PEPA GINFARD   Q ++WL LVA  SDAWLLS++FY G+ + FDR  R+ LF MIN
Sbjct: 72  -LPEPALGINFARDG-MQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMIN 131

Query: 121 DIPTILETIT--------------RRYKSRKPPKTMARAMETK----------------- 180
           ++PT+ E +T               +  +R    +  R +E+K                 
Sbjct: 132 EVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLELE 191

Query: 181 ----EEDNE-------ICGSCEKKPNPNQKEFWICCDFCDTWFHGQCVKITPDQSTQIHN 197
               EED +       +CG+C    N    EFWICCD C+ WFHG+CVKITP ++  I +
Sbjct: 192 EGEEEEDEDEDEHGETLCGAC--GDNYASDEFWICCDMCEKWFHGECVKITPARAEHIKH 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M2B43.4e-4543.93PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1[more]
B8BJV85.4e-4341.74PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35... [more]
Q2R8375.4e-4341.74PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11... [more]
B8B8C55.9e-4240.16PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26... [more]
Q6YTY37.7e-4240.00PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07... [more]
Match NameE-valueIdentityDescription
XP_022147579.15.00e-14494.20PHD finger protein ALFIN-LIKE 3-like [Momordica charantia][more]
XP_022962096.15.93e-5946.64PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata] >XP_0235461... [more]
XP_022951576.12.39e-5846.19PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita moschata][more]
KAG6585765.12.39e-5846.19PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022997243.12.39e-5846.19PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1D1F22.42e-14494.20PHD finger protein ALFIN-LIKE 3-like OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1HC472.87e-5946.64PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KDA91.16e-5846.19PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GHY61.16e-5846.19PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KTZ51.64e-5846.19PHD finger protein ALFIN-LIKE 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT3G42790.12.4e-4643.93alfin-like 3 [more]
AT2G02470.21.9e-4341.77alfin-like 6 [more]
AT1G14510.19.4e-4340.59alfin-like 7 [more]
AT2G02470.12.1e-4240.24alfin-like 6 [more]
AT5G20510.14.7e-4239.76alfin-like 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 144..194
e-value: 1.6E-9
score: 47.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 134..194
e-value: 2.8E-20
score: 73.5
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 144..194
e-value: 4.8E-9
score: 36.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 142..196
score: 8.9649
IPR021998Alfin, N-terminalPFAMPF12165Alfincoord: 1..119
e-value: 1.9E-34
score: 118.2
IPR045104AlfinPANTHERPTHR12321CPG BINDING PROTEINcoord: 1..196
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 145..193
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 125..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0806.1MC06g0806.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0042393 histone binding
molecular_function GO:0046872 metal ion binding