MC06g0771 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0771
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Prenylated rab acceptor PRA1
Location	MC06: 6397236 .. 6397418 (-)
RNA-Seq Expression	MC06g0771
Synteny	MC06g0771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATGTCTACACCAAGTGGGAAAGAACGATTCTCTGGGACATGGTCGATCCGTATAGGCGACCCAAATCGTTTACGCCGTTGGTTTCCATCTATATTGCAGCTTTTTACTCCGGGGTCGTCGGCGCCGCCATCACTGAGCAACTCTACAAG

mRNA sequence

ATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATGTCTACACCAAGTGGGAAAGAACGATTCTCTGGGACATGGTCGATCCGTATAGGCGACCCAAATCGTTTACGCCGTTGGTTTCCATCTATATTGCAGCTTTTTACTCCGGGGTCGTCGGCGCCGCCATCACTGAGCAACTCTACAAG

Coding sequence (CDS)

ATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATGTCTACACCAAGTGGGAAAGAACGATTCTCTGGGACATGGTCGATCCGTATAGGCGACCCAAATCGTTTACGCCGTTGGTTTCCATCTATATTGCAGCTTTTTACTCCGGGGTCGTCGGCGCCGCCATCACTGAGCAACTCTACAAG

Protein sequence

MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLYK

Homology

[Close]

BLAST of MC06g0771 vs. ExPASy Swiss-Prot
Match: Q94K18 (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-20
Identity = 41/59 (69.49%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3  SYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLYK 62
          S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L++IY+AAFY+GV+GAA+TEQLYK
Sbjct: 6  SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYK 64

[Close]

BLAST of MC06g0771 vs. NCBI nr
Match: XP_022147559.1 (uncharacterized protein At4g29660 [Momordica charantia])

HSP 1 Score: 131 bits (329), Expect = 5.19e-38
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. NCBI nr
Match: XP_038878275.1 (uncharacterized protein At4g29660 [Benincasa hispida])

HSP 1 Score: 130 bits (326), Expect = 1.49e-37
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. NCBI nr
Match: KAG7023654.1 (hypothetical protein SDJN02_14680 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (320), Expect = 4.51e-37
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. NCBI nr
Match: XP_022961093.1 (uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharacterized protein At4g29660 [Cucurbita maxima] >XP_023516486.1 uncharacterized protein At4g29660 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127 bits (320), Expect = 1.22e-36
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. NCBI nr
Match: XP_008450847.1 (PREDICTED: uncharacterized protein At4g29660 [Cucumis melo])

HSP 1 Score: 126 bits (317), Expect = 3.51e-36
Identity = 56/61 (91.80%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWE+T+LWDM+DPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. ExPASy TrEMBL
Match: A0A6J1D1D0 (uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 2.51e-38
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. ExPASy TrEMBL
Match: A0A6J1JKR6 (uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 5.92e-37
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. ExPASy TrEMBL
Match: A0A6J1HAW0 (uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 5.92e-37
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. ExPASy TrEMBL
Match: A0A1S3BPK6 (uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 1.70e-36
Identity = 56/61 (91.80%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWE+T+LWDM+DPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. ExPASy TrEMBL
Match: A0A0A0M1X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 4.87e-36
Identity = 56/61 (91.80%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60
          MASYLWRKYADY++TKWE+T+LWDMVDPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLFTKWEKTLLWDMVDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

[Close]

BLAST of MC06g0771 vs. TAIR 10
Match: AT4G29660.1 (embryo defective 2752 )

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-21
Identity = 41/59 (69.49%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 3  SYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLYK 62
          S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L++IY+AAFY+GV+GAA+TEQLYK
Sbjct: 6  SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYK 64

The following BLAST results are available for this feature:

BLAST of MC06g0771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K18	2.0e-20	69.49	Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=...	[more]

BLAST of MC06g0771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147559.1	5.19e-38	100.00	uncharacterized protein At4g29660 [Momordica charantia]	[more]
XP_038878275.1	1.49e-37	98.36	uncharacterized protein At4g29660 [Benincasa hispida]	[more]
KAG7023654.1	4.51e-37	95.08	hypothetical protein SDJN02_14680 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961093.1	1.22e-36	95.08	uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharact...	[more]
XP_008450847.1	3.51e-36	91.80	PREDICTED: uncharacterized protein At4g29660 [Cucumis melo]	[more]

BLAST of MC06g0771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1D0	2.51e-38	100.00	uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456...	[more]
A0A6J1JKR6	5.92e-37	95.08	uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE...	[more]
A0A6J1HAW0	5.92e-37	95.08	uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 ...	[more]
A0A1S3BPK6	1.70e-36	91.80	uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 S...	[more]
A0A0A0M1X3	4.87e-36	91.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1	[more]

BLAST of MC06g0771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29660.1	1.4e-21	69.49	embryo defective 2752	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037759	Uncharacterized protein At4g29660-like	PANTHER	PTHR37898	OS05G0540200 PROTEIN	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0771.1	MC06g0771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane